RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

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Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 ZNF720Q7Z2F6 126 aa18.9■□□□□ 0.62
SYNE3-202ENST00000553340 TPH2Q8IWU9 490 aa18.9■□□□□ 0.62
SYNE3-202ENST00000553340 FAM178BQ8IXR5 827 aa18.9■□□□□ 0.62
SYNE3-202ENST00000553340 CYP2W1Q8TAV3 490 aa18.9■□□□□ 0.62
SYNE3-202ENST00000553340 RPS6KC1Q96S38 1066 aa18.9■□□□□ 0.62
SYNE3-202ENST00000553340 TUFT1Q9NNX1 390 aa18.9■□□□□ 0.62
SYNE3-202ENST00000553340 DMAC2Q9NW81 257 aa18.9■□□□□ 0.62
SYNE3-202ENST00000553340 NYAP2Q9P242 653 aa18.9■□□□□ 0.62
SYNE3-202ENST00000553340 SEL1LQ9UBV2 794 aa18.9■□□□□ 0.62
SYNE3-202ENST00000553340 SUFUQ9UMX1 484 aa18.9■□□□□ 0.62
SYNE3-202ENST00000553340 PCDHA3Q9Y5H8 950 aa18.9■□□□□ 0.62
SYNE3-202ENST00000553340 TMEM110-MUSTN1A8MSY1 372 aa18.9■□□□□ 0.62
SYNE3-202ENST00000553340 MARCKSL1P49006 195 aa18.9■□□□□ 0.62
SYNE3-202ENST00000553340 PDE6CP51160 858 aa18.9■□□□□ 0.62
SYNE3-202ENST00000553340 SNAP25P60880 206 aa18.9■□□□□ 0.62
SYNE3-202ENST00000553340 AUHQ13825 339 aaKnown RBP18.9■□□□□ 0.62
SYNE3-202ENST00000553340 TCEAL1Q15170 157 aa18.9■□□□□ 0.62
SYNE3-202ENST00000553340 TNFAIP8L3Q5GJ75 292 aa18.9■□□□□ 0.62
SYNE3-202ENST00000553340 TCP11Q8WWU5 503 aa18.9■□□□□ 0.62
SYNE3-202ENST00000553340 HSD17B14Q9BPX1 270 aa18.9■□□□□ 0.62
SYNE3-202ENST00000553340 MTUS1Q9ULD2 1270 aa18.9■□□□□ 0.62
SYNE3-202ENST00000553340 AFF2P51816 1311 aa18.9■□□□□ 0.62
SYNE3-202ENST00000553340 GPC5P78333 572 aa18.89■□□□□ 0.62
SYNE3-202ENST00000553340 BFSP1Q12934 665 aa18.89■□□□□ 0.62
SYNE3-202ENST00000553340 RIPK1Q13546 671 aa18.89■□□□□ 0.62
SYNE3-202ENST00000553340 CNGA2Q16280 664 aa18.89■□□□□ 0.62
SYNE3-202ENST00000553340 FAM133BQ5BKY9 247 aaKnown RBP18.89■□□□□ 0.62
SYNE3-202ENST00000553340 CRELD2Q6UXH1 353 aaPredicted RBP18.89■□□□□ 0.62
SYNE3-202ENST00000553340 CCDC105Q8IYK2 499 aa18.89■□□□□ 0.62
SYNE3-202ENST00000553340 SLC20A1Q8WUM9 679 aa18.89■□□□□ 0.62
SYNE3-202ENST00000553340 MTFR1LQ9H019 292 aa18.89■□□□□ 0.62
SYNE3-202ENST00000553340 HOMER3Q9NSC5 361 aa18.89■□□□□ 0.62
SYNE3-202ENST00000553340 CLTAP09496 248 aa18.89■□□□□ 0.61
SYNE3-202ENST00000553340 SLURP2P0DP57 97 aa18.89■□□□□ 0.61
SYNE3-202ENST00000553340 ALAS1P13196 640 aa18.89■□□□□ 0.61
SYNE3-202ENST00000553340 UBAP2Q5T6F2 1119 aaKnown RBP18.89■□□□□ 0.61
SYNE3-202ENST00000553340 MFSD5Q6N075 450 aa18.89■□□□□ 0.61
SYNE3-202ENST00000553340 CDC42EP5Q6NZY7 148 aa18.89■□□□□ 0.61
SYNE3-202ENST00000553340 PNMA8AQ86V59 439 aaPredicted RBP18.89■□□□□ 0.61
SYNE3-202ENST00000553340 ART4Q93070 314 aa18.89■□□□□ 0.61
SYNE3-202ENST00000553340 TBC1D31Q96DN5 1066 aa18.89■□□□□ 0.61
SYNE3-202ENST00000553340 ROPN1BQ9BZX4 212 aaPredicted RBP18.89■□□□□ 0.61
SYNE3-202ENST00000553340 ROPN1Q9HAT0 212 aaPredicted RBP18.89■□□□□ 0.61
SYNE3-202ENST00000553340 EXOC3O60645 756 aa18.88■□□□□ 0.61
SYNE3-202ENST00000553340 COMTP21964 271 aa18.88■□□□□ 0.61
SYNE3-202ENST00000553340 MMP14P50281 582 aa18.88■□□□□ 0.61
SYNE3-202ENST00000553340 PEX5P50542 639 aa18.88■□□□□ 0.61
SYNE3-202ENST00000553340 CYFIP1Q7L576 1253 aa18.88■□□□□ 0.61
SYNE3-202ENST00000553340 TBC1D1Q86TI0 1168 aaPredicted RBP18.88■□□□□ 0.61
SYNE3-202ENST00000553340 ZDHHC14Q8IZN3 488 aa18.88■□□□□ 0.61
SYNE3-202ENST00000553340 DYDC1Q8WWB3 177 aa18.88■□□□□ 0.61
SYNE3-202ENST00000553340 FIZ1Q96SL8 496 aa18.88■□□□□ 0.61
SYNE3-202ENST00000553340 WNT8AQ9H1J5 351 aa18.88■□□□□ 0.61
SYNE3-202ENST00000553340 DBR1Q9UK59 544 aaKnown RBP18.88■□□□□ 0.61
SYNE3-202ENST00000553340 CEP83Q9Y592 693 aa18.88■□□□□ 0.61
SYNE3-202ENST00000553340 PASKQ96RG2 1323 aa18.88■□□□□ 0.61
SYNE3-202ENST00000553340 SNX3O60493 162 aa18.88■□□□□ 0.61
SYNE3-202ENST00000553340 SLITRK3O94933 977 aa18.88■□□□□ 0.61
SYNE3-202ENST00000553340 CYP3A4P08684 503 aa18.88■□□□□ 0.61
SYNE3-202ENST00000553340 IKQ13123 557 aaPredicted RBP18.88■□□□□ 0.61
SYNE3-202ENST00000553340 MESDQ14696 234 aa18.88■□□□□ 0.61
SYNE3-202ENST00000553340 CERS5Q8N5B7 392 aa18.88■□□□□ 0.61
SYNE3-202ENST00000553340 MORC4Q8TE76 937 aa18.88■□□□□ 0.61
SYNE3-202ENST00000553340 VTI1AQ96AJ9 217 aa18.88■□□□□ 0.61
SYNE3-202ENST00000553340 DYDC2Q96IM9 177 aa18.88■□□□□ 0.61
SYNE3-202ENST00000553340 UBE2TQ9NPD8 197 aaPredicted RBP18.88■□□□□ 0.61
SYNE3-202ENST00000553340 UBAP1LF5GYI3 381 aa18.87■□□□□ 0.61
SYNE3-202ENST00000553340 RIMBP2O15034 1052 aa18.87■□□□□ 0.61
SYNE3-202ENST00000553340 HOXA13P31271 388 aaPredicted RBP18.87■□□□□ 0.61
SYNE3-202ENST00000553340 COILP38432 576 aaPredicted RBP18.87■□□□□ 0.61
SYNE3-202ENST00000553340 SCNN1DP51172 638 aa18.87■□□□□ 0.61
SYNE3-202ENST00000553340 CYP1B1Q16678 543 aa18.87■□□□□ 0.61
SYNE3-202ENST00000553340 TLDC1Q6P9B6 456 aa18.87■□□□□ 0.61
SYNE3-202ENST00000553340 LMO3Q8TAP4 145 aa18.87■□□□□ 0.61
SYNE3-202ENST00000553340 COA1Q9GZY4 146 aa18.87■□□□□ 0.61
SYNE3-202ENST00000553340 ABCF3Q9NUQ8 709 aa18.87■□□□□ 0.61
SYNE3-202ENST00000553340 CETN1Q12798 172 aa18.87■□□□□ 0.61
SYNE3-202ENST00000553340 CALCOCO2Q13137 446 aa18.87■□□□□ 0.61
SYNE3-202ENST00000553340 CERKLQ49MI3 558 aaPredicted RBP18.87■□□□□ 0.61
SYNE3-202ENST00000553340 CCDC38Q502W7 563 aa18.87■□□□□ 0.61
SYNE3-202ENST00000553340 ODR4Q5SWX8 454 aa18.87■□□□□ 0.61
SYNE3-202ENST00000553340 EXOC3L1Q86VI1 746 aa18.87■□□□□ 0.61
SYNE3-202ENST00000553340 RDH13Q8NBN7 331 aa18.87■□□□□ 0.61
SYNE3-202ENST00000553340 MIEF2Q96C03 454 aa18.87■□□□□ 0.61
SYNE3-202ENST00000553340 HOOK2Q96ED9 719 aa18.87■□□□□ 0.61
SYNE3-202ENST00000553340 DNAJC18Q9H819 358 aa18.87■□□□□ 0.61
SYNE3-202ENST00000553340 PTPN22Q9Y2R2 807 aa18.87■□□□□ 0.61
SYNE3-202ENST00000553340 PYGMP11217 842 aa18.87■□□□□ 0.61
SYNE3-202ENST00000553340 GBP2P32456 591 aaPredicted RBP18.87■□□□□ 0.61
SYNE3-202ENST00000553340 ZNF131P52739 623 aa18.87■□□□□ 0.61
SYNE3-202ENST00000553340 NFIAQ12857 509 aa18.87■□□□□ 0.61
SYNE3-202ENST00000553340 TRMT10CQ7L0Y3 403 aaKnown RBP18.87■□□□□ 0.61
SYNE3-202ENST00000553340 OTOP1Q7RTM1 612 aa18.87■□□□□ 0.61
SYNE3-202ENST00000553340 CCDC25Q86WR0 208 aa18.87■□□□□ 0.61
SYNE3-202ENST00000553340 SLC13A5Q86YT5 568 aaPredicted RBP18.87■□□□□ 0.61
SYNE3-202ENST00000553340 RPUSD2Q8IZ73 545 aaKnown RBP18.87■□□□□ 0.61
SYNE3-202ENST00000553340 SYCP3Q8IZU3 236 aa18.87■□□□□ 0.61
SYNE3-202ENST00000553340 CCHCR1Q8TD31 782 aa18.87■□□□□ 0.61
SYNE3-202ENST00000553340 USP15Q9Y4E8 981 aaPredicted RBP18.87■□□□□ 0.61
SYNE3-202ENST00000553340 CD2APQ9Y5K6 639 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms