RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 TSPAN1O60635 241 aa17.65■□□□□ 0.42
CDK4-215ENST00000553237 CD2BP2O95400 341 aaKnown RBP17.65■□□□□ 0.42
CDK4-215ENST00000553237 U2AF2P26368 475 aaKnown RBP eCLIP17.65■□□□□ 0.42
CDK4-215ENST00000553237 CA8P35219 290 aa17.65■□□□□ 0.42
CDK4-215ENST00000553237 TRAPPC10P48553 1259 aa17.65■□□□□ 0.42
CDK4-215ENST00000553237 TOB1P50616 345 aaPredicted RBP17.65■□□□□ 0.42
CDK4-215ENST00000553237 AFF1P51825 1210 aaKnown RBP17.65■□□□□ 0.42
CDK4-215ENST00000553237 ZP2Q05996 745 aa17.65■□□□□ 0.42
CDK4-215ENST00000553237 MBTD1Q05BQ5 628 aa17.65■□□□□ 0.42
CDK4-215ENST00000553237 ORC2Q13416 577 aaPredicted RBP17.65■□□□□ 0.42
CDK4-215ENST00000553237 MRPL10Q7Z7H8 261 aaKnown RBP17.65■□□□□ 0.42
CDK4-215ENST00000553237 TMEM173Q86WV6 379 aaPredicted RBP17.65■□□□□ 0.42
CDK4-215ENST00000553237 TMEM169Q96HH4 297 aa17.65■□□□□ 0.42
CDK4-215ENST00000553237 TMX3Q96JJ7 454 aa17.65■□□□□ 0.42
CDK4-215ENST00000553237 C1QTNF1Q9BXJ1 281 aa17.65■□□□□ 0.42
CDK4-215ENST00000553237 EIF2AQ9BY44 585 aaKnown RBP17.65■□□□□ 0.42
CDK4-215ENST00000553237 BACH2Q9BYV9 841 aa17.65■□□□□ 0.42
CDK4-215ENST00000553237 RSAD1Q9HA92 442 aa17.65■□□□□ 0.42
CDK4-215ENST00000553237 ARID2Q68CP9 1835 aa17.65■□□□□ 0.42
CDK4-215ENST00000553237 GALTP07902 379 aa17.64■□□□□ 0.41
CDK4-215ENST00000553237 RPA1P27694 616 aa17.64■□□□□ 0.41
CDK4-215ENST00000553237 POU5F1BQ06416 359 aa17.64■□□□□ 0.41
CDK4-215ENST00000553237 NCBP1Q09161 790 aaKnown RBP17.64■□□□□ 0.41
CDK4-215ENST00000553237 MCTP1Q6DN14 999 aa17.64■□□□□ 0.41
CDK4-215ENST00000553237 LLGL2Q6P1M3 1020 aa17.64■□□□□ 0.41
CDK4-215ENST00000553237 ZNF280BQ86YH2 543 aa17.64■□□□□ 0.41
CDK4-215ENST00000553237 IFNLR1Q8IU57 520 aaPredicted RBP17.64■□□□□ 0.41
CDK4-215ENST00000553237 ADHFE1Q8IWW8 467 aa17.64■□□□□ 0.41
CDK4-215ENST00000553237 SMG8Q8ND04 991 aaKnown RBP17.64■□□□□ 0.41
CDK4-215ENST00000553237 URGCPQ8TCY9 931 aa17.64■□□□□ 0.41
CDK4-215ENST00000553237 CDCA3Q99618 268 aaPredicted RBP17.64■□□□□ 0.41
CDK4-215ENST00000553237 RNF39Q9H2S5 420 aa17.64■□□□□ 0.41
CDK4-215ENST00000553237 DNAJB4Q9UDY4 337 aa17.64■□□□□ 0.41
CDK4-215ENST00000553237 PRKAG3Q9UGI9 489 aa17.64■□□□□ 0.41
CDK4-215ENST00000553237 DBR1Q9UK59 544 aaKnown RBP17.64■□□□□ 0.41
CDK4-215ENST00000553237 PCDHB6Q9Y5E3 794 aa17.64■□□□□ 0.41
CDK4-215ENST00000553237 ARHGEF35A5YM69 484 aa17.63■□□□□ 0.41
CDK4-215ENST00000553237 LRRIQ4A6NIV6 560 aa17.63■□□□□ 0.41
CDK4-215ENST00000553237 PI4K2BG5E9Z4 385 aa17.63■□□□□ 0.41
CDK4-215ENST00000553237 B4GALT3O60512 393 aa17.63■□□□□ 0.41
CDK4-215ENST00000553237 EYA4O95677 639 aa17.63■□□□□ 0.41
CDK4-215ENST00000553237 CXCL14O95715 111 aa17.63■□□□□ 0.41
CDK4-215ENST00000553237 POMCP01189 267 aa17.63■□□□□ 0.41
CDK4-215ENST00000553237 ITGA4P13612 1032 aa17.63■□□□□ 0.41
CDK4-215ENST00000553237 NCLP19338 710 aaKnown RBP17.63■□□□□ 0.41
CDK4-215ENST00000553237 COL9A1P20849 921 aa17.63■□□□□ 0.41
CDK4-215ENST00000553237 AXLP30530 894 aa17.63■□□□□ 0.41
CDK4-215ENST00000553237 CCT6AP40227 531 aaKnown RBP17.63■□□□□ 0.41
CDK4-215ENST00000553237 SLC11A1P49279 550 aa17.63■□□□□ 0.41
CDK4-215ENST00000553237 COASYQ13057 564 aa17.63■□□□□ 0.41
CDK4-215ENST00000553237 PTGDRQ13258 359 aa17.63■□□□□ 0.41
CDK4-215ENST00000553237 ECM1Q16610 540 aa17.63■□□□□ 0.41
CDK4-215ENST00000553237 AMHR2Q16671 573 aa17.63■□□□□ 0.41
CDK4-215ENST00000553237 NOTUMQ6P988 496 aa17.63■□□□□ 0.41
CDK4-215ENST00000553237 CDR2LQ86X02 465 aaPredicted RBP17.63■□□□□ 0.41
CDK4-215ENST00000553237 VPS52Q8N1B4 723 aa17.63■□□□□ 0.41
CDK4-215ENST00000553237 MRPL43Q8N983 215 aaKnown RBP17.63■□□□□ 0.41
CDK4-215ENST00000553237 SMRP1Q8NCR6 262 aa17.63■□□□□ 0.41
CDK4-215ENST00000553237 BCL7CQ8WUZ0 217 aaPredicted RBP17.63■□□□□ 0.41
CDK4-215ENST00000553237 RSPH1Q8WYR4 309 aa17.63■□□□□ 0.41
CDK4-215ENST00000553237 IGSF21Q96ID5 467 aa17.63■□□□□ 0.41
CDK4-215ENST00000553237 CSRNP2Q9H175 543 aa17.63■□□□□ 0.41
CDK4-215ENST00000553237 POLD4Q9HCU8 107 aa17.63■□□□□ 0.41
CDK4-215ENST00000553237 LRWD1Q9UFC0 647 aa17.63■□□□□ 0.41
CDK4-215ENST00000553237 RAPGEFL1Q9UHV5 662 aa17.63■□□□□ 0.41
CDK4-215ENST00000553237 HES2Q9Y543 173 aa17.63■□□□□ 0.41
CDK4-215ENST00000553237 IPPQ9Y573 584 aa17.63■□□□□ 0.41
CDK4-215ENST00000553237 FAM86C2PA6NEL3 165 aa17.62■□□□□ 0.41
CDK4-215ENST00000553237 C2orf71A6NGG8 1288 aa17.62■□□□□ 0.41
CDK4-215ENST00000553237 C19orf67A6NJJ6 358 aa17.62■□□□□ 0.41
CDK4-215ENST00000553237 B4GALT5O43286 388 aa17.62■□□□□ 0.41
CDK4-215ENST00000553237 DDHD2O94830 711 aa17.62■□□□□ 0.41
CDK4-215ENST00000553237 ARF4P18085 180 aaPredicted RBP17.62■□□□□ 0.41
CDK4-215ENST00000553237 FXR2P51116 673 aaKnown RBP eCLIP17.62■□□□□ 0.41
CDK4-215ENST00000553237 SMC1AQ14683 1233 aaKnown RBP17.62■□□□□ 0.41
CDK4-215ENST00000553237 PCBP1Q15365 356 aaKnown RBP eCLIP17.62■□□□□ 0.417e-10■■■■□ 21.8
CDK4-215ENST00000553237 PADI6Q6TGC4 694 aa17.62■□□□□ 0.41
CDK4-215ENST00000553237 CNNM3Q8NE01 707 aa17.62■□□□□ 0.41
CDK4-215ENST00000553237 MCPH1Q8NEM0 835 aa17.62■□□□□ 0.41
CDK4-215ENST00000553237 AUTS2Q8WXX7 1259 aa17.62■□□□□ 0.41
CDK4-215ENST00000553237 FAM193BQ96PV7 902 aaPredicted RBP17.62■□□□□ 0.41
CDK4-215ENST00000553237 APOL6Q9BWW8 343 aa17.62■□□□□ 0.41
CDK4-215ENST00000553237 APOL5Q9BWW9 433 aa17.62■□□□□ 0.41
CDK4-215ENST00000553237 KIF3AQ9Y496 699 aa17.62■□□□□ 0.41
CDK4-215ENST00000553237 USP15Q9Y4E8 981 aaPredicted RBP17.62■□□□□ 0.41
CDK4-215ENST00000553237 CNTNAP2Q9UHC6 1331 aa17.62■□□□□ 0.41
CDK4-215ENST00000553237 CYP11B2P19099 503 aa17.61■□□□□ 0.41
CDK4-215ENST00000553237 GJB2P29033 226 aa17.61■□□□□ 0.41
CDK4-215ENST00000553237 KCNC3Q14003 757 aa17.61■□□□□ 0.41
CDK4-215ENST00000553237 HAUS3Q68CZ6 603 aa17.61■□□□□ 0.41
CDK4-215ENST00000553237 CCDC51Q96ER9 411 aa17.61■□□□□ 0.41
CDK4-215ENST00000553237 GAD1Q99259 594 aa17.61■□□□□ 0.41
CDK4-215ENST00000553237 NFKBIZQ9BYH8 718 aa17.61■□□□□ 0.41
CDK4-215ENST00000553237 TRIM6Q9C030 488 aaPredicted RBP17.61■□□□□ 0.41
CDK4-215ENST00000553237 KANSL3Q9P2N6 904 aa17.61■□□□□ 0.41
CDK4-215ENST00000553237 KIAA1024Q9UPX6 916 aa17.61■□□□□ 0.41
CDK4-215ENST00000553237 FSD2A1L4K1 749 aa17.6■□□□□ 0.41
CDK4-215ENST00000553237 PP2D1A8MPX8 630 aa17.6■□□□□ 0.41
CDK4-215ENST00000553237 NPTXRO95502 500 aa17.6■□□□□ 0.41
CDK4-215ENST00000553237 ALDH2P05091 517 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms