RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 ZBTB8OSQ8IWT0 167 aa20.77■□□□□ 0.92
HDAC4-217ENST00000553145 THNSL1Q8IYQ7 743 aa20.77■□□□□ 0.92
HDAC4-217ENST00000553145 KIFAP3Q92845 792 aa20.77■□□□□ 0.92
HDAC4-217ENST00000553145 PGBD4Q96DM1 585 aa20.77■□□□□ 0.92
HDAC4-217ENST00000553145 CCDC51Q96ER9 411 aa20.77■□□□□ 0.92
HDAC4-217ENST00000553145 CCDC113Q9H0I3 377 aa20.77■□□□□ 0.92
HDAC4-217ENST00000553145 NT5C3AQ9H0P0 336 aa20.77■□□□□ 0.92
HDAC4-217ENST00000553145 FZD8Q9H461 694 aa20.77■□□□□ 0.92
HDAC4-217ENST00000553145 PRMT7Q9NVM4 692 aaPredicted RBP20.77■□□□□ 0.92
HDAC4-217ENST00000553145 USP20Q9Y2K6 914 aa20.77■□□□□ 0.92
HDAC4-217ENST00000553145 HES2Q9Y543 173 aa20.77■□□□□ 0.92
HDAC4-217ENST00000553145 IPPQ9Y573 584 aa20.77■□□□□ 0.92
HDAC4-217ENST00000553145 HIP1RO75146 1068 aa20.76■□□□□ 0.91
HDAC4-217ENST00000553145 MARCKSP29966 332 aaPredicted RBP20.76■□□□□ 0.91
HDAC4-217ENST00000553145 LONP1P36776 959 aaKnown RBP20.76■□□□□ 0.91
HDAC4-217ENST00000553145 CEBPZQ03701 1054 aaKnown RBP20.76■□□□□ 0.91
HDAC4-217ENST00000553145 PPP2R5AQ15172 486 aa20.76■□□□□ 0.91
HDAC4-217ENST00000553145 NOMO2Q5JPE7 1267 aa20.76■□□□□ 0.91
HDAC4-217ENST00000553145 GLB1LQ6UWU2 654 aa20.76■□□□□ 0.91
HDAC4-217ENST00000553145 DEPTORQ8TB45 409 aa20.76■□□□□ 0.91
HDAC4-217ENST00000553145 HLA-CQ95604 372 aa20.76■□□□□ 0.91
HDAC4-217ENST00000553145 CDK5RAP3Q96JB5 506 aa20.76■□□□□ 0.91
HDAC4-217ENST00000553145 ZNF558Q96NG5 402 aa20.76■□□□□ 0.91
HDAC4-217ENST00000553145 ASB2Q96Q27 587 aa20.76■□□□□ 0.91
HDAC4-217ENST00000553145 USP28Q96RU2 1077 aa20.76■□□□□ 0.91
HDAC4-217ENST00000553145 MRPL9Q9BYD2 267 aaKnown RBP20.76■□□□□ 0.91
HDAC4-217ENST00000553145 C2orf40Q9H1Z8 148 aa20.76■□□□□ 0.91
HDAC4-217ENST00000553145 RNF39Q9H2S5 420 aa20.76■□□□□ 0.91
HDAC4-217ENST00000553145 RSAD1Q9HA92 442 aa20.76■□□□□ 0.91
HDAC4-217ENST00000553145 TBC1D13Q9NVG8 400 aa20.76■□□□□ 0.91
HDAC4-217ENST00000553145 FBXO2Q9UK22 296 aaPredicted RBP20.76■□□□□ 0.91
HDAC4-217ENST00000553145 COG5Q9UP83 839 aa20.76■□□□□ 0.91
HDAC4-217ENST00000553145 PCDHGC5Q9Y5F6 944 aa20.76■□□□□ 0.91
HDAC4-217ENST00000553145 CNTNAP2Q9UHC6 1331 aa20.76■□□□□ 0.91
HDAC4-217ENST00000553145 A0A1B0GUA9 196 aa20.75■□□□□ 0.91
HDAC4-217ENST00000553145 B4GALT3O60512 393 aa20.75■□□□□ 0.91
HDAC4-217ENST00000553145 SSBP05455 408 aaKnown RBP eCLIP20.75■□□□□ 0.91
HDAC4-217ENST00000553145 SLC12A3P55017 1021 aa20.75■□□□□ 0.91
HDAC4-217ENST00000553145 MRPS5P82675 430 aaKnown RBP20.75■□□□□ 0.91
HDAC4-217ENST00000553145 NCBP1Q09161 790 aaKnown RBP20.75■□□□□ 0.91
HDAC4-217ENST00000553145 FAM187BQ17R55 369 aa20.75■□□□□ 0.91
HDAC4-217ENST00000553145 KCTD17Q8N5Z5 321 aa20.75■□□□□ 0.91
HDAC4-217ENST00000553145 SYT2Q8N9I0 419 aaPredicted RBP20.75■□□□□ 0.91
HDAC4-217ENST00000553145 IFT74Q96LB3 600 aa20.75■□□□□ 0.91
HDAC4-217ENST00000553145 PRIMPOLQ96LW4 560 aa20.75■□□□□ 0.91
HDAC4-217ENST00000553145 COL25A1Q9BXS0 654 aaPredicted RBP20.75■□□□□ 0.91
HDAC4-217ENST00000553145 NXF3Q9H4D5 531 aaKnown RBP20.75■□□□□ 0.91
HDAC4-217ENST00000553145 ZSCAN16Q9H4T2 348 aaPredicted RBP20.75■□□□□ 0.91
HDAC4-217ENST00000553145 MYH15Q9Y2K3 1946 aa20.74■□□□□ 0.91
HDAC4-217ENST00000553145 MYO7AQ13402 2215 aa20.74■□□□□ 0.91
HDAC4-217ENST00000553145 NPTXRO95502 500 aa20.74■□□□□ 0.91
HDAC4-217ENST00000553145 PRKCBP05771 671 aa20.74■□□□□ 0.91
HDAC4-217ENST00000553145 PLA2G4BP0C869 781 aa20.74■□□□□ 0.91
HDAC4-217ENST00000553145 ITGA4P13612 1032 aa20.74■□□□□ 0.91
HDAC4-217ENST00000553145 LIG1P18858 919 aa20.74■□□□□ 0.91
HDAC4-217ENST00000553145 GUCY2CP25092 1073 aa20.74■□□□□ 0.91
HDAC4-217ENST00000553145 UBA7P41226 1012 aa20.74■□□□□ 0.91
HDAC4-217ENST00000553145 KCNQ1P51787 676 aa20.74■□□□□ 0.91
HDAC4-217ENST00000553145 PEX3P56589 373 aa20.74■□□□□ 0.91
HDAC4-217ENST00000553145 RAD51AP2Q09MP3 1159 aa20.74■□□□□ 0.91
HDAC4-217ENST00000553145 HYAL1Q12794 435 aa20.74■□□□□ 0.91
HDAC4-217ENST00000553145 KARSQ15046 597 aaKnown RBP20.74■□□□□ 0.91
HDAC4-217ENST00000553145 CSPP1Q1MSJ5 1256 aa20.74■□□□□ 0.91
HDAC4-217ENST00000553145 TJAP1Q5JTD0 557 aa20.74■□□□□ 0.91
HDAC4-217ENST00000553145 SPECC1Q5M775 1068 aa20.74■□□□□ 0.91
HDAC4-217ENST00000553145 SLC27A1Q6PCB7 646 aa20.74■□□□□ 0.91
HDAC4-217ENST00000553145 USP49Q70CQ1 688 aa20.74■□□□□ 0.91
HDAC4-217ENST00000553145 ADGRD2Q7Z7M1 963 aa20.74■□□□□ 0.91
HDAC4-217ENST00000553145 SLC39A11Q8N1S5 342 aa20.74■□□□□ 0.91
HDAC4-217ENST00000553145 SPRYD3Q8NCJ5 442 aa20.74■□□□□ 0.91
HDAC4-217ENST00000553145 CNNM3Q8NE01 707 aa20.74■□□□□ 0.91
HDAC4-217ENST00000553145 NRDE2Q9H7Z3 1164 aa20.74■□□□□ 0.91
HDAC4-217ENST00000553145 UBE2ZQ9H832 354 aaPredicted RBP20.74■□□□□ 0.91
HDAC4-217ENST00000553145 BLOC1S4Q9NUP1 217 aa20.74■□□□□ 0.91
HDAC4-217ENST00000553145 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.73■□□□□ 0.91
HDAC4-217ENST00000553145 NT5C1B-RDH14C9J2C7 533 aa20.73■□□□□ 0.91
HDAC4-217ENST00000553145 SLC26A4O43511 780 aa20.73■□□□□ 0.91
HDAC4-217ENST00000553145 ZC3H11AO75152 810 aaKnown RBP eCLIP20.73■□□□□ 0.91
HDAC4-217ENST00000553145 HSP90AA1P07900 732 aaKnown RBP20.73■□□□□ 0.91
HDAC4-217ENST00000553145 PLCG1P19174 1290 aa20.73■□□□□ 0.91
HDAC4-217ENST00000553145 GTF2F1P35269 517 aaKnown RBP eCLIP20.73■□□□□ 0.91
HDAC4-217ENST00000553145 NPTX2P47972 431 aa20.73■□□□□ 0.91
HDAC4-217ENST00000553145 BCAR1P56945 870 aa20.73■□□□□ 0.91
HDAC4-217ENST00000553145 ERVFC1P60507 584 aa20.73■□□□□ 0.91
HDAC4-217ENST00000553145 PLCB3Q01970 1234 aa20.73■□□□□ 0.91
HDAC4-217ENST00000553145 UBE3AQ05086 875 aa20.73■□□□□ 0.91
HDAC4-217ENST00000553145 COL19A1Q14993 1142 aa20.73■□□□□ 0.91
HDAC4-217ENST00000553145 MAPK6Q16659 721 aa20.73■□□□□ 0.91
HDAC4-217ENST00000553145 FOXD4L5Q5VV16 416 aaPredicted RBP20.73■□□□□ 0.91
HDAC4-217ENST00000553145 ZNF280BQ86YH2 543 aa20.73■□□□□ 0.91
HDAC4-217ENST00000553145 FOXD4L4Q8WXT5 416 aaPredicted RBP20.73■□□□□ 0.91
HDAC4-217ENST00000553145 RSPH1Q8WYR4 309 aa20.73■□□□□ 0.91
HDAC4-217ENST00000553145 CALML4Q96GE6 196 aa20.73■□□□□ 0.91
HDAC4-217ENST00000553145 CLIC6Q96NY7 704 aa20.73■□□□□ 0.91
HDAC4-217ENST00000553145 APOL6Q9BWW8 343 aa20.73■□□□□ 0.91
HDAC4-217ENST00000553145 PDZD7Q9H5P4 517 aa20.73■□□□□ 0.91
HDAC4-217ENST00000553145 DNAJB4Q9UDY4 337 aa20.73■□□□□ 0.91
HDAC4-217ENST00000553145 NPHP3-ACAD11A0A0J9YXS1 232 aa20.72■□□□□ 0.91
HDAC4-217ENST00000553145 SFI1A8K8P3 1242 aa20.72■□□□□ 0.91
HDAC4-217ENST00000553145 ACKR2O00590 384 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms