RNA–Protein interactions for RNA: ENST00000552875.2

PRKCH-203, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-203ENST00000552875 NRDE2Q9H7Z3 1164 aa9.96□□□□□ -0.82
PRKCH-203ENST00000552875 BRD9Q9H8M2 597 aa9.96□□□□□ -0.82
PRKCH-203ENST00000552875 ECHDC1Q9NTX5 307 aa9.96□□□□□ -0.82
PRKCH-203ENST00000552875 TBC1D13Q9NVG8 400 aa9.96□□□□□ -0.82
PRKCH-203ENST00000552875 TNNQ9UQP3 1299 aa9.96□□□□□ -0.82
PRKCH-203ENST00000552875 FRMPD4Q14CM0 1322 aa9.96□□□□□ -0.82
PRKCH-203ENST00000552875 C2orf16Q68DN1 1984 aa9.95□□□□□ -0.82
PRKCH-203ENST00000552875 FAM221BA6H8Z2 402 aa9.95□□□□□ -0.82
PRKCH-203ENST00000552875 SHISA7A6NL88 538 aa9.95□□□□□ -0.82
PRKCH-203ENST00000552875 MAFGO15525 162 aa9.95□□□□□ -0.82
PRKCH-203ENST00000552875 HBP1O60381 514 aa9.95□□□□□ -0.82
PRKCH-203ENST00000552875 XYLBO75191 536 aa9.95□□□□□ -0.82
PRKCH-203ENST00000552875 ZMYND10O75800 440 aa9.95□□□□□ -0.82
PRKCH-203ENST00000552875 HNRNPA1P09651 372 aaKnown RBP eCLIP9.95□□□□□ -0.82
PRKCH-203ENST00000552875 SPATA31D3P0C874 917 aa9.95□□□□□ -0.82
PRKCH-203ENST00000552875 ATXN8OSP0DMR3 200 aa9.95□□□□□ -0.82
PRKCH-203ENST00000552875 KCNA2P16389 499 aa9.95□□□□□ -0.82
PRKCH-203ENST00000552875 SLC11A1P49279 550 aa9.95□□□□□ -0.82
PRKCH-203ENST00000552875 NT5C2P49902 561 aa9.95□□□□□ -0.82
PRKCH-203ENST00000552875 SCAPQ12770 1279 aa9.95□□□□□ -0.82
PRKCH-203ENST00000552875 MTMR1Q13613 665 aa9.95□□□□□ -0.82
PRKCH-203ENST00000552875 ELF2Q15723 593 aa9.95□□□□□ -0.82
PRKCH-203ENST00000552875 SPATA31D4Q6ZUB0 917 aa9.95□□□□□ -0.82
PRKCH-203ENST00000552875 ZNF598Q86UK7 904 aaKnown RBP9.95□□□□□ -0.82
PRKCH-203ENST00000552875 IQCA1Q86XH1 822 aa9.95□□□□□ -0.82
PRKCH-203ENST00000552875 PALB2Q86YC2 1186 aa9.95□□□□□ -0.82
PRKCH-203ENST00000552875 ZNF687Q8N1G0 1237 aa9.95□□□□□ -0.82
PRKCH-203ENST00000552875 BCL7CQ8WUZ0 217 aaPredicted RBP9.95□□□□□ -0.82
PRKCH-203ENST00000552875 IRF7Q92985 503 aa9.95□□□□□ -0.82
PRKCH-203ENST00000552875 MSANTD3Q96H12 275 aa9.95□□□□□ -0.82
PRKCH-203ENST00000552875 PPP1R16BQ96T49 567 aa9.95□□□□□ -0.82
PRKCH-203ENST00000552875 VN1R3Q9BXE9 311 aa9.95□□□□□ -0.82
PRKCH-203ENST00000552875 SMOC1Q9H4F8 434 aa9.95□□□□□ -0.82
PRKCH-203ENST00000552875 JPH1Q9HDC5 661 aaPredicted RBP9.95□□□□□ -0.82
PRKCH-203ENST00000552875 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.95□□□□□ -0.82
PRKCH-203ENST00000552875 INPP5FQ9Y2H2 1132 aa9.95□□□□□ -0.82
PRKCH-203ENST00000552875 FAN1Q9Y2M0 1017 aa9.95□□□□□ -0.82
PRKCH-203ENST00000552875 COL1A2P08123 1366 aa9.95□□□□□ -0.82
PRKCH-203ENST00000552875 LAMA4Q16363 1823 aa9.95□□□□□ -0.82
PRKCH-203ENST00000552875 RALGAPA1Q6GYQ0 2036 aa9.94□□□□□ -0.82
PRKCH-203ENST00000552875 MYH7P12883 1935 aa9.94□□□□□ -0.82
PRKCH-203ENST00000552875 CCDC163A0A0D9SF12 145 aa9.94□□□□□ -0.82
PRKCH-203ENST00000552875 K7ESF4 209 aa9.94□□□□□ -0.82
PRKCH-203ENST00000552875 TGM5O43548 720 aa9.94□□□□□ -0.82
PRKCH-203ENST00000552875 CAVIN2O95810 425 aa9.94□□□□□ -0.82
PRKCH-203ENST00000552875 PRB1P04280 392 aa9.94□□□□□ -0.82
PRKCH-203ENST00000552875 EIF4BP23588 611 aaKnown RBP9.94□□□□□ -0.82
PRKCH-203ENST00000552875 LIN9Q5TKA1 542 aa9.94□□□□□ -0.82
PRKCH-203ENST00000552875 TCEAL6Q6IPX3 200 aa9.94□□□□□ -0.82
PRKCH-203ENST00000552875 MFSD6Q6ZSS7 791 aa9.94□□□□□ -0.82
PRKCH-203ENST00000552875 KBTBD6Q86V97 674 aa9.94□□□□□ -0.82
PRKCH-203ENST00000552875 TMEFF1Q8IYR6 380 aa9.94□□□□□ -0.82
PRKCH-203ENST00000552875 METTL13Q8N6R0 699 aa9.94□□□□□ -0.82
PRKCH-203ENST00000552875 LSM14AQ8ND56 463 aaKnown RBP9.94□□□□□ -0.82
PRKCH-203ENST00000552875 DEFB124Q8NES8 71 aa9.94□□□□□ -0.82
PRKCH-203ENST00000552875 SMARCC2Q8TAQ2 1214 aa9.94□□□□□ -0.82
PRKCH-203ENST00000552875 ESR2Q92731 530 aa9.94□□□□□ -0.82
PRKCH-203ENST00000552875 CUL5Q93034 780 aa9.94□□□□□ -0.82
PRKCH-203ENST00000552875 TCEAL3Q969E4 200 aa9.94□□□□□ -0.82
PRKCH-203ENST00000552875 ZC3H10Q96K80 434 aaKnown RBP9.94□□□□□ -0.82
PRKCH-203ENST00000552875 MAP7D2Q96T17 732 aa9.94□□□□□ -0.82
PRKCH-203ENST00000552875 TMEM175Q9BSA9 504 aa9.94□□□□□ -0.82
PRKCH-203ENST00000552875 HERC2P3Q9BVR0 1158 aa9.94□□□□□ -0.82
PRKCH-203ENST00000552875 CLMPQ9H6B4 373 aa9.94□□□□□ -0.82
PRKCH-203ENST00000552875 RXFP1Q9HBX9 757 aa9.94□□□□□ -0.82
PRKCH-203ENST00000552875 CHST12Q9NRB3 414 aa9.94□□□□□ -0.82
PRKCH-203ENST00000552875 KANSL3Q9P2N6 904 aa9.94□□□□□ -0.82
PRKCH-203ENST00000552875 KCNH3Q9ULD8 1083 aa9.94□□□□□ -0.82
PRKCH-203ENST00000552875 FREM2Q5SZK8 3169 aa9.93□□□□□ -0.82
PRKCH-203ENST00000552875 LNP1A1A4G5 178 aa9.93□□□□□ -0.82
PRKCH-203ENST00000552875 CAPN9O14815 690 aa9.93□□□□□ -0.82
PRKCH-203ENST00000552875 KHNYNO15037 678 aaKnown RBP9.93□□□□□ -0.82
PRKCH-203ENST00000552875 ATP9AO75110 1047 aa9.93□□□□□ -0.82
PRKCH-203ENST00000552875 GPR32O75388 356 aa9.93□□□□□ -0.82
PRKCH-203ENST00000552875 RHOBTB1O94844 696 aa9.93□□□□□ -0.82
PRKCH-203ENST00000552875 CAPNS1P04632 268 aa9.93□□□□□ -0.82
PRKCH-203ENST00000552875 CHRNB1P11230 501 aa9.93□□□□□ -0.82
PRKCH-203ENST00000552875 TMOD1P28289 359 aa9.93□□□□□ -0.82
PRKCH-203ENST00000552875 SIM1P81133 766 aaPredicted RBP9.93□□□□□ -0.82
PRKCH-203ENST00000552875 CREB5Q02930 508 aa9.93□□□□□ -0.82
PRKCH-203ENST00000552875 PTGDRQ13258 359 aa9.93□□□□□ -0.82
PRKCH-203ENST00000552875 ZNF484Q5JVG2 852 aa9.93□□□□□ -0.82
PRKCH-203ENST00000552875 DGKKQ5KSL6 1271 aa9.93□□□□□ -0.82
PRKCH-203ENST00000552875 PPM1LQ5SGD2 360 aa9.93□□□□□ -0.82
PRKCH-203ENST00000552875 ELSPBP1Q96BH3 223 aa9.93□□□□□ -0.82
PRKCH-203ENST00000552875 PGBD4Q96DM1 585 aa9.93□□□□□ -0.82
PRKCH-203ENST00000552875 SCLT1Q96NL6 688 aa9.93□□□□□ -0.82
PRKCH-203ENST00000552875 SEC62Q99442 399 aaKnown RBP9.93□□□□□ -0.82
PRKCH-203ENST00000552875 SDF4Q9BRK5 362 aa9.93□□□□□ -0.82
PRKCH-203ENST00000552875 TRMT61BQ9BVS5 477 aaKnown RBP9.93□□□□□ -0.82
PRKCH-203ENST00000552875 RNF41Q9H4P4 317 aaPredicted RBP9.93□□□□□ -0.82
PRKCH-203ENST00000552875 TRPV5Q9NQA5 729 aa9.93□□□□□ -0.82
PRKCH-203ENST00000552875 GDE1Q9NZC3 331 aa9.93□□□□□ -0.82
PRKCH-203ENST00000552875 SLC9A2Q9UBY0 812 aa9.93□□□□□ -0.82
PRKCH-203ENST00000552875 DNAJB4Q9UDY4 337 aa9.93□□□□□ -0.82
PRKCH-203ENST00000552875 POLIQ9UNA4 740 aa9.93□□□□□ -0.82
PRKCH-203ENST00000552875 PIAS3Q9Y6X2 628 aa9.93□□□□□ -0.82
PRKCH-203ENST00000552875 LAMA5O15230 3695 aa9.92□□□□□ -0.82
PRKCH-203ENST00000552875 GREB1Q4ZG55 1949 aa9.92□□□□□ -0.82
PRKCH-203ENST00000552875 NR1I2O75469 434 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms