RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 MRPL17Q9NRX2 175 aaKnown RBP11.66□□□□□ -0.54
SLC48A1-209ENST00000552003 HELLSQ9NRZ9 838 aa11.66□□□□□ -0.54
SLC48A1-209ENST00000552003 C2orf42Q9NWW7 574 aa11.66□□□□□ -0.54
SLC48A1-209ENST00000552003 MARCH5Q9NX47 278 aa11.66□□□□□ -0.54
SLC48A1-209ENST00000552003 CDH7Q9ULB5 785 aa11.66□□□□□ -0.54
SLC48A1-209ENST00000552003 TMEM8BA6NDV4 472 aa11.65□□□□□ -0.54
SLC48A1-209ENST00000552003 F8W810 466 aa11.65□□□□□ -0.54
SLC48A1-209ENST00000552003 PIK3CDO00329 1044 aa11.65□□□□□ -0.54
SLC48A1-209ENST00000552003 NRG2O14511 850 aaPredicted RBP11.65□□□□□ -0.54
SLC48A1-209ENST00000552003 HBP1O60381 514 aa11.65□□□□□ -0.54
SLC48A1-209ENST00000552003 GLUD1P00367 558 aa11.65□□□□□ -0.54
SLC48A1-209ENST00000552003 FSHRP23945 695 aa11.65□□□□□ -0.54
SLC48A1-209ENST00000552003 CLCN3P51790 818 aa11.65□□□□□ -0.54
SLC48A1-209ENST00000552003 AK2P54819 239 aa11.65□□□□□ -0.54
SLC48A1-209ENST00000552003 NRLP54845 237 aa11.65□□□□□ -0.54
SLC48A1-209ENST00000552003 LILRA6Q6PI73 481 aa11.65□□□□□ -0.54
SLC48A1-209ENST00000552003 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.65□□□□□ -0.54
SLC48A1-209ENST00000552003 GRASPQ7Z6J2 395 aaPredicted RBP11.65□□□□□ -0.54
SLC48A1-209ENST00000552003 IQCA1Q86XH1 822 aa11.65□□□□□ -0.54
SLC48A1-209ENST00000552003 PALB2Q86YC2 1186 aa11.65□□□□□ -0.54
SLC48A1-209ENST00000552003 CCDC60Q8IWA6 550 aaPredicted RBP11.65□□□□□ -0.54
SLC48A1-209ENST00000552003 RNF168Q8IYW5 571 aaPredicted RBP11.65□□□□□ -0.54
SLC48A1-209ENST00000552003 SMARCC2Q8TAQ2 1214 aa11.65□□□□□ -0.54
SLC48A1-209ENST00000552003 ITFG1Q8TB96 612 aa11.65□□□□□ -0.54
SLC48A1-209ENST00000552003 FGF13Q92913 245 aa11.65□□□□□ -0.54
SLC48A1-209ENST00000552003 CDHR1Q96JP9 859 aa11.65□□□□□ -0.54
SLC48A1-209ENST00000552003 NELL2Q99435 816 aa11.65□□□□□ -0.54
SLC48A1-209ENST00000552003 ARRDC1-AS1Q9H2J1 176 aa11.65□□□□□ -0.54
SLC48A1-209ENST00000552003 PIDD1Q9HB75 910 aa11.65□□□□□ -0.54
SLC48A1-209ENST00000552003 KCNH7Q9NS40 1196 aa11.65□□□□□ -0.54
SLC48A1-209ENST00000552003 INPP5FQ9Y2H2 1132 aa11.65□□□□□ -0.54
SLC48A1-209ENST00000552003 SALL3Q9BXA9 1300 aa11.64□□□□□ -0.55
SLC48A1-209ENST00000552003 K7ESF4 209 aa11.64□□□□□ -0.55
SLC48A1-209ENST00000552003 AXIN1O15169 862 aa11.64□□□□□ -0.55
SLC48A1-209ENST00000552003 TGM5O43548 720 aa11.64□□□□□ -0.55
SLC48A1-209ENST00000552003 SOD2P04179 222 aa11.64□□□□□ -0.55
SLC48A1-209ENST00000552003 CAPNS1P04632 268 aa11.64□□□□□ -0.55
SLC48A1-209ENST00000552003 EIF4BP23588 611 aaKnown RBP11.64□□□□□ -0.55
SLC48A1-209ENST00000552003 PHKA2P46019 1235 aa11.64□□□□□ -0.55
SLC48A1-209ENST00000552003 GRM4Q14833 912 aa11.64□□□□□ -0.55
SLC48A1-209ENST00000552003 MCMDC2Q4G0Z9 681 aa11.64□□□□□ -0.55
SLC48A1-209ENST00000552003 NOMO2Q5JPE7 1267 aa11.64□□□□□ -0.55
SLC48A1-209ENST00000552003 C19orf48Q6RUI8 117 aa11.64□□□□□ -0.55
SLC48A1-209ENST00000552003 ABHD15Q6UXT9 468 aa11.64□□□□□ -0.55
SLC48A1-209ENST00000552003 B3GALT6Q96L58 329 aa11.64□□□□□ -0.55
SLC48A1-209ENST00000552003 RNF41Q9H4P4 317 aaPredicted RBP11.64□□□□□ -0.55
SLC48A1-209ENST00000552003 DDX19BQ9UMR2 479 aa11.64□□□□□ -0.55
SLC48A1-209ENST00000552003 NDRG2Q9UN36 371 aaKnown RBP11.64□□□□□ -0.55
SLC48A1-209ENST00000552003 COL1A2P08123 1366 aa11.64□□□□□ -0.55
SLC48A1-209ENST00000552003 MYO18BQ8IUG5 2567 aa11.63□□□□□ -0.55
SLC48A1-209ENST00000552003 NRP1O14786 923 aa11.63□□□□□ -0.55
SLC48A1-209ENST00000552003 GAS2O43903 313 aaKnown RBP11.63□□□□□ -0.55
SLC48A1-209ENST00000552003 ADH1AP07327 375 aa11.63□□□□□ -0.55
SLC48A1-209ENST00000552003 ZNF806P0C7X5 589 aa11.63□□□□□ -0.55
SLC48A1-209ENST00000552003 DARSP14868 501 aaKnown RBP11.63□□□□□ -0.55
SLC48A1-209ENST00000552003 RBM25P49756 843 aaKnown RBP11.63□□□□□ -0.55
SLC48A1-209ENST00000552003 ZNF252P-AS1Q0IIN9 211 aa11.63□□□□□ -0.55
SLC48A1-209ENST00000552003 NMIQ13287 307 aaPredicted RBP11.63□□□□□ -0.55
SLC48A1-209ENST00000552003 UBE2SQ16763 222 aa11.63□□□□□ -0.55
SLC48A1-209ENST00000552003 CCDC178Q5BJE1 867 aa11.63□□□□□ -0.55
SLC48A1-209ENST00000552003 WDR44Q5JSH3 913 aa11.63□□□□□ -0.55
SLC48A1-209ENST00000552003 ZNF484Q5JVG2 852 aa11.63□□□□□ -0.55
SLC48A1-209ENST00000552003 TCEAL6Q6IPX3 200 aa11.63□□□□□ -0.55
SLC48A1-209ENST00000552003 ZNF852Q6ZMS4 543 aa11.63□□□□□ -0.55
SLC48A1-209ENST00000552003 CYB5R4Q7L1T6 521 aa11.63□□□□□ -0.55
SLC48A1-209ENST00000552003 LRRC71Q8N4P6 559 aa11.63□□□□□ -0.55
SLC48A1-209ENST00000552003 METTL13Q8N6R0 699 aa11.63□□□□□ -0.55
SLC48A1-209ENST00000552003 ADAM32Q8TC27 787 aa11.63□□□□□ -0.55
SLC48A1-209ENST00000552003 TNPO1Q92973 898 aaKnown RBP11.63□□□□□ -0.55
SLC48A1-209ENST00000552003 PHKBQ93100 1093 aa11.63□□□□□ -0.55
SLC48A1-209ENST00000552003 TCEAL3Q969E4 200 aa11.63□□□□□ -0.55
SLC48A1-209ENST00000552003 HERC2P3Q9BVR0 1158 aa11.63□□□□□ -0.55
SLC48A1-209ENST00000552003 ZDHHC7Q9NXF8 308 aa11.63□□□□□ -0.55
SLC48A1-209ENST00000552003 ZFP37Q9Y6Q3 630 aaPredicted RBP11.63□□□□□ -0.55
SLC48A1-209ENST00000552003 PCNX2A6NKB5 2137 aa11.63□□□□□ -0.55
SLC48A1-209ENST00000552003 HECTD1Q9ULT8 2610 aa11.63□□□□□ -0.55
SLC48A1-209ENST00000552003 ASCC3Q8N3C0 2202 aaKnown RBP11.63□□□□□ -0.55
SLC48A1-209ENST00000552003 MYH9P35579 1960 aaKnown RBP11.63□□□□□ -0.55
SLC48A1-209ENST00000552003 APC2O95996 2303 aa11.63□□□□□ -0.55
SLC48A1-209ENST00000552003 NFASCO94856 1347 aa11.62□□□□□ -0.55
SLC48A1-209ENST00000552003 WDR81Q562E7 1941 aa11.62□□□□□ -0.55
SLC48A1-209ENST00000552003 KALRNO60229 2985 aa11.62□□□□□ -0.55
SLC48A1-209ENST00000552003 NCAM2O15394 837 aa11.62□□□□□ -0.55
SLC48A1-209ENST00000552003 FOXD2O60548 495 aaPredicted RBP11.62□□□□□ -0.55
SLC48A1-209ENST00000552003 ZMYND10O75800 440 aa11.62□□□□□ -0.55
SLC48A1-209ENST00000552003 RPL17P18621 184 aaKnown RBP11.62□□□□□ -0.55
SLC48A1-209ENST00000552003 NOVA1P51513 510 aaKnown RBP11.62□□□□□ -0.55
SLC48A1-209ENST00000552003 GPC3P51654 580 aa11.62□□□□□ -0.55
SLC48A1-209ENST00000552003 PFKPQ01813 784 aa11.62□□□□□ -0.55
SLC48A1-209ENST00000552003 PLA2G2CQ5R387 149 aa11.62□□□□□ -0.55
SLC48A1-209ENST00000552003 IFIT1BQ5T764 474 aaKnown RBP11.62□□□□□ -0.55
SLC48A1-209ENST00000552003 PDZD3Q86UT5 571 aa11.62□□□□□ -0.55
SLC48A1-209ENST00000552003 HDAC7Q8WUI4 952 aa11.62□□□□□ -0.55
SLC48A1-209ENST00000552003 PHF20Q9BVI0 1012 aa11.62□□□□□ -0.55
SLC48A1-209ENST00000552003 LMAN1LQ9HAT1 526 aa11.62□□□□□ -0.55
SLC48A1-209ENST00000552003 GPSM3Q9Y4H4 160 aa11.62□□□□□ -0.55
SLC48A1-209ENST00000552003 CFAP46Q8IYW2 2715 aa11.62□□□□□ -0.55
SLC48A1-209ENST00000552003 ACACAQ13085 2346 aa11.61□□□□□ -0.55
SLC48A1-209ENST00000552003 EML5Q05BV3 1969 aa11.61□□□□□ -0.55
SLC48A1-209ENST00000552003 MAFGO15525 162 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms