RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 CNTNAP2Q9UHC6 1331 aa17.23■□□□□ 0.35
CACNB3-220ENST00000551716 C2CD2LO14523 706 aa17.23■□□□□ 0.35
CACNB3-220ENST00000551716 TEX28O15482 410 aa17.23■□□□□ 0.35
CACNB3-220ENST00000551716 CSDE1O75534 798 aaKnown RBP17.23■□□□□ 0.35
CACNB3-220ENST00000551716 CLK2P49760 499 aaKnown RBP17.23■□□□□ 0.35
CACNB3-220ENST00000551716 LONRF3Q496Y0 759 aa17.23■□□□□ 0.35
CACNB3-220ENST00000551716 ZBTB44Q8NCP5 570 aa17.23■□□□□ 0.35
CACNB3-220ENST00000551716 MAP4K1Q92918 833 aa17.23■□□□□ 0.35
CACNB3-220ENST00000551716 DDX23Q9BUQ8 820 aaKnown RBP17.23■□□□□ 0.35
CACNB3-220ENST00000551716 FAM126AQ9BYI3 521 aaPredicted RBP17.23■□□□□ 0.35
CACNB3-220ENST00000551716 NT5C3AQ9H0P0 336 aa17.23■□□□□ 0.35
CACNB3-220ENST00000551716 SMG5Q9UPR3 1016 aaKnown RBP17.23■□□□□ 0.35
CACNB3-220ENST00000551716 PCDHB2Q9Y5E7 798 aa17.23■□□□□ 0.35
CACNB3-220ENST00000551716 NUMBLQ9Y6R0 609 aa17.23■□□□□ 0.35
CACNB3-220ENST00000551716 CACNA1IQ9P0X4 2223 aa17.23■□□□□ 0.35
CACNB3-220ENST00000551716 DCDC2BA2VCK2 349 aa17.22■□□□□ 0.35
CACNB3-220ENST00000551716 NRP1O14786 923 aa17.22■□□□□ 0.35
CACNB3-220ENST00000551716 NCAM2O15394 837 aa17.22■□□□□ 0.35
CACNB3-220ENST00000551716 GAS2O43903 313 aaKnown RBP17.22■□□□□ 0.35
CACNB3-220ENST00000551716 RFPL2O75678 378 aa17.22■□□□□ 0.35
CACNB3-220ENST00000551716 PFKPQ01813 784 aa17.22■□□□□ 0.35
CACNB3-220ENST00000551716 DIEXFQ68CQ4 756 aaKnown RBP17.22■□□□□ 0.35
CACNB3-220ENST00000551716 TYW1BQ6NUM6 668 aa17.22■□□□□ 0.35
CACNB3-220ENST00000551716 GPR65Q8IYL9 337 aa17.22■□□□□ 0.35
CACNB3-220ENST00000551716 CRYGNQ8WXF5 182 aa17.22■□□□□ 0.35
CACNB3-220ENST00000551716 ZNF707Q96C28 371 aaPredicted RBP17.22■□□□□ 0.35
CACNB3-220ENST00000551716 HERC2P3Q9BVR0 1158 aa17.22■□□□□ 0.35
CACNB3-220ENST00000551716 PRKD2Q9BZL6 878 aa17.22■□□□□ 0.35
CACNB3-220ENST00000551716 UBN1Q9NPG3 1134 aa17.22■□□□□ 0.35
CACNB3-220ENST00000551716 DISC1Q9NRI5 854 aa17.22■□□□□ 0.35
CACNB3-220ENST00000551716 BARHL2Q9NY43 387 aa17.22■□□□□ 0.35
CACNB3-220ENST00000551716 GMEB2Q9UKD1 530 aa17.22■□□□□ 0.35
CACNB3-220ENST00000551716 USP18Q9UMW8 372 aa17.22■□□□□ 0.35
CACNB3-220ENST00000551716 FAM170BA6NMN3 283 aa17.21■□□□□ 0.35
CACNB3-220ENST00000551716 LILRB5O75023 590 aa17.21■□□□□ 0.35
CACNB3-220ENST00000551716 NR1I2O75469 434 aa17.21■□□□□ 0.35
CACNB3-220ENST00000551716 DDHD2O94830 711 aa17.21■□□□□ 0.35
CACNB3-220ENST00000551716 GLUD2P49448 558 aa17.21■□□□□ 0.35
CACNB3-220ENST00000551716 GPC5P78333 572 aa17.21■□□□□ 0.35
CACNB3-220ENST00000551716 PRKCEQ02156 737 aa17.21■□□□□ 0.35
CACNB3-220ENST00000551716 SNW1Q13573 536 aaKnown RBP17.21■□□□□ 0.35
CACNB3-220ENST00000551716 SLC44A4Q53GD3 710 aa17.21■□□□□ 0.35
CACNB3-220ENST00000551716 CATSPER4Q7RTX7 472 aa17.21■□□□□ 0.35
CACNB3-220ENST00000551716 MRPL10Q7Z7H8 261 aaKnown RBP17.21■□□□□ 0.35
CACNB3-220ENST00000551716 RSAD1Q9HA92 442 aa17.21■□□□□ 0.35
CACNB3-220ENST00000551716 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.21■□□□□ 0.35
CACNB3-220ENST00000551716 V9GY48 417 aaPredicted RBP17.21■□□□□ 0.35
CACNB3-220ENST00000551716 FANCMQ8IYD8 2048 aa17.21■□□□□ 0.35
CACNB3-220ENST00000551716 ZFHX4Q86UP3 3567 aa17.2■□□□□ 0.34
CACNB3-220ENST00000551716 CHD6Q8TD26 2715 aa17.2■□□□□ 0.34
CACNB3-220ENST00000551716 A0A087WZ62 844 aa17.2■□□□□ 0.34
CACNB3-220ENST00000551716 MEIS3P2A8K0S8 358 aa17.2■□□□□ 0.34
CACNB3-220ENST00000551716 ZNF862O60290 1169 aa17.2■□□□□ 0.34
CACNB3-220ENST00000551716 CHMLP26374 656 aa17.2■□□□□ 0.34
CACNB3-220ENST00000551716 SFNP31947 248 aa17.2■□□□□ 0.34
CACNB3-220ENST00000551716 CREMQ03060 361 aa17.2■□□□□ 0.34
CACNB3-220ENST00000551716 TARBP2Q15633 366 aaKnown RBP17.2■□□□□ 0.34
CACNB3-220ENST00000551716 MLF2Q15773 248 aaPredicted RBP17.2■□□□□ 0.34
CACNB3-220ENST00000551716 ZBTB41Q5SVQ8 909 aa17.2■□□□□ 0.34
CACNB3-220ENST00000551716 JAKMIP3Q5VZ66 844 aa17.2■□□□□ 0.34
CACNB3-220ENST00000551716 MTSS1LQ765P7 747 aa17.2■□□□□ 0.34
CACNB3-220ENST00000551716 GET4Q7L5D6 327 aaPredicted RBP17.2■□□□□ 0.34
CACNB3-220ENST00000551716 SGMS1Q86VZ5 419 aa17.2■□□□□ 0.34
CACNB3-220ENST00000551716 MICU3Q86XE3 530 aa17.2■□□□□ 0.34
CACNB3-220ENST00000551716 NELL1Q92832 810 aa17.2■□□□□ 0.34
CACNB3-220ENST00000551716 FDXACB1Q9BRP7 624 aaPredicted RBP17.2■□□□□ 0.34
CACNB3-220ENST00000551716 NIFKQ9BYG3 293 aaKnown RBP17.2■□□□□ 0.34
CACNB3-220ENST00000551716 CHD8Q9HCK8 2581 aa17.2■□□□□ 0.34
CACNB3-220ENST00000551716 LRRN2O75325 713 aa17.19■□□□□ 0.34
CACNB3-220ENST00000551716 FSHRP23945 695 aa17.19■□□□□ 0.34
CACNB3-220ENST00000551716 JAK3P52333 1124 aa17.19■□□□□ 0.34
CACNB3-220ENST00000551716 DSG1Q02413 1049 aa17.19■□□□□ 0.34
CACNB3-220ENST00000551716 UBXN2BQ14CS0 331 aa17.19■□□□□ 0.34
CACNB3-220ENST00000551716 PRR16Q569H4 304 aa17.19■□□□□ 0.34
CACNB3-220ENST00000551716 AGMOQ6ZNB7 445 aa17.19■□□□□ 0.34
CACNB3-220ENST00000551716 CNNM3Q8NE01 707 aa17.19■□□□□ 0.34
CACNB3-220ENST00000551716 NETO1Q8TDF5 533 aa17.19■□□□□ 0.34
CACNB3-220ENST00000551716 JPH2Q9BR39 696 aaPredicted RBP17.19■□□□□ 0.34
CACNB3-220ENST00000551716 SUCLA2Q9P2R7 463 aaPredicted RBP17.19■□□□□ 0.34
CACNB3-220ENST00000551716 CDH7Q9ULB5 785 aa17.19■□□□□ 0.34
CACNB3-220ENST00000551716 RAB23Q9ULC3 237 aa17.19■□□□□ 0.34
CACNB3-220ENST00000551716 MAP1BP46821 2468 aaKnown RBP17.19■□□□□ 0.34
CACNB3-220ENST00000551716 IGKV6-21A0A0C4DH24 114 aa17.18■□□□□ 0.34
CACNB3-220ENST00000551716 SGSM2O43147 1006 aa17.18■□□□□ 0.34
CACNB3-220ENST00000551716 B4GALT3O60512 393 aa17.18■□□□□ 0.34
CACNB3-220ENST00000551716 SPATA31D3P0C874 917 aa17.18■□□□□ 0.34
CACNB3-220ENST00000551716 TGM1P22735 817 aa17.18■□□□□ 0.34
CACNB3-220ENST00000551716 CIITAP33076 1130 aa17.18■□□□□ 0.34
CACNB3-220ENST00000551716 NRLP54845 237 aa17.18■□□□□ 0.34
CACNB3-220ENST00000551716 XKR3Q5GH77 459 aa17.18■□□□□ 0.34
CACNB3-220ENST00000551716 SPATA31D4Q6ZUB0 917 aa17.18■□□□□ 0.34
CACNB3-220ENST00000551716 PALB2Q86YC2 1186 aa17.18■□□□□ 0.34
CACNB3-220ENST00000551716 RAB11FIP4Q86YS3 637 aa17.18■□□□□ 0.34
CACNB3-220ENST00000551716 RHPN2Q8IUC4 686 aa17.18■□□□□ 0.34
CACNB3-220ENST00000551716 CLDN23Q96B33 292 aa17.18■□□□□ 0.34
CACNB3-220ENST00000551716 RIT2Q99578 217 aa17.18■□□□□ 0.34
CACNB3-220ENST00000551716 COLEC11Q9BWP8 271 aa17.18■□□□□ 0.34
CACNB3-220ENST00000551716 FNIP2Q9P278 1114 aa17.18■□□□□ 0.34
CACNB3-220ENST00000551716 MRPS17Q9Y2R5 130 aaKnown RBP17.18■□□□□ 0.34
CACNB3-220ENST00000551716 RBM8AQ9Y5S9 174 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms