RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 TPCN1Q9ULQ1 816 aa24.25■■□□□ 1.47
SMARCC2-210ENST00000550519 SORCS3Q9UPU3 1222 aa24.25■■□□□ 1.47
SMARCC2-210ENST00000550519 GAS2O43903 313 aaKnown RBP24.24■■□□□ 1.47
SMARCC2-210ENST00000550519 DDHD2O94830 711 aa24.24■■□□□ 1.47
SMARCC2-210ENST00000550519 WEE2P0C1S8 567 aa24.24■■□□□ 1.47
SMARCC2-210ENST00000550519 AVPR2P30518 371 aa24.24■■□□□ 1.47
SMARCC2-210ENST00000550519 YWHABP31946 246 aaKnown RBP24.24■■□□□ 1.47
SMARCC2-210ENST00000550519 AFF1P51825 1210 aaKnown RBP24.24■■□□□ 1.47
SMARCC2-210ENST00000550519 SPIRE1Q08AE8 756 aa24.24■■□□□ 1.47
SMARCC2-210ENST00000550519 PTPN14Q15678 1187 aa24.24■■□□□ 1.47
SMARCC2-210ENST00000550519 UBXN11Q5T124 520 aa24.24■■□□□ 1.47
SMARCC2-210ENST00000550519 KIAA1841Q6NSI8 718 aa24.24■■□□□ 1.47
SMARCC2-210ENST00000550519 URGCPQ8TCY9 931 aa24.24■■□□□ 1.47
SMARCC2-210ENST00000550519 RSAD1Q9HA92 442 aa24.24■■□□□ 1.47
SMARCC2-210ENST00000550519 CACNA1HO95180 2353 aa24.23■■□□□ 1.47
SMARCC2-210ENST00000550519 ASAP2O43150 1006 aa24.23■■□□□ 1.47
SMARCC2-210ENST00000550519 EARS2Q5JPH6 523 aaKnown RBP24.23■■□□□ 1.47
SMARCC2-210ENST00000550519 ATAT1Q5SQI0 421 aa24.23■■□□□ 1.47
SMARCC2-210ENST00000550519 KANK3Q6NY19 840 aa24.23■■□□□ 1.47
SMARCC2-210ENST00000550519 OTUD6AQ7L8S5 288 aa24.23■■□□□ 1.47
SMARCC2-210ENST00000550519 FERMT3Q86UX7 667 aa24.23■■□□□ 1.47
SMARCC2-210ENST00000550519 POTEDQ86YR6 584 aa24.23■■□□□ 1.47
SMARCC2-210ENST00000550519 UBALD2Q8IYN6 164 aa24.23■■□□□ 1.47
SMARCC2-210ENST00000550519 TCP11Q8WWU5 503 aa24.23■■□□□ 1.47
SMARCC2-210ENST00000550519 ZSWIM4Q9H7M6 989 aa24.23■■□□□ 1.47
SMARCC2-210ENST00000550519 KANSL3Q9P2N6 904 aa24.23■■□□□ 1.47
SMARCC2-210ENST00000550519 STK39Q9UEW8 545 aa24.23■■□□□ 1.47
SMARCC2-210ENST00000550519 CNTNAP2Q9UHC6 1331 aa24.23■■□□□ 1.47
SMARCC2-210ENST00000550519 DTNBO60941 627 aa24.22■■□□□ 1.47
SMARCC2-210ENST00000550519 CTDNEP1O95476 244 aa24.22■■□□□ 1.47
SMARCC2-210ENST00000550519 MTMR3Q13615 1198 aa24.22■■□□□ 1.47
SMARCC2-210ENST00000550519 EMC2Q15006 297 aa24.22■■□□□ 1.47
SMARCC2-210ENST00000550519 NCAPH2Q6IBW4 605 aa24.22■■□□□ 1.47
SMARCC2-210ENST00000550519 PPFIBP1Q86W92 1011 aa24.22■■□□□ 1.47
SMARCC2-210ENST00000550519 ZDHHC14Q8IZN3 488 aa24.22■■□□□ 1.47
SMARCC2-210ENST00000550519 RNF149Q8NC42 400 aa24.22■■□□□ 1.47
SMARCC2-210ENST00000550519 DYDC2Q96IM9 177 aa24.22■■□□□ 1.47
SMARCC2-210ENST00000550519 TMEM175Q9BSA9 504 aa24.22■■□□□ 1.47
SMARCC2-210ENST00000550519 BMP2KQ9NSY1 1161 aaPredicted RBP24.22■■□□□ 1.47
SMARCC2-210ENST00000550519 USTQ9Y2C2 406 aa24.22■■□□□ 1.47
SMARCC2-210ENST00000550519 ZBTB39O15060 712 aa24.21■■□□□ 1.47
SMARCC2-210ENST00000550519 MARCH6O60337 910 aa24.21■■□□□ 1.47
SMARCC2-210ENST00000550519 LILRB3O75022 631 aa24.21■■□□□ 1.47
SMARCC2-210ENST00000550519 BRD1O95696 1058 aa24.21■■□□□ 1.47
SMARCC2-210ENST00000550519 PDGFBP01127 241 aaPredicted RBP24.21■■□□□ 1.47
SMARCC2-210ENST00000550519 ALDH2P05091 517 aa24.21■■□□□ 1.47
SMARCC2-210ENST00000550519 NCLP19338 710 aaKnown RBP24.21■■□□□ 1.47
SMARCC2-210ENST00000550519 CTTNQ14247 550 aaKnown RBP24.21■■□□□ 1.47
SMARCC2-210ENST00000550519 XKR9Q5GH70 373 aa24.21■■□□□ 1.47
SMARCC2-210ENST00000550519 SLFN12Q8IYM2 578 aa24.21■■□□□ 1.47
SMARCC2-210ENST00000550519 ORC3Q9UBD5 711 aaPredicted RBP24.21■■□□□ 1.47
SMARCC2-210ENST00000550519 KMT2EQ8IZD2 1858 aa24.2■■□□□ 1.46
SMARCC2-210ENST00000550519 FAM205CA6NFA0 338 aa24.2■■□□□ 1.46
SMARCC2-210ENST00000550519 SLITRK3O94933 977 aa24.2■■□□□ 1.46
SMARCC2-210ENST00000550519 CYP4A11Q02928 519 aa24.2■■□□□ 1.46
SMARCC2-210ENST00000550519 CABP7Q86V35 215 aa24.2■■□□□ 1.46
SMARCC2-210ENST00000550519 TDRD5Q8NAT2 981 aaKnown RBP24.2■■□□□ 1.46
SMARCC2-210ENST00000550519 SMG8Q8ND04 991 aaKnown RBP24.2■■□□□ 1.46
SMARCC2-210ENST00000550519 CNNM3Q8NE01 707 aa24.2■■□□□ 1.46
SMARCC2-210ENST00000550519 FEZF2Q8TBJ5 459 aa24.2■■□□□ 1.46
SMARCC2-210ENST00000550519 TNFRSF25Q93038 417 aa24.2■■□□□ 1.46
SMARCC2-210ENST00000550519 KLHL5Q96PQ7 755 aa24.2■■□□□ 1.46
SMARCC2-210ENST00000550519 MTRQ99707 1265 aa24.2■■□□□ 1.46
SMARCC2-210ENST00000550519 XPNPEP1Q9NQW7 623 aa24.2■■□□□ 1.46
SMARCC2-210ENST00000550519 DBR1Q9UK59 544 aaKnown RBP24.2■■□□□ 1.46
SMARCC2-210ENST00000550519 FAN1Q9Y2M0 1017 aa24.2■■□□□ 1.46
SMARCC2-210ENST00000550519 NRP1O14786 923 aa24.19■■□□□ 1.46
SMARCC2-210ENST00000550519 BAG4O95429 457 aaKnown RBP24.19■■□□□ 1.46
SMARCC2-210ENST00000550519 POMCP01189 267 aa24.19■■□□□ 1.46
SMARCC2-210ENST00000550519 FDPSP14324 419 aaKnown RBP24.19■■□□□ 1.46
SMARCC2-210ENST00000550519 PTENP60484 403 aa24.19■■□□□ 1.46
SMARCC2-210ENST00000550519 NR5A1Q13285 461 aa24.19■■□□□ 1.46
SMARCC2-210ENST00000550519 PCBP1Q15365 356 aaKnown RBP eCLIP24.19■■□□□ 1.46
SMARCC2-210ENST00000550519 TMC5Q6UXY8 1006 aa24.19■■□□□ 1.46
SMARCC2-210ENST00000550519 PLCD3Q8N3E9 789 aa24.19■■□□□ 1.46
SMARCC2-210ENST00000550519 WASF1Q92558 559 aa24.19■■□□□ 1.46
SMARCC2-210ENST00000550519 FAM193BQ96PV7 902 aaPredicted RBP24.19■■□□□ 1.46
SMARCC2-210ENST00000550519 EMILIN2Q9BXX0 1053 aa24.19■■□□□ 1.46
SMARCC2-210ENST00000550519 UBN1Q9NPG3 1134 aa24.19■■□□□ 1.46
SMARCC2-210ENST00000550519 LIMD1Q9UGP4 676 aa24.19■■□□□ 1.46
SMARCC2-210ENST00000550519 INPPL1O15357 1258 aa24.18■■□□□ 1.46
SMARCC2-210ENST00000550519 LYPLA2O95372 231 aa24.18■■□□□ 1.46
SMARCC2-210ENST00000550519 CNPP09543 421 aaKnown RBP24.18■■□□□ 1.46
SMARCC2-210ENST00000550519 AXLP30530 894 aa24.18■■□□□ 1.46
SMARCC2-210ENST00000550519 CLCN4P51793 760 aa24.18■■□□□ 1.46
SMARCC2-210ENST00000550519 NUBP1P53384 320 aa24.18■■□□□ 1.46
SMARCC2-210ENST00000550519 MXD4Q14582 209 aaPredicted RBP24.18■■□□□ 1.46
SMARCC2-210ENST00000550519 GPR149Q86SP6 731 aa24.18■■□□□ 1.46
SMARCC2-210ENST00000550519 IFNLR1Q8IU57 520 aaPredicted RBP24.18■■□□□ 1.46
SMARCC2-210ENST00000550519 TPH2Q8IWU9 490 aa24.18■■□□□ 1.46
SMARCC2-210ENST00000550519 HSD17B14Q9BPX1 270 aa24.18■■□□□ 1.46
SMARCC2-210ENST00000550519 SFXN1Q9H9B4 322 aa24.18■■□□□ 1.46
SMARCC2-210ENST00000550519 IPPQ9Y573 584 aa24.18■■□□□ 1.46
SMARCC2-210ENST00000550519 MYO10Q9HD67 2058 aa24.17■■□□□ 1.46
SMARCC2-210ENST00000550519 TSPAN1O60635 241 aa24.17■■□□□ 1.46
SMARCC2-210ENST00000550519 ERLIN2O94905 339 aa24.17■■□□□ 1.46
SMARCC2-210ENST00000550519 ASGR2P07307 311 aa24.17■■□□□ 1.46
SMARCC2-210ENST00000550519 ITGA4P13612 1032 aa24.17■■□□□ 1.46
SMARCC2-210ENST00000550519 KLRC2P26717 231 aa24.17■■□□□ 1.46
SMARCC2-210ENST00000550519 KRT2P35908 639 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms