RNA–Protein interactions for RNA: ENST00000550069.1

PFDN5-209, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-209ENST00000550069 SIRT5Q9NXA8 310 aa6.55□□□□□ -1.36
PFDN5-209ENST00000550069 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.55□□□□□ -1.36
PFDN5-209ENST00000550069 POLLQ9UGP5 575 aa6.55□□□□□ -1.36
PFDN5-209ENST00000550069 PGAP2Q9UHJ9 254 aa6.55□□□□□ -1.36
PFDN5-209ENST00000550069 PRDM4Q9UKN5 801 aa6.55□□□□□ -1.36
PFDN5-209ENST00000550069 PCDHA5Q9Y5H7 936 aa6.55□□□□□ -1.36
PFDN5-209ENST00000550069 TIMM13Q9Y5L4 95 aaPredicted RBP6.55□□□□□ -1.36
PFDN5-209ENST00000550069 LRRFIP2Q9Y608 721 aaKnown RBP6.55□□□□□ -1.36
PFDN5-209ENST00000550069 SCN9AQ15858 1988 aa6.55□□□□□ -1.36
PFDN5-209ENST00000550069 ADAMTSL1Q8N6G6 1762 aa6.54□□□□□ -1.36
PFDN5-209ENST00000550069 SALL1Q9NSC2 1324 aa6.54□□□□□ -1.36
PFDN5-209ENST00000550069 TRAV20A0A0B4J274 112 aa6.54□□□□□ -1.36
PFDN5-209ENST00000550069 NFIBO00712 420 aa6.54□□□□□ -1.36
PFDN5-209ENST00000550069 ECE2O60344 883 aa6.54□□□□□ -1.36
PFDN5-209ENST00000550069 SEMA7AO75326 666 aa6.54□□□□□ -1.36
PFDN5-209ENST00000550069 C6orf222P0C671 652 aaPredicted RBP6.54□□□□□ -1.36
PFDN5-209ENST00000550069 UQCRFS1P1P0C7P4 283 aa6.54□□□□□ -1.36
PFDN5-209ENST00000550069 TMEM253P0C7T8 217 aa6.54□□□□□ -1.36
PFDN5-209ENST00000550069 PI3P19957 117 aa6.54□□□□□ -1.36
PFDN5-209ENST00000550069 PTMSP20962 102 aa6.54□□□□□ -1.36
PFDN5-209ENST00000550069 FGFR2P21802 821 aa6.54□□□□□ -1.36
PFDN5-209ENST00000550069 CFPP27918 469 aa6.54□□□□□ -1.36
PFDN5-209ENST00000550069 HIBADHP31937 336 aaKnown RBP6.54□□□□□ -1.36
PFDN5-209ENST00000550069 RAP1GAPP47736 663 aa6.54□□□□□ -1.36
PFDN5-209ENST00000550069 LIMS1P48059 325 aa6.54□□□□□ -1.36
PFDN5-209ENST00000550069 RPL11P62913 178 aaKnown RBP6.54□□□□□ -1.36
PFDN5-209ENST00000550069 KCNAB2Q13303 367 aa6.54□□□□□ -1.36
PFDN5-209ENST00000550069 METTL24Q5JXM2 366 aa6.54□□□□□ -1.36
PFDN5-209ENST00000550069 EPHA10Q5JZY3 1008 aa6.54□□□□□ -1.36
PFDN5-209ENST00000550069 TAF3Q5VWG9 929 aa6.54□□□□□ -1.36
PFDN5-209ENST00000550069 SPTY2D1Q68D10 685 aaPredicted RBP6.54□□□□□ -1.36
PFDN5-209ENST00000550069 ZC3H14Q6PJT7 736 aaKnown RBP6.54□□□□□ -1.36
PFDN5-209ENST00000550069 CEP68Q76N32 757 aa6.54□□□□□ -1.36
PFDN5-209ENST00000550069 MTERF4Q7Z6M4 381 aaKnown RBP6.54□□□□□ -1.36
PFDN5-209ENST00000550069 TMEFF1Q8IYR6 380 aa6.54□□□□□ -1.36
PFDN5-209ENST00000550069 Q8N1Y9 231 aa6.54□□□□□ -1.36
PFDN5-209ENST00000550069 LILRB2Q8N423 598 aa6.54□□□□□ -1.36
PFDN5-209ENST00000550069 TDRD7Q8NHU6 1098 aaKnown RBP6.54□□□□□ -1.36
PFDN5-209ENST00000550069 USP33Q8TEY7 942 aa6.54□□□□□ -1.36
PFDN5-209ENST00000550069 MZB1Q8WU39 189 aa6.54□□□□□ -1.36
PFDN5-209ENST00000550069 CCDC140Q96MF4 163 aa6.54□□□□□ -1.36
PFDN5-209ENST00000550069 MEIS3Q99687 375 aa6.54□□□□□ -1.36
PFDN5-209ENST00000550069 LNPKQ9C0E8 428 aa6.54□□□□□ -1.36
PFDN5-209ENST00000550069 OSBPL2Q9H1P3 480 aa6.54□□□□□ -1.36
PFDN5-209ENST00000550069 PIF1Q9H611 641 aa6.54□□□□□ -1.36
PFDN5-209ENST00000550069 CD209Q9NNX6 404 aa6.54□□□□□ -1.36
PFDN5-209ENST00000550069 GPRC5DQ9NZD1 345 aa6.54□□□□□ -1.36
PFDN5-209ENST00000550069 DENND2AQ9ULE3 1009 aa6.54□□□□□ -1.36
PFDN5-209ENST00000550069 TRAF6Q9Y4K3 522 aa6.54□□□□□ -1.36
PFDN5-209ENST00000550069 PPP2R3BQ9Y5P8 575 aa6.54□□□□□ -1.36
PFDN5-209ENST00000550069 IRS2Q9Y4H2 1338 aa6.53□□□□□ -1.36
PFDN5-209ENST00000550069 POLR2AP24928 1970 aaKnown RBP6.53□□□□□ -1.36
PFDN5-209ENST00000550069 ZNF646O15015 1829 aaPredicted RBP6.53□□□□□ -1.36
PFDN5-209ENST00000550069 SGSM2O43147 1006 aa6.53□□□□□ -1.36
PFDN5-209ENST00000550069 ATF2P15336 505 aa6.53□□□□□ -1.36
PFDN5-209ENST00000550069 RRP1P56182 461 aaKnown RBP6.53□□□□□ -1.36
PFDN5-209ENST00000550069 LINC00310P59036 64 aa6.53□□□□□ -1.36
PFDN5-209ENST00000550069 ZNF280AP59817 542 aaPredicted RBP6.53□□□□□ -1.36
PFDN5-209ENST00000550069 FKBP1BP68106 108 aa6.53□□□□□ -1.36
PFDN5-209ENST00000550069 CXCL9Q07325 125 aa6.53□□□□□ -1.36
PFDN5-209ENST00000550069 KCNA10Q16322 511 aa6.53□□□□□ -1.36
PFDN5-209ENST00000550069 TTLL5Q6EMB2 1281 aa6.53□□□□□ -1.36
PFDN5-209ENST00000550069 SMAP1Q8IYB5 467 aaPredicted RBP6.53□□□□□ -1.36
PFDN5-209ENST00000550069 LRRC47Q8N1G4 583 aaKnown RBP6.53□□□□□ -1.36
PFDN5-209ENST00000550069 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.53□□□□□ -1.36
PFDN5-209ENST00000550069 HOOK2Q96ED9 719 aa6.53□□□□□ -1.36
PFDN5-209ENST00000550069 KIF1BPQ96EK5 621 aa6.53□□□□□ -1.36
PFDN5-209ENST00000550069 TAF1DQ9H5J8 278 aaPredicted RBP6.53□□□□□ -1.36
PFDN5-209ENST00000550069 TCAF2A6NFQ2 919 aa6.52□□□□□ -1.37
PFDN5-209ENST00000550069 N4BP3O15049 544 aa6.52□□□□□ -1.37
PFDN5-209ENST00000550069 MYO1BO43795 1136 aa6.52□□□□□ -1.37
PFDN5-209ENST00000550069 IGFBP6P24592 240 aaPredicted RBP6.52□□□□□ -1.37
PFDN5-209ENST00000550069 PMLP29590 882 aa6.52□□□□□ -1.37
PFDN5-209ENST00000550069 EPHX2P34913 555 aa6.52□□□□□ -1.37
PFDN5-209ENST00000550069 TNFAIP1Q13829 316 aa6.52□□□□□ -1.37
PFDN5-209ENST00000550069 NR1I3Q14994 352 aa6.52□□□□□ -1.37
PFDN5-209ENST00000550069 PKN1Q16512 942 aa6.52□□□□□ -1.37
PFDN5-209ENST00000550069 ATP2B3Q16720 1220 aa6.52□□□□□ -1.37
PFDN5-209ENST00000550069 CCDC158Q5M9N0 1113 aa6.52□□□□□ -1.37
PFDN5-209ENST00000550069 L1TD1Q5T7N2 865 aaKnown RBP6.52□□□□□ -1.37
PFDN5-209ENST00000550069 UTP14CQ5TAP6 766 aaKnown RBP6.52□□□□□ -1.37
PFDN5-209ENST00000550069 FKBP1CQ5VVH2 108 aa6.52□□□□□ -1.37
PFDN5-209ENST00000550069 CEP85Q6P2H3 762 aa6.52□□□□□ -1.37
PFDN5-209ENST00000550069 ATG9AQ7Z3C6 839 aa6.52□□□□□ -1.37
PFDN5-209ENST00000550069 CLASRPQ8N2M8 674 aaKnown RBP6.52□□□□□ -1.37
PFDN5-209ENST00000550069 BHLHE22Q8NFJ8 381 aaPredicted RBP6.52□□□□□ -1.37
PFDN5-209ENST00000550069 ZNF669Q96BR6 464 aaPredicted RBP6.52□□□□□ -1.37
PFDN5-209ENST00000550069 GCC1Q96CN9 775 aa6.52□□□□□ -1.37
PFDN5-209ENST00000550069 FAM84BQ96KN1 310 aaPredicted RBP6.52□□□□□ -1.37
PFDN5-209ENST00000550069 DRC1Q96MC2 740 aa6.52□□□□□ -1.37
PFDN5-209ENST00000550069 PPP1R16BQ96T49 567 aa6.52□□□□□ -1.37
PFDN5-209ENST00000550069 JAM3Q9BX67 310 aa6.52□□□□□ -1.37
PFDN5-209ENST00000550069 CLDND1Q9NY35 253 aa6.52□□□□□ -1.37
PFDN5-209ENST00000550069 DDNO94850 711 aaPredicted RBP6.51□□□□□ -1.37
PFDN5-209ENST00000550069 PTMAP06454 111 aaKnown RBP6.51□□□□□ -1.37
PFDN5-209ENST00000550069 ASGR2P07307 311 aa6.51□□□□□ -1.37
PFDN5-209ENST00000550069 PRELPP51888 382 aa6.51□□□□□ -1.37
PFDN5-209ENST00000550069 C1QTNF8P60827 252 aa6.51□□□□□ -1.37
PFDN5-209ENST00000550069 HDAC1Q13547 482 aaPredicted RBP6.51□□□□□ -1.37
PFDN5-209ENST00000550069 TTF1Q15361 905 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms