RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 PTCRAQ6ISU1 281 aaPredicted RBP11.61□□□□□ -0.55
CCDC38-207ENST00000549752 GLB1LQ6UWU2 654 aa11.61□□□□□ -0.55
CCDC38-207ENST00000549752 FERMT3Q86UX7 667 aa11.61□□□□□ -0.55
CCDC38-207ENST00000549752 CNNM3Q8NE01 707 aa11.61□□□□□ -0.55
CCDC38-207ENST00000549752 TMEM143Q96AN5 459 aa11.61□□□□□ -0.55
CCDC38-207ENST00000549752 CCDC51Q96ER9 411 aa11.61□□□□□ -0.55
CCDC38-207ENST00000549752 CASD1Q96PB1 797 aa11.61□□□□□ -0.55
CCDC38-207ENST00000549752 NACC1Q96RE7 527 aa11.61□□□□□ -0.55
CCDC38-207ENST00000549752 CDCA3Q99618 268 aaPredicted RBP11.61□□□□□ -0.55
CCDC38-207ENST00000549752 IFT122Q9HBG6 1241 aa11.61□□□□□ -0.55
CCDC38-207ENST00000549752 AGPAT5Q9NUQ2 364 aa11.61□□□□□ -0.55
CCDC38-207ENST00000549752 FAM105AQ9NUU6 356 aa11.61□□□□□ -0.55
CCDC38-207ENST00000549752 WRAP73Q9P2S5 460 aaPredicted RBP11.61□□□□□ -0.55
CCDC38-207ENST00000549752 STK39Q9UEW8 545 aa11.61□□□□□ -0.55
CCDC38-207ENST00000549752 C5orf42Q9H799 3197 aa11.61□□□□□ -0.55
CCDC38-207ENST00000549752 CNTNAP2Q9UHC6 1331 aa11.6□□□□□ -0.55
CCDC38-207ENST00000549752 RBAK-RBAKDNI3L0D1 243 aa11.6□□□□□ -0.55
CCDC38-207ENST00000549752 LAD1O00515 517 aa11.6□□□□□ -0.55
CCDC38-207ENST00000549752 CSDE1O75534 798 aaKnown RBP11.6□□□□□ -0.55
CCDC38-207ENST00000549752 FGFR4P22455 802 aa11.6□□□□□ -0.55
CCDC38-207ENST00000549752 RARRES1P49788 294 aa11.6□□□□□ -0.55
CCDC38-207ENST00000549752 PLCB3Q01970 1234 aa11.6□□□□□ -0.55
CCDC38-207ENST00000549752 HYAL1Q12794 435 aa11.6□□□□□ -0.55
CCDC38-207ENST00000549752 CTC1Q2NKJ3 1217 aa11.6□□□□□ -0.55
CCDC38-207ENST00000549752 KCNT2Q6UVM3 1135 aa11.6□□□□□ -0.55
CCDC38-207ENST00000549752 ZNF598Q86UK7 904 aaKnown RBP11.6□□□□□ -0.55
CCDC38-207ENST00000549752 KSR1Q8IVT5 923 aa11.6□□□□□ -0.55
CCDC38-207ENST00000549752 HACE1Q8IYU2 909 aa11.6□□□□□ -0.55
CCDC38-207ENST00000549752 RNF149Q8NC42 400 aa11.6□□□□□ -0.55
CCDC38-207ENST00000549752 MCPH1Q8NEM0 835 aa11.6□□□□□ -0.55
CCDC38-207ENST00000549752 URGCPQ8TCY9 931 aa11.6□□□□□ -0.55
CCDC38-207ENST00000549752 HELQQ8TDG4 1101 aa11.6□□□□□ -0.55
CCDC38-207ENST00000549752 MRPS27Q92552 414 aaKnown RBP11.6□□□□□ -0.55
CCDC38-207ENST00000549752 POP1Q99575 1024 aaKnown RBP11.6□□□□□ -0.55
CCDC38-207ENST00000549752 POLR3CQ9BUI4 534 aaPredicted RBP11.6□□□□□ -0.55
CCDC38-207ENST00000549752 CWH43Q9H720 699 aa11.6□□□□□ -0.55
CCDC38-207ENST00000549752 TLE6Q9H808 572 aa11.6□□□□□ -0.55
CCDC38-207ENST00000549752 NGRNQ9NPE2 291 aaKnown RBP11.6□□□□□ -0.55
CCDC38-207ENST00000549752 UBN1Q9NPG3 1134 aa11.6□□□□□ -0.55
CCDC38-207ENST00000549752 SPG21Q9NZD8 308 aa11.6□□□□□ -0.55
CCDC38-207ENST00000549752 KANSL3Q9P2N6 904 aa11.6□□□□□ -0.55
CCDC38-207ENST00000549752 PRKAG3Q9UGI9 489 aa11.6□□□□□ -0.55
CCDC38-207ENST00000549752 POTEMA6NI47 508 aa11.59□□□□□ -0.55
CCDC38-207ENST00000549752 H3BQ06 376 aaPredicted RBP11.59□□□□□ -0.55
CCDC38-207ENST00000549752 GABBR2O75899 941 aa11.59□□□□□ -0.55
CCDC38-207ENST00000549752 U2AF2P26368 475 aaKnown RBP eCLIP11.59□□□□□ -0.55
CCDC38-207ENST00000549752 RPA1P27694 616 aa11.59□□□□□ -0.55
CCDC38-207ENST00000549752 TECP42680 631 aa11.59□□□□□ -0.55
CCDC38-207ENST00000549752 NDUFV1P49821 464 aa11.59□□□□□ -0.55
CCDC38-207ENST00000549752 RNASELQ05823 741 aaKnown RBP11.59□□□□□ -0.55
CCDC38-207ENST00000549752 CAMK1Q14012 370 aa11.59□□□□□ -0.55
CCDC38-207ENST00000549752 ZNF174Q15697 407 aa11.59□□□□□ -0.55
CCDC38-207ENST00000549752 NOTUMQ6P988 496 aa11.59□□□□□ -0.55
CCDC38-207ENST00000549752 EFHBQ8N7U6 833 aa11.59□□□□□ -0.55
CCDC38-207ENST00000549752 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.59□□□□□ -0.55
CCDC38-207ENST00000549752 TMEM169Q96HH4 297 aa11.59□□□□□ -0.55
CCDC38-207ENST00000549752 C1QTNF1Q9BXJ1 281 aa11.59□□□□□ -0.55
CCDC38-207ENST00000549752 NFKBIZQ9BYH8 718 aa11.59□□□□□ -0.55
CCDC38-207ENST00000549752 TMEM60Q9H2L4 133 aa11.59□□□□□ -0.55
CCDC38-207ENST00000549752 IGFLR1Q9H665 355 aa11.59□□□□□ -0.55
CCDC38-207ENST00000549752 DBR1Q9UK59 544 aaKnown RBP11.59□□□□□ -0.55
CCDC38-207ENST00000549752 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.59□□□□□ -0.55
CCDC38-207ENST00000549752 INO80B-WBP1J3KQ70 363 aa11.58□□□□□ -0.56
CCDC38-207ENST00000549752 MAP3K7O43318 606 aa11.58□□□□□ -0.56
CCDC38-207ENST00000549752 CSPG5O95196 566 aa11.58□□□□□ -0.56
CCDC38-207ENST00000549752 ATF7P17544 494 aaPredicted RBP11.58□□□□□ -0.56
CCDC38-207ENST00000549752 DNAJB1P25685 340 aa11.58□□□□□ -0.56
CCDC38-207ENST00000549752 CLCN1P35523 988 aa11.58□□□□□ -0.56
CCDC38-207ENST00000549752 PTENP60484 403 aa11.58□□□□□ -0.56
CCDC38-207ENST00000549752 ADAM15Q13444 863 aa11.58□□□□□ -0.56
CCDC38-207ENST00000549752 PDIA5Q14554 519 aa11.58□□□□□ -0.56
CCDC38-207ENST00000549752 NOMO2Q5JPE7 1267 aa11.58□□□□□ -0.56
CCDC38-207ENST00000549752 CLLU1OSQ5K130 101 aa11.58□□□□□ -0.56
CCDC38-207ENST00000549752 CATSPER3Q86XQ3 398 aa11.58□□□□□ -0.56
CCDC38-207ENST00000549752 ZBTB8OSQ8IWT0 167 aa11.58□□□□□ -0.56
CCDC38-207ENST00000549752 FAM178BQ8IXR5 827 aa11.58□□□□□ -0.56
CCDC38-207ENST00000549752 FAM193BQ96PV7 902 aaPredicted RBP11.58□□□□□ -0.56
CCDC38-207ENST00000549752 TRIM6Q9C030 488 aaPredicted RBP11.58□□□□□ -0.56
CCDC38-207ENST00000549752 ENTPD7Q9NQZ7 604 aa11.58□□□□□ -0.56
CCDC38-207ENST00000549752 RNF19AQ9NV58 838 aa11.58□□□□□ -0.56
CCDC38-207ENST00000549752 CD207Q9UJ71 328 aa11.58□□□□□ -0.56
CCDC38-207ENST00000549752 PCDHB2Q9Y5E7 798 aa11.58□□□□□ -0.56
CCDC38-207ENST00000549752 ARHGEF35A5YM69 484 aa11.57□□□□□ -0.56
CCDC38-207ENST00000549752 H3BQV1 296 aa11.57□□□□□ -0.56
CCDC38-207ENST00000549752 WNT7AO00755 349 aa11.57□□□□□ -0.56
CCDC38-207ENST00000549752 ZBTB39O15060 712 aa11.57□□□□□ -0.56
CCDC38-207ENST00000549752 USO1O60763 962 aaKnown RBP11.57□□□□□ -0.56
CCDC38-207ENST00000549752 FECHP22830 423 aa11.57□□□□□ -0.56
CCDC38-207ENST00000549752 SSTR3P32745 418 aaPredicted RBP11.57□□□□□ -0.56
CCDC38-207ENST00000549752 ARL2P36404 184 aa11.57□□□□□ -0.56
CCDC38-207ENST00000549752 PRPHP41219 470 aa11.57□□□□□ -0.56
CCDC38-207ENST00000549752 NRIP1P48552 1158 aa11.57□□□□□ -0.56
CCDC38-207ENST00000549752 BCAR1P56945 870 aa11.57□□□□□ -0.56
CCDC38-207ENST00000549752 SMAD4Q13485 552 aaKnown RBP11.57□□□□□ -0.56
CCDC38-207ENST00000549752 GIT2Q14161 759 aa11.57□□□□□ -0.56
CCDC38-207ENST00000549752 SMC1AQ14683 1233 aaKnown RBP11.57□□□□□ -0.56
CCDC38-207ENST00000549752 PPP2R5AQ15172 486 aa11.57□□□□□ -0.56
CCDC38-207ENST00000549752 RILPL1Q5EBL4 403 aa11.57□□□□□ -0.56
CCDC38-207ENST00000549752 MCTP1Q6DN14 999 aa11.57□□□□□ -0.56
CCDC38-207ENST00000549752 LRRC55Q6ZSA7 311 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms