RNA–Protein interactions for RNA: ENST00000549275.5

TROAP-209, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene TROAP, Length 348 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-209ENST00000549275 IL31RAQ8NI17 732 aa12.08□□□□□ -0.48
TROAP-209ENST00000549275 ELSPBP1Q96BH3 223 aa12.08□□□□□ -0.48
TROAP-209ENST00000549275 NRDE2Q9H7Z3 1164 aa12.08□□□□□ -0.48
TROAP-209ENST00000549275 PIAS3Q9Y6X2 628 aa12.08□□□□□ -0.48
TROAP-209ENST00000549275 SPAG17Q6Q759 2223 aa12.08□□□□□ -0.48
TROAP-209ENST00000549275 PCNX2A6NKB5 2137 aa12.08□□□□□ -0.48
TROAP-209ENST00000549275 CHGBP05060 677 aa12.07□□□□□ -0.48
TROAP-209ENST00000549275 GP1BBP13224 206 aa12.07□□□□□ -0.48
TROAP-209ENST00000549275 SP4Q02446 784 aa12.07□□□□□ -0.48
TROAP-209ENST00000549275 SEMA3FQ13275 785 aa12.07□□□□□ -0.48
TROAP-209ENST00000549275 KARSQ15046 597 aaKnown RBP12.07□□□□□ -0.48
TROAP-209ENST00000549275 NPAS3Q8IXF0 933 aa12.07□□□□□ -0.48
TROAP-209ENST00000549275 PIP4K2CQ8TBX8 421 aa12.07□□□□□ -0.48
TROAP-209ENST00000549275 WBP1Q96G27 269 aa12.07□□□□□ -0.48
TROAP-209ENST00000549275 TMEM47Q9BQJ4 181 aa12.07□□□□□ -0.48
TROAP-209ENST00000549275 NACAP1Q9BZK3 213 aa12.07□□□□□ -0.48
TROAP-209ENST00000549275 CDHR5Q9HBB8 845 aa12.07□□□□□ -0.48
TROAP-209ENST00000549275 GDE1Q9NZC3 331 aa12.07□□□□□ -0.48
TROAP-209ENST00000549275 TELO2Q9Y4R8 837 aa12.07□□□□□ -0.48
TROAP-209ENST00000549275 CCDC194A0A1B0GVG4 234 aa12.06□□□□□ -0.48
TROAP-209ENST00000549275 TGM5O43548 720 aa12.06□□□□□ -0.48
TROAP-209ENST00000549275 BCAR3O75815 825 aa12.06□□□□□ -0.48
TROAP-209ENST00000549275 APPP05067 770 aa12.06□□□□□ -0.48
TROAP-209ENST00000549275 MYBP10242 640 aa12.06□□□□□ -0.48
TROAP-209ENST00000549275 SLC11A1P49279 550 aa12.06□□□□□ -0.48
TROAP-209ENST00000549275 PPARAQ07869 468 aa12.06□□□□□ -0.48
TROAP-209ENST00000549275 PLCB4Q15147 1175 aa12.06□□□□□ -0.48
TROAP-209ENST00000549275 LILRA6Q6PI73 481 aa12.06□□□□□ -0.48
TROAP-209ENST00000549275 MTHFD1LQ6UB35 978 aa12.06□□□□□ -0.48
TROAP-209ENST00000549275 AGMOQ6ZNB7 445 aa12.06□□□□□ -0.48
TROAP-209ENST00000549275 GPR65Q8IYL9 337 aa12.06□□□□□ -0.48
TROAP-209ENST00000549275 ARHGAP45Q92619 1136 aa12.06□□□□□ -0.48
TROAP-209ENST00000549275 HERC2P3Q9BVR0 1158 aa12.06□□□□□ -0.48
TROAP-209ENST00000549275 TRMT61BQ9BVS5 477 aaKnown RBP12.06□□□□□ -0.48
TROAP-209ENST00000549275 PLA2G2FQ9BZM2 168 aa12.06□□□□□ -0.48
TROAP-209ENST00000549275 EVLQ9UI08 416 aaPredicted RBP12.06□□□□□ -0.48
TROAP-209ENST00000549275 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.06□□□□□ -0.48
TROAP-209ENST00000549275 PATL2C9JE40 543 aaKnown RBP12.05□□□□□ -0.48
TROAP-209ENST00000549275 MEFVO15553 781 aaPredicted RBP12.05□□□□□ -0.48
TROAP-209ENST00000549275 POU2F2P09086 479 aa12.05□□□□□ -0.48
TROAP-209ENST00000549275 SPATA31D3P0C874 917 aa12.05□□□□□ -0.48
TROAP-209ENST00000549275 IRX4P78413 519 aa12.05□□□□□ -0.48
TROAP-209ENST00000549275 Q6ZS52 159 aa12.05□□□□□ -0.48
TROAP-209ENST00000549275 SPATA31D4Q6ZUB0 917 aa12.05□□□□□ -0.48
TROAP-209ENST00000549275 C11orf74Q86VG3 221 aa12.05□□□□□ -0.48
TROAP-209ENST00000549275 MAP4K3Q8IVH8 894 aa12.05□□□□□ -0.48
TROAP-209ENST00000549275 IFNL3Q8IZI9 196 aa12.05□□□□□ -0.48
TROAP-209ENST00000549275 ITFG1Q8TB96 612 aa12.05□□□□□ -0.48
TROAP-209ENST00000549275 TMEM175Q9BSA9 504 aa12.05□□□□□ -0.48
TROAP-209ENST00000549275 ZNF334Q9HCZ1 680 aaPredicted RBP12.05□□□□□ -0.48
TROAP-209ENST00000549275 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.05□□□□□ -0.48
TROAP-209ENST00000549275 TBC1D13Q9NVG8 400 aa12.05□□□□□ -0.48
TROAP-209ENST00000549275 PCDHB15Q9Y5E8 787 aa12.05□□□□□ -0.48
TROAP-209ENST00000549275 COL6A6A6NMZ7 2263 aa12.05□□□□□ -0.48
TROAP-209ENST00000549275 CACNA1EQ15878 2313 aa12.05□□□□□ -0.48
TROAP-209ENST00000549275 COL12A1Q99715 3063 aa12.05□□□□□ -0.48
TROAP-209ENST00000549275 UBR5O95071 2799 aaPredicted RBP12.04□□□□□ -0.48
TROAP-209ENST00000549275 GSTTP1A0A1W2PQM5 241 aa12.04□□□□□ -0.48
TROAP-209ENST00000549275 ERVH48-1M5A8F1 160 aa12.04□□□□□ -0.48
TROAP-209ENST00000549275 OPLAHO14841 1288 aa12.04□□□□□ -0.48
TROAP-209ENST00000549275 XYLBO75191 536 aa12.04□□□□□ -0.48
TROAP-209ENST00000549275 ALDH2P05091 517 aa12.04□□□□□ -0.48
TROAP-209ENST00000549275 CCNE1P24864 410 aa12.04□□□□□ -0.48
TROAP-209ENST00000549275 HOXA9P31269 272 aa12.04□□□□□ -0.48
TROAP-209ENST00000549275 GLUD2P49448 558 aa12.04□□□□□ -0.48
TROAP-209ENST00000549275 MRPS9P82933 396 aaKnown RBP12.04□□□□□ -0.48
TROAP-209ENST00000549275 RNASELQ05823 741 aaKnown RBP12.04□□□□□ -0.48
TROAP-209ENST00000549275 SERINC3Q13530 473 aa12.04□□□□□ -0.48
TROAP-209ENST00000549275 GLB1LQ6UWU2 654 aa12.04□□□□□ -0.48
TROAP-209ENST00000549275 GPR155Q7Z3F1 870 aa12.04□□□□□ -0.48
TROAP-209ENST00000549275 KIAA0319LQ8IZA0 1049 aa12.04□□□□□ -0.48
TROAP-209ENST00000549275 CAMKK1Q8N5S9 505 aa12.04□□□□□ -0.48
TROAP-209ENST00000549275 FCRL3Q96P31 734 aaPredicted RBP12.04□□□□□ -0.48
TROAP-209ENST00000549275 OSMRQ99650 979 aa12.04□□□□□ -0.48
TROAP-209ENST00000549275 C2orf42Q9NWW7 574 aa12.04□□□□□ -0.48
TROAP-209ENST00000549275 DACT1Q9NYF0 836 aa12.04□□□□□ -0.48
TROAP-209ENST00000549275 NXF1Q9UBU9 619 aaKnown RBP12.04□□□□□ -0.48
TROAP-209ENST00000549275 NOTCH2Q04721 2471 aa12.04□□□□□ -0.48
TROAP-209ENST00000549275 PYCARD-AS1I3L0S3 204 aa12.03□□□□□ -0.48
TROAP-209ENST00000549275 RANBP6O60518 1105 aaKnown RBP12.03□□□□□ -0.48
TROAP-209ENST00000549275 NTHL1P78549 312 aa12.03□□□□□ -0.48
TROAP-209ENST00000549275 DSG1Q02413 1049 aa12.03□□□□□ -0.48
TROAP-209ENST00000549275 QRICH1Q2TAL8 776 aa12.03□□□□□ -0.48
TROAP-209ENST00000549275 NOMO2Q5JPE7 1267 aa12.03□□□□□ -0.48
TROAP-209ENST00000549275 PCSK4Q6UW60 755 aa12.03□□□□□ -0.48
TROAP-209ENST00000549275 PALB2Q86YC2 1186 aa12.03□□□□□ -0.48
TROAP-209ENST00000549275 HDDC3Q8N4P3 179 aa12.03□□□□□ -0.48
TROAP-209ENST00000549275 TTC14Q96N46 770 aa12.03□□□□□ -0.48
TROAP-209ENST00000549275 MBOAT7Q96N66 472 aa12.03□□□□□ -0.48
TROAP-209ENST00000549275 AZI2Q9H6S1 392 aa12.03□□□□□ -0.48
TROAP-209ENST00000549275 RBM12Q9NTZ6 932 aaKnown RBP12.03□□□□□ -0.48
TROAP-209ENST00000549275 FNIP2Q9P278 1114 aa12.03□□□□□ -0.48
TROAP-209ENST00000549275 ANKMY1Q9P2S6 941 aa12.03□□□□□ -0.48
TROAP-209ENST00000549275 ASCC3Q8N3C0 2202 aaKnown RBP12.03□□□□□ -0.48
TROAP-209ENST00000549275 GPAA1O43292 621 aa12.02□□□□□ -0.49
TROAP-209ENST00000549275 ATP5JP18859 108 aa12.02□□□□□ -0.49
TROAP-209ENST00000549275 KLRC1P26715 233 aa12.02□□□□□ -0.49
TROAP-209ENST00000549275 FAM193AP78312 1265 aa12.02□□□□□ -0.49
TROAP-209ENST00000549275 CREMQ03060 361 aa12.02□□□□□ -0.49
TROAP-209ENST00000549275 CYP4F3Q08477 520 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms