RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 TBC1D17Q9HA65 648 aa15.22■□□□□ 0.03
CDX2-202ENST00000548877 MAN1C1Q9NR34 630 aa15.22■□□□□ 0.03
CDX2-202ENST00000548877 SLC2A4RGQ9NR83 387 aa15.22■□□□□ 0.03
CDX2-202ENST00000548877 PIN4Q9Y237 131 aaKnown RBP15.22■□□□□ 0.03
CDX2-202ENST00000548877 INPP5FQ9Y2H2 1132 aa15.22■□□□□ 0.03
CDX2-202ENST00000548877 PCDHB2Q9Y5E7 798 aa15.22■□□□□ 0.03
CDX2-202ENST00000548877 R4GN57 208 aa15.22■□□□□ 0.03
CDX2-202ENST00000548877 CCDC195A0A1B0GUA6 201 aa15.21■□□□□ 0.03
CDX2-202ENST00000548877 SPDYE4A6NLX3 237 aa15.21■□□□□ 0.03
CDX2-202ENST00000548877 GOLGA8AA7E2F4 631 aa15.21■□□□□ 0.03
CDX2-202ENST00000548877 GOLGA8BA8MQT2 603 aa15.21■□□□□ 0.03
CDX2-202ENST00000548877 ANHXE9PGG2 379 aa15.21■□□□□ 0.03
CDX2-202ENST00000548877 NRP1O14786 923 aa15.21■□□□□ 0.03
CDX2-202ENST00000548877 INPPL1O15357 1258 aa15.21■□□□□ 0.03
CDX2-202ENST00000548877 MAFO75444 373 aaPredicted RBP15.21■□□□□ 0.03
CDX2-202ENST00000548877 ADH1AP07327 375 aa15.21■□□□□ 0.03
CDX2-202ENST00000548877 KIAA0319Q5VV43 1072 aa15.21■□□□□ 0.03
CDX2-202ENST00000548877 C1orf210Q8IVY1 113 aa15.21■□□□□ 0.03
CDX2-202ENST00000548877 GPR65Q8IYL9 337 aa15.21■□□□□ 0.03
CDX2-202ENST00000548877 SUMF1Q8NBK3 374 aa15.21■□□□□ 0.03
CDX2-202ENST00000548877 ZNF707Q96C28 371 aaPredicted RBP15.21■□□□□ 0.03
CDX2-202ENST00000548877 MYADMQ96S97 322 aa15.21■□□□□ 0.03
CDX2-202ENST00000548877 UNC45AQ9H3U1 944 aa15.21■□□□□ 0.03
CDX2-202ENST00000548877 IFT122Q9HBG6 1241 aa15.21■□□□□ 0.03
CDX2-202ENST00000548877 AGPAT5Q9NUQ2 364 aa15.21■□□□□ 0.03
CDX2-202ENST00000548877 FAN1Q9Y2M0 1017 aa15.21■□□□□ 0.03
CDX2-202ENST00000548877 KMT2BQ9UMN6 2715 aaPredicted RBP15.2■□□□□ 0.02
CDX2-202ENST00000548877 STK25O00506 426 aa15.2■□□□□ 0.02
CDX2-202ENST00000548877 TEX28O15482 410 aa15.2■□□□□ 0.02
CDX2-202ENST00000548877 PRPF3O43395 683 aaKnown RBP15.2■□□□□ 0.02
CDX2-202ENST00000548877 GAS7O60861 476 aa15.2■□□□□ 0.02
CDX2-202ENST00000548877 PSMD10O75832 226 aa15.2■□□□□ 0.02
CDX2-202ENST00000548877 URODP06132 367 aa15.2■□□□□ 0.02
CDX2-202ENST00000548877 GBP2P32456 591 aaPredicted RBP15.2■□□□□ 0.02
CDX2-202ENST00000548877 ADD1P35611 737 aaKnown RBP15.2■□□□□ 0.02
CDX2-202ENST00000548877 LONRF3Q496Y0 759 aa15.2■□□□□ 0.02
CDX2-202ENST00000548877 RNF20Q5VTR2 975 aa15.2■□□□□ 0.02
CDX2-202ENST00000548877 CATSPER4Q7RTX7 472 aa15.2■□□□□ 0.02
CDX2-202ENST00000548877 BICD2Q8TD16 824 aa15.2■□□□□ 0.02
CDX2-202ENST00000548877 TEKT3Q9BXF9 490 aa15.2■□□□□ 0.02
CDX2-202ENST00000548877 GBP3Q9H0R5 595 aa15.2■□□□□ 0.02
CDX2-202ENST00000548877 RSAD1Q9HA92 442 aa15.2■□□□□ 0.02
CDX2-202ENST00000548877 MARCH5Q9NX47 278 aa15.2■□□□□ 0.02
CDX2-202ENST00000548877 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.2■□□□□ 0.02
CDX2-202ENST00000548877 SUCLA2Q9P2R7 463 aaPredicted RBP15.2■□□□□ 0.02
CDX2-202ENST00000548877 SIT1Q9Y3P8 196 aa15.2■□□□□ 0.02
CDX2-202ENST00000548877 TPRP12270 2363 aaKnown RBP15.2■□□□□ 0.02
CDX2-202ENST00000548877 NID2Q14112 1375 aa15.2■□□□□ 0.02
CDX2-202ENST00000548877 EPG5Q9HCE0 2579 aa15.2■□□□□ 0.02
CDX2-202ENST00000548877 GPR179Q6PRD1 2367 aa15.19■□□□□ 0.02
CDX2-202ENST00000548877 KLF18A0A0U1RQI7 1052 aa15.19■□□□□ 0.02
CDX2-202ENST00000548877 CCDC196A0A1B0GTZ2 297 aa15.19■□□□□ 0.02
CDX2-202ENST00000548877 GLUD1P00367 558 aa15.19■□□□□ 0.02
CDX2-202ENST00000548877 LAMP2P13473 410 aa15.19■□□□□ 0.02
CDX2-202ENST00000548877 AFF1P51825 1210 aaKnown RBP15.19■□□□□ 0.02
CDX2-202ENST00000548877 STARD6P59095 220 aa15.19■□□□□ 0.02
CDX2-202ENST00000548877 ZNF528Q3MIS6 628 aa15.19■□□□□ 0.02
CDX2-202ENST00000548877 MTERF2Q49AM1 385 aa15.19■□□□□ 0.02
CDX2-202ENST00000548877 LRCH2Q5VUJ6 765 aa15.19■□□□□ 0.02
CDX2-202ENST00000548877 RHPN2Q8IUC4 686 aa15.19■□□□□ 0.02
CDX2-202ENST00000548877 GPR152Q8TDT2 470 aa15.19■□□□□ 0.02
CDX2-202ENST00000548877 RIN2Q8WYP3 895 aaPredicted RBP15.19■□□□□ 0.02
CDX2-202ENST00000548877 JPH2Q9BR39 696 aaPredicted RBP15.19■□□□□ 0.02
CDX2-202ENST00000548877 PLEKHA4Q9H4M7 779 aa15.19■□□□□ 0.02
CDX2-202ENST00000548877 ARHGEF3Q9NR81 526 aa15.19■□□□□ 0.02
CDX2-202ENST00000548877 ZDHHC7Q9NXF8 308 aa15.19■□□□□ 0.02
CDX2-202ENST00000548877 SEPT9Q9UHD8 586 aaPredicted RBP15.19■□□□□ 0.02
CDX2-202ENST00000548877 CA14Q9ULX7 337 aa15.19■□□□□ 0.02
CDX2-202ENST00000548877 ZFP37Q9Y6Q3 630 aaPredicted RBP15.19■□□□□ 0.02
CDX2-202ENST00000548877 MIA3Q5JRA6 1907 aa15.19■□□□□ 0.02
CDX2-202ENST00000548877 SSBP05455 408 aaKnown RBP eCLIP15.18■□□□□ 0.02
CDX2-202ENST00000548877 NCLP19338 710 aaKnown RBP15.18■□□□□ 0.02
CDX2-202ENST00000548877 HOXA11P31270 313 aaPredicted RBP15.18■□□□□ 0.02
CDX2-202ENST00000548877 DSG1Q02413 1049 aa15.18■□□□□ 0.02
CDX2-202ENST00000548877 DSC1Q08554 894 aa15.18■□□□□ 0.02
CDX2-202ENST00000548877 HTR4Q13639 388 aa15.18■□□□□ 0.02
CDX2-202ENST00000548877 Q4G0T1 1027 aa15.18■□□□□ 0.02
CDX2-202ENST00000548877 UBXN11Q5T124 520 aa15.18■□□□□ 0.02
CDX2-202ENST00000548877 POTEGQ6S5H5 508 aa15.18■□□□□ 0.02
CDX2-202ENST00000548877 TAS1R1Q7RTX1 841 aa15.18■□□□□ 0.02
CDX2-202ENST00000548877 SRGAP1Q7Z6B7 1085 aa15.18■□□□□ 0.02
CDX2-202ENST00000548877 COLGALT2Q8IYK4 626 aa15.18■□□□□ 0.02
CDX2-202ENST00000548877 MAML2Q8IZL2 1156 aaPredicted RBP15.18■□□□□ 0.02
CDX2-202ENST00000548877 CNNM3Q8NE01 707 aa15.18■□□□□ 0.02
CDX2-202ENST00000548877 SMG7Q92540 1137 aaKnown RBP15.18■□□□□ 0.02
CDX2-202ENST00000548877 TCEANC2Q96MN5 208 aa15.18■□□□□ 0.02
CDX2-202ENST00000548877 FAM193BQ96PV7 902 aaPredicted RBP15.18■□□□□ 0.02
CDX2-202ENST00000548877 NT5C3AQ9H0P0 336 aa15.18■□□□□ 0.02
CDX2-202ENST00000548877 UBN1Q9NPG3 1134 aa15.18■□□□□ 0.02
CDX2-202ENST00000548877 CHST7Q9NS84 486 aa15.18■□□□□ 0.02
CDX2-202ENST00000548877 DOCK6Q96HP0 2047 aa15.17■□□□□ 0.02
CDX2-202ENST00000548877 CYP3A7-CYP3A51PA0A087WV96 503 aa15.17■□□□□ 0.02
CDX2-202ENST00000548877 TMEM150BA6NC51 233 aa15.17■□□□□ 0.02
CDX2-202ENST00000548877 CHMP2AO43633 222 aa15.17■□□□□ 0.02
CDX2-202ENST00000548877 RFPL2O75678 378 aa15.17■□□□□ 0.02
CDX2-202ENST00000548877 DCNP07585 359 aaKnown RBP15.17■□□□□ 0.02
CDX2-202ENST00000548877 GLULP15104 373 aa15.17■□□□□ 0.02
CDX2-202ENST00000548877 RFX1P22670 979 aa15.17■□□□□ 0.02
CDX2-202ENST00000548877 CYP3A7P24462 503 aa15.17■□□□□ 0.02
CDX2-202ENST00000548877 GLUD2P49448 558 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms