RNA–Protein interactions for RNA: ENST00000548868.5

SCRN3-212, Transcript of secernin 3, humanhuman

TSL 2

Gene SCRN3, Length 1,594 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN3-212ENST00000548868 CELF4Q9BZC1 486 aaKnown RBP12.36□□□□□ -0.43
SCRN3-212ENST00000548868 CCDC113Q9H0I3 377 aa12.36□□□□□ -0.43
SCRN3-212ENST00000548868 TRPV6Q9H1D0 765 aa12.36□□□□□ -0.43
SCRN3-212ENST00000548868 CGNQ9P2M7 1197 aaKnown RBP12.36□□□□□ -0.43
SCRN3-212ENST00000548868 CTNND2Q9UQB3 1225 aa12.36□□□□□ -0.43
SCRN3-212ENST00000548868 MAPK8IP1Q9UQF2 711 aa12.36□□□□□ -0.43
SCRN3-212ENST00000548868 TRPV2Q9Y5S1 764 aa12.36□□□□□ -0.43
SCRN3-212ENST00000548868 TANC1Q9C0D5 1861 aa12.36□□□□□ -0.43
SCRN3-212ENST00000548868 DCDC2CA8MYV0 355 aa12.35□□□□□ -0.43
SCRN3-212ENST00000548868 PDXKO00764 312 aa12.35□□□□□ -0.43
SCRN3-212ENST00000548868 MBTD1Q05BQ5 628 aa12.35□□□□□ -0.43
SCRN3-212ENST00000548868 LRRC63Q05C16 580 aa12.35□□□□□ -0.43
SCRN3-212ENST00000548868 HSP90AA2PQ14568 343 aaPredicted RBP12.35□□□□□ -0.43
SCRN3-212ENST00000548868 FAM187BQ17R55 369 aa12.35□□□□□ -0.43
SCRN3-212ENST00000548868 KIZQ2M2Z5 673 aa12.35□□□□□ -0.43
SCRN3-212ENST00000548868 FAM26DQ5JW98 314 aa12.35□□□□□ -0.43
SCRN3-212ENST00000548868 NELFCDQ8IXH7 590 aa12.35□□□□□ -0.43
SCRN3-212ENST00000548868 SYCP3Q8IZU3 236 aa12.35□□□□□ -0.43
SCRN3-212ENST00000548868 GOLGA5Q8TBA6 731 aa12.35□□□□□ -0.43
SCRN3-212ENST00000548868 FAM200AQ8TCP9 573 aa12.35□□□□□ -0.43
SCRN3-212ENST00000548868 DHX38Q92620 1227 aaKnown RBP12.35□□□□□ -0.43
SCRN3-212ENST00000548868 PRIMPOLQ96LW4 560 aa12.35□□□□□ -0.43
SCRN3-212ENST00000548868 TSG101Q99816 390 aa12.35□□□□□ -0.43
SCRN3-212ENST00000548868 KCTD10Q9H3F6 313 aa12.35□□□□□ -0.43
SCRN3-212ENST00000548868 FZD8Q9H461 694 aa12.35□□□□□ -0.43
SCRN3-212ENST00000548868 TYW1Q9NV66 732 aaKnown RBP12.35□□□□□ -0.43
SCRN3-212ENST00000548868 PRMT7Q9NVM4 692 aaPredicted RBP12.35□□□□□ -0.43
SCRN3-212ENST00000548868 TRAF3IP3Q9Y228 551 aa12.35□□□□□ -0.43
SCRN3-212ENST00000548868 ZMYM2Q9UBW7 1377 aa12.35□□□□□ -0.43
SCRN3-212ENST00000548868 SMTNL1A8MU46 457 aa12.35□□□□□ -0.43
SCRN3-212ENST00000548868 INO80B-WBP1J3KQ70 363 aa12.35□□□□□ -0.43
SCRN3-212ENST00000548868 CALUO43852 315 aaPredicted RBP12.35□□□□□ -0.43
SCRN3-212ENST00000548868 PIGRP01833 764 aa12.35□□□□□ -0.43
SCRN3-212ENST00000548868 PRKCBP05771 671 aa12.35□□□□□ -0.43
SCRN3-212ENST00000548868 DARSP14868 501 aaKnown RBP12.35□□□□□ -0.43
SCRN3-212ENST00000548868 EIF4BP23588 611 aaKnown RBP12.35□□□□□ -0.43
SCRN3-212ENST00000548868 HOXD13P35453 343 aa12.35□□□□□ -0.43
SCRN3-212ENST00000548868 THPOP40225 353 aa12.35□□□□□ -0.43
SCRN3-212ENST00000548868 ATN1P54259 1190 aaPredicted RBP12.35□□□□□ -0.43
SCRN3-212ENST00000548868 MGAT3Q09327 533 aa12.35□□□□□ -0.43
SCRN3-212ENST00000548868 TMEM62Q0P6H9 643 aa12.35□□□□□ -0.43
SCRN3-212ENST00000548868 BFSP2Q13515 415 aa12.35□□□□□ -0.43
SCRN3-212ENST00000548868 HS2ST1Q7LGA3 356 aa12.35□□□□□ -0.43
SCRN3-212ENST00000548868 TAS1R3Q7RTX0 852 aa12.35□□□□□ -0.43
SCRN3-212ENST00000548868 ENOX1Q8TC92 643 aaKnown RBP12.35□□□□□ -0.43
SCRN3-212ENST00000548868 WNT8BQ93098 351 aa12.35□□□□□ -0.43
SCRN3-212ENST00000548868 PPP1R16BQ96T49 567 aa12.35□□□□□ -0.43
SCRN3-212ENST00000548868 GBP3Q9H0R5 595 aa12.35□□□□□ -0.43
SCRN3-212ENST00000548868 SEMA6BQ9H3T3 888 aa12.35□□□□□ -0.43
SCRN3-212ENST00000548868 CDY2AQ9Y6F7 541 aa12.35□□□□□ -0.43
SCRN3-212ENST00000548868 BRCA2P51587 3418 aa12.34□□□□□ -0.43
SCRN3-212ENST00000548868 ALPK3Q96L96 1907 aa12.34□□□□□ -0.43
SCRN3-212ENST00000548868 ACKR2O00590 384 aa12.34□□□□□ -0.43
SCRN3-212ENST00000548868 IKBKBO14920 756 aa12.34□□□□□ -0.43
SCRN3-212ENST00000548868 PQBP1O60828 265 aaKnown RBP12.34□□□□□ -0.43
SCRN3-212ENST00000548868 EN2P19622 333 aaPredicted RBP12.34□□□□□ -0.43
SCRN3-212ENST00000548868 MYL5Q02045 173 aa12.34□□□□□ -0.43
SCRN3-212ENST00000548868 KCNA1Q09470 495 aa12.34□□□□□ -0.43
SCRN3-212ENST00000548868 NFIL3Q16649 462 aa12.34□□□□□ -0.43
SCRN3-212ENST00000548868 EDRF1Q3B7T1 1238 aa12.34□□□□□ -0.43
SCRN3-212ENST00000548868 TRIM60Q495X7 471 aa12.34□□□□□ -0.43
SCRN3-212ENST00000548868 ZCWPW2Q504Y3 356 aa12.34□□□□□ -0.43
SCRN3-212ENST00000548868 ZPBP2Q6X784 338 aa12.34□□□□□ -0.43
SCRN3-212ENST00000548868 UBE2Q1Q7Z7E8 422 aa12.34□□□□□ -0.43
SCRN3-212ENST00000548868 TMEM174Q8WUU8 243 aa12.34□□□□□ -0.43
SCRN3-212ENST00000548868 ZNF668Q96K58 619 aaPredicted RBP12.34□□□□□ -0.43
SCRN3-212ENST00000548868 OSMRQ99650 979 aa12.34□□□□□ -0.43
SCRN3-212ENST00000548868 MRPL4Q9BYD3 311 aaKnown RBP12.34□□□□□ -0.43
SCRN3-212ENST00000548868 CBX8Q9HC52 389 aa12.34□□□□□ -0.43
SCRN3-212ENST00000548868 SQORQ9Y6N5 450 aa12.34□□□□□ -0.43
SCRN3-212ENST00000548868 BECN2A8MW95 431 aa12.33□□□□□ -0.44
SCRN3-212ENST00000548868 TGFB1I1O43294 461 aa12.33□□□□□ -0.44
SCRN3-212ENST00000548868 CHRNA1P02708 482 aa12.33□□□□□ -0.44
SCRN3-212ENST00000548868 CKBP12277 381 aa12.33□□□□□ -0.44
SCRN3-212ENST00000548868 SFPQP23246 707 aaKnown RBP eCLIP12.33□□□□□ -0.44
SCRN3-212ENST00000548868 STX17P56962 302 aa12.33□□□□□ -0.44
SCRN3-212ENST00000548868 TLE2Q04725 743 aa12.33□□□□□ -0.44
SCRN3-212ENST00000548868 MYBPC2Q14324 1141 aa12.33□□□□□ -0.44
SCRN3-212ENST00000548868 IQCB1Q15051 598 aa12.33□□□□□ -0.44
SCRN3-212ENST00000548868 SPATA1Q5VX52 437 aa12.33□□□□□ -0.44
SCRN3-212ENST00000548868 ANKRD40Q6AI12 368 aa12.33□□□□□ -0.44
SCRN3-212ENST00000548868 TTI2Q6NXR4 508 aa12.33□□□□□ -0.44
SCRN3-212ENST00000548868 C12orf56Q8IXR9 622 aa12.33□□□□□ -0.44
SCRN3-212ENST00000548868 USP38Q8NB14 1042 aa12.33□□□□□ -0.44
SCRN3-212ENST00000548868 BICD1Q96G01 975 aa12.33□□□□□ -0.44
SCRN3-212ENST00000548868 MINDY3Q9H8M7 445 aa12.33□□□□□ -0.44
SCRN3-212ENST00000548868 CDHR5Q9HBB8 845 aa12.33□□□□□ -0.44
SCRN3-212ENST00000548868 GINS2Q9Y248 185 aa12.33□□□□□ -0.44
SCRN3-212ENST00000548868 CNTNAP2Q9UHC6 1331 aa12.32□□□□□ -0.44
SCRN3-212ENST00000548868 TRIM49BA6NDI0 452 aa12.32□□□□□ -0.44
SCRN3-212ENST00000548868 HNRNPDLO14979 420 aaKnown RBP12.32□□□□□ -0.44
SCRN3-212ENST00000548868 OFD1O75665 1012 aa12.32□□□□□ -0.44
SCRN3-212ENST00000548868 ERLIN2O94905 339 aa12.32□□□□□ -0.44
SCRN3-212ENST00000548868 FGFR1OPO95684 399 aaKnown RBP12.32□□□□□ -0.44
SCRN3-212ENST00000548868 CTSHP09668 335 aa12.32□□□□□ -0.44
SCRN3-212ENST00000548868 RPL13P26373 211 aaKnown RBP12.32□□□□□ -0.44
SCRN3-212ENST00000548868 AXLP30530 894 aa12.32□□□□□ -0.44
SCRN3-212ENST00000548868 LIG4P49917 911 aa12.32□□□□□ -0.44
SCRN3-212ENST00000548868 PMS1P54277 932 aaKnown RBP12.32□□□□□ -0.44
SCRN3-212ENST00000548868 FKBP3Q00688 224 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms