RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 ANKRD13AQ8IZ07 590 aa5.63□□□□□ -1.51
DEPDC4-205ENST00000548313 C1orf162Q8NEQ5 155 aaPredicted RBP5.63□□□□□ -1.51
DEPDC4-205ENST00000548313 FAXDC2Q96IV6 333 aa5.63□□□□□ -1.51
DEPDC4-205ENST00000548313 RBM15Q96T37 977 aaKnown RBP eCLIP5.63□□□□□ -1.51
DEPDC4-205ENST00000548313 ASPSCR1Q9BZE9 553 aa5.63□□□□□ -1.51
DEPDC4-205ENST00000548313 QRSL1Q9H0R6 528 aaKnown RBP5.63□□□□□ -1.51
DEPDC4-205ENST00000548313 CCDC8Q9H0W5 538 aaPredicted RBP5.63□□□□□ -1.51
DEPDC4-205ENST00000548313 MEGF9Q9H1U4 602 aa5.63□□□□□ -1.51
DEPDC4-205ENST00000548313 C12orf65Q9H3J6 166 aaKnown RBP5.63□□□□□ -1.51
DEPDC4-205ENST00000548313 IFT122Q9HBG6 1241 aa5.63□□□□□ -1.51
DEPDC4-205ENST00000548313 SMPD4Q9NXE4 827 aa5.63□□□□□ -1.51
DEPDC4-205ENST00000548313 OAZ3Q9UMX2 235 aa5.63□□□□□ -1.51
DEPDC4-205ENST00000548313 MATN3O15232 486 aa5.62□□□□□ -1.51
DEPDC4-205ENST00000548313 PDGFRBP09619 1106 aa5.62□□□□□ -1.51
DEPDC4-205ENST00000548313 LTA4HP09960 611 aaKnown RBP5.62□□□□□ -1.51
DEPDC4-205ENST00000548313 AGXTP21549 392 aa5.62□□□□□ -1.51
DEPDC4-205ENST00000548313 RPS19P39019 145 aaKnown RBP5.62□□□□□ -1.51
DEPDC4-205ENST00000548313 WNT3AP56704 352 aa5.62□□□□□ -1.51
DEPDC4-205ENST00000548313 BPIFB4P59827 614 aa5.62□□□□□ -1.51
DEPDC4-205ENST00000548313 SRSF2Q01130 221 aaKnown RBP5.62□□□□□ -1.51
DEPDC4-205ENST00000548313 MGAT5Q09328 741 aa5.62□□□□□ -1.51
DEPDC4-205ENST00000548313 FAM180AQ6UWF9 173 aa5.62□□□□□ -1.51
DEPDC4-205ENST00000548313 BTNL9Q6UXG8 535 aa5.62□□□□□ -1.51
DEPDC4-205ENST00000548313 CIR1Q86X95 450 aaPredicted RBP5.62□□□□□ -1.51
DEPDC4-205ENST00000548313 FUBP3Q96I24 572 aaKnown RBP eCLIP5.62□□□□□ -1.51
DEPDC4-205ENST00000548313 LRRC37BQ96QE4 947 aa5.62□□□□□ -1.51
DEPDC4-205ENST00000548313 CEP89Q96ST8 783 aa5.62□□□□□ -1.51
DEPDC4-205ENST00000548313 SLC13A1Q9BZW2 595 aa5.62□□□□□ -1.51
DEPDC4-205ENST00000548313 ZNF277Q9NRM2 450 aaPredicted RBP5.62□□□□□ -1.51
DEPDC4-205ENST00000548313 MKS1Q9NXB0 559 aa5.62□□□□□ -1.51
DEPDC4-205ENST00000548313 GPR45Q9Y5Y3 372 aa5.62□□□□□ -1.51
DEPDC4-205ENST00000548313 MRFAP1Q9Y605 127 aa5.62□□□□□ -1.51
DEPDC4-205ENST00000548313 KLHL33A6NCF5 533 aa5.61□□□□□ -1.51
DEPDC4-205ENST00000548313 C1QTNF3-AMACRE9PGA6 284 aa5.61□□□□□ -1.51
DEPDC4-205ENST00000548313 CDC14BO60729 498 aa5.61□□□□□ -1.51
DEPDC4-205ENST00000548313 ALDH1A2O94788 518 aa5.61□□□□□ -1.51
DEPDC4-205ENST00000548313 TOX4O94842 621 aa5.61□□□□□ -1.51
DEPDC4-205ENST00000548313 MYBL2P10244 700 aa5.61□□□□□ -1.51
DEPDC4-205ENST00000548313 IARSP41252 1262 aaKnown RBP5.61□□□□□ -1.51
DEPDC4-205ENST00000548313 CDK17Q00537 523 aa5.61□□□□□ -1.51
DEPDC4-205ENST00000548313 TAX1BP1Q86VP1 789 aa5.61□□□□□ -1.51
DEPDC4-205ENST00000548313 ANKRD53Q8N9V6 530 aa5.61□□□□□ -1.51
DEPDC4-205ENST00000548313 SLC16A11Q8NCK7 471 aa5.61□□□□□ -1.51
DEPDC4-205ENST00000548313 GIMAP8Q8ND71 665 aaPredicted RBP5.61□□□□□ -1.51
DEPDC4-205ENST00000548313 PIK3C3Q8NEB9 887 aa5.61□□□□□ -1.51
DEPDC4-205ENST00000548313 SHCBP1Q8NEM2 672 aa5.61□□□□□ -1.51
DEPDC4-205ENST00000548313 TSPEARQ8WU66 669 aa5.61□□□□□ -1.51
DEPDC4-205ENST00000548313 PTPN18Q99952 460 aa5.61□□□□□ -1.51
DEPDC4-205ENST00000548313 SSBP3Q9BWW4 388 aaPredicted RBP5.61□□□□□ -1.51
DEPDC4-205ENST00000548313 ZBTB21Q9ULJ3 1066 aa5.61□□□□□ -1.51
DEPDC4-205ENST00000548313 RPTORQ8N122 1335 aa5.6□□□□□ -1.51
DEPDC4-205ENST00000548313 NRP1O14786 923 aa5.6□□□□□ -1.51
DEPDC4-205ENST00000548313 PHF2O75151 1096 aa5.6□□□□□ -1.51
DEPDC4-205ENST00000548313 FSHBP01225 129 aa5.6□□□□□ -1.51
DEPDC4-205ENST00000548313 UBE3CQ15386 1083 aa5.6□□□□□ -1.51
DEPDC4-205ENST00000548313 CLUL1Q15846 466 aa5.6□□□□□ -1.51
DEPDC4-205ENST00000548313 ADRM1Q16186 407 aa5.6□□□□□ -1.51
DEPDC4-205ENST00000548313 MUM1L1Q5H9M0 696 aa5.6□□□□□ -1.51
DEPDC4-205ENST00000548313 MBNL2Q5VZF2 373 aaKnown RBP5.6□□□□□ -1.51
DEPDC4-205ENST00000548313 KRT40Q6A162 431 aa5.6□□□□□ -1.51
DEPDC4-205ENST00000548313 SNX33Q8WV41 574 aa5.6□□□□□ -1.51
DEPDC4-205ENST00000548313 STAG1Q8WVM7 1258 aa5.6□□□□□ -1.51
DEPDC4-205ENST00000548313 RPL10LQ96L21 214 aaKnown RBP5.6□□□□□ -1.51
DEPDC4-205ENST00000548313 SAMD11Q96NU1 681 aa5.6□□□□□ -1.51
DEPDC4-205ENST00000548313 SORCS2Q96PQ0 1159 aa5.6□□□□□ -1.51
DEPDC4-205ENST00000548313 DPYSL5Q9BPU6 564 aa5.6□□□□□ -1.51
DEPDC4-205ENST00000548313 ACE2Q9BYF1 805 aaPredicted RBP5.6□□□□□ -1.51
DEPDC4-205ENST00000548313 GREM2Q9H772 168 aa5.6□□□□□ -1.51
DEPDC4-205ENST00000548313 TNKSO95271 1327 aa5.59□□□□□ -1.51
DEPDC4-205ENST00000548313 GPR42O15529 346 aa5.59□□□□□ -1.51
DEPDC4-205ENST00000548313 RAD17O75943 681 aa5.59□□□□□ -1.51
DEPDC4-205ENST00000548313 MT-CO1P00395 513 aa5.59□□□□□ -1.51
DEPDC4-205ENST00000548313 GASTP01350 101 aa5.59□□□□□ -1.51
DEPDC4-205ENST00000548313 CCND1P24385 295 aa5.59□□□□□ -1.51
DEPDC4-205ENST00000548313 CTSSP25774 331 aa5.59□□□□□ -1.51
DEPDC4-205ENST00000548313 ADAM8P78325 824 aa5.59□□□□□ -1.51
DEPDC4-205ENST00000548313 MALLQ13021 153 aa5.59□□□□□ -1.51
DEPDC4-205ENST00000548313 DUSP8Q13202 625 aa5.59□□□□□ -1.51
DEPDC4-205ENST00000548313 RIN1Q13671 783 aa5.59□□□□□ -1.51
DEPDC4-205ENST00000548313 ABCB5Q2M3G0 1257 aa5.59□□□□□ -1.51
DEPDC4-205ENST00000548313 TCTN3Q6NUS6 607 aa5.59□□□□□ -1.51
DEPDC4-205ENST00000548313 LIMS2Q7Z4I7 341 aa5.59□□□□□ -1.51
DEPDC4-205ENST00000548313 CMTM4Q8IZR5 234 aa5.59□□□□□ -1.51
DEPDC4-205ENST00000548313 TTC9BQ8N6N2 239 aa5.59□□□□□ -1.51
DEPDC4-205ENST00000548313 GLB1L3Q8NCI6 653 aaPredicted RBP5.59□□□□□ -1.51
DEPDC4-205ENST00000548313 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.59□□□□□ -1.51
DEPDC4-205ENST00000548313 GPR156Q8NFN8 814 aa5.59□□□□□ -1.51
DEPDC4-205ENST00000548313 GNRHR2Q96P88 292 aa5.59□□□□□ -1.51
DEPDC4-205ENST00000548313 GPHA2Q96T91 129 aa5.59□□□□□ -1.51
DEPDC4-205ENST00000548313 IL23AQ9NPF7 189 aa5.59□□□□□ -1.51
DEPDC4-205ENST00000548313 SCOCQ9UIL1 159 aa5.59□□□□□ -1.51
DEPDC4-205ENST00000548313 SLC30A1Q9Y6M5 507 aa5.59□□□□□ -1.51
DEPDC4-205ENST00000548313 A0A1W2PRX2 142 aa5.58□□□□□ -1.52
DEPDC4-205ENST00000548313 PATE3B3GLJ2 98 aa5.58□□□□□ -1.52
DEPDC4-205ENST00000548313 FZD9O00144 591 aa5.58□□□□□ -1.52
DEPDC4-205ENST00000548313 NPEPPSP55786 919 aa5.58□□□□□ -1.52
DEPDC4-205ENST00000548313 PTPN21Q16825 1174 aa5.58□□□□□ -1.52
DEPDC4-205ENST00000548313 ADGRE4PQ86SQ3 457 aa5.58□□□□□ -1.52
DEPDC4-205ENST00000548313 PNMA8AQ86V59 439 aaPredicted RBP5.58□□□□□ -1.52
DEPDC4-205ENST00000548313 GPR135Q8IZ08 494 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms