RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 LRCH3Q96II8 777 aa15.96■□□□□ 0.15
DDX54-203ENST00000546869 ST6GALNAC4Q9H4F1 302 aa15.96■□□□□ 0.15
DDX54-203ENST00000546869 KMT5AQ9NQR1 393 aa15.96■□□□□ 0.15
DDX54-203ENST00000546869 SEL1LQ9UBV2 794 aa15.96■□□□□ 0.15
DDX54-203ENST00000546869 YBX2Q9Y2T7 364 aaKnown RBP15.96■□□□□ 0.15
DDX54-203ENST00000546869 TTC3P53804 2025 aa15.95■□□□□ 0.14
DDX54-203ENST00000546869 ADGRA3Q8IWK6 1321 aa15.95■□□□□ 0.14
DDX54-203ENST00000546869 CNTNAP2Q9UHC6 1331 aa15.95■□□□□ 0.14
DDX54-203ENST00000546869 RBAK-RBAKDNI3L0D1 243 aa15.95■□□□□ 0.14
DDX54-203ENST00000546869 HOXA2O43364 376 aa15.95■□□□□ 0.14
DDX54-203ENST00000546869 TRAK2O60296 914 aa15.95■□□□□ 0.14
DDX54-203ENST00000546869 TBCAO75347 108 aaKnown RBP15.95■□□□□ 0.14
DDX54-203ENST00000546869 FAM13AO94988 1023 aa15.95■□□□□ 0.14
DDX54-203ENST00000546869 SLFN14P0C7P3 912 aa15.95■□□□□ 0.14
DDX54-203ENST00000546869 PFKFB1P16118 471 aa15.95■□□□□ 0.14
DDX54-203ENST00000546869 GAP43P17677 238 aa15.95■□□□□ 0.14
DDX54-203ENST00000546869 ARF4P18085 180 aaPredicted RBP15.95■□□□□ 0.14
DDX54-203ENST00000546869 PBX2P40425 430 aa15.95■□□□□ 0.14
DDX54-203ENST00000546869 RABGGTBP53611 331 aa15.95■□□□□ 0.14
DDX54-203ENST00000546869 UBXN11Q5T124 520 aa15.95■□□□□ 0.14
DDX54-203ENST00000546869 TWF2Q6IBS0 349 aaKnown RBP15.95■□□□□ 0.14
DDX54-203ENST00000546869 TMCO2Q7Z6W1 182 aaPredicted RBP15.95■□□□□ 0.14
DDX54-203ENST00000546869 MYCT1Q8N699 235 aa15.95■□□□□ 0.14
DDX54-203ENST00000546869 TMEM161BQ8NDZ6 487 aa15.95■□□□□ 0.14
DDX54-203ENST00000546869 MRPS27Q92552 414 aaKnown RBP15.95■□□□□ 0.14
DDX54-203ENST00000546869 DHX58Q96C10 678 aa15.95■□□□□ 0.14
DDX54-203ENST00000546869 TIFAQ96CG3 184 aa15.95■□□□□ 0.14
DDX54-203ENST00000546869 C7orf25Q9BPX7 421 aa15.95■□□□□ 0.14
DDX54-203ENST00000546869 GDPD2Q9HCC8 539 aa15.95■□□□□ 0.14
DDX54-203ENST00000546869 FAM105AQ9NUU6 356 aa15.95■□□□□ 0.14
DDX54-203ENST00000546869 LRFN2Q9ULH4 789 aa15.95■□□□□ 0.14
DDX54-203ENST00000546869 COL4A6Q14031 1691 aa15.95■□□□□ 0.14
DDX54-203ENST00000546869 A0A1B0GVL5 298 aa15.94■□□□□ 0.14
DDX54-203ENST00000546869 UPP2O95045 317 aa15.94■□□□□ 0.14
DDX54-203ENST00000546869 PRKCBP05771 671 aa15.94■□□□□ 0.14
DDX54-203ENST00000546869 MYL1P05976 194 aa15.94■□□□□ 0.14
DDX54-203ENST00000546869 CACNB1Q02641 598 aaPredicted RBP15.94■□□□□ 0.14
DDX54-203ENST00000546869 PRPF4BQ13523 1007 aaKnown RBP15.94■□□□□ 0.14
DDX54-203ENST00000546869 SLC27A1Q6PCB7 646 aa15.94■□□□□ 0.14
DDX54-203ENST00000546869 CLEC17AQ6ZS10 378 aa15.94■□□□□ 0.14
DDX54-203ENST00000546869 FIZ1Q96SL8 496 aa15.94■□□□□ 0.14
DDX54-203ENST00000546869 TRIM9Q9C026 710 aa15.94■□□□□ 0.14
DDX54-203ENST00000546869 SLC28A3Q9HAS3 691 aa15.94■□□□□ 0.14
DDX54-203ENST00000546869 OLFML3Q9NRN5 406 aa15.94■□□□□ 0.14
DDX54-203ENST00000546869 GOLGA6L4A6NEF3 574 aa15.93■□□□□ 0.14
DDX54-203ENST00000546869 N4BP3O15049 544 aa15.93■□□□□ 0.14
DDX54-203ENST00000546869 SLC16A4O15374 487 aa15.93■□□□□ 0.14
DDX54-203ENST00000546869 B4GALT5O43286 388 aa15.93■□□□□ 0.14
DDX54-203ENST00000546869 ACTN4O43707 911 aaKnown RBP15.93■□□□□ 0.14
DDX54-203ENST00000546869 CA3P07451 260 aa15.93■□□□□ 0.14
DDX54-203ENST00000546869 GTF2BQ00403 316 aa15.93■□□□□ 0.14
DDX54-203ENST00000546869 DYMQ7RTS9 669 aa15.93■□□□□ 0.14
DDX54-203ENST00000546869 TAS1R3Q7RTX0 852 aa15.93■□□□□ 0.14
DDX54-203ENST00000546869 HAUS6Q7Z4H7 955 aa15.93■□□□□ 0.14
DDX54-203ENST00000546869 CMTR2Q8IYT2 770 aaKnown RBP15.93■□□□□ 0.14
DDX54-203ENST00000546869 CEP57L1Q8IYX8 460 aa15.93■□□□□ 0.14
DDX54-203ENST00000546869 TMEM87AQ8NBN3 555 aa15.93■□□□□ 0.14
DDX54-203ENST00000546869 PGBD4Q96DM1 585 aa15.93■□□□□ 0.14
DDX54-203ENST00000546869 YME1L1Q96TA2 773 aa15.93■□□□□ 0.14
DDX54-203ENST00000546869 KIFC3Q9BVG8 833 aa15.93■□□□□ 0.14
DDX54-203ENST00000546869 NKX2-4Q9H2Z4 354 aa15.93■□□□□ 0.14
DDX54-203ENST00000546869 ZNF576Q9H609 170 aa15.93■□□□□ 0.14
DDX54-203ENST00000546869 UBN1Q9NPG3 1134 aa15.93■□□□□ 0.14
DDX54-203ENST00000546869 TNFSF13BQ9Y275 285 aa15.93■□□□□ 0.14
DDX54-203ENST00000546869 PCDHB2Q9Y5E7 798 aa15.93■□□□□ 0.14
DDX54-203ENST00000546869 PVALEFA0A1B0GWK0 134 aa15.92■□□□□ 0.14
DDX54-203ENST00000546869 MYOGP15173 224 aa15.92■□□□□ 0.14
DDX54-203ENST00000546869 ATF7P17544 494 aaPredicted RBP15.92■□□□□ 0.14
DDX54-203ENST00000546869 SYKP43405 635 aa15.92■□□□□ 0.14
DDX54-203ENST00000546869 NDUFA8P51970 172 aa15.92■□□□□ 0.14
DDX54-203ENST00000546869 LONRF3Q496Y0 759 aa15.92■□□□□ 0.14
DDX54-203ENST00000546869 ZNF697Q5TEC3 545 aa15.92■□□□□ 0.14
DDX54-203ENST00000546869 NT5DC1Q5TFE4 455 aa15.92■□□□□ 0.14
DDX54-203ENST00000546869 FAM117BQ6P1L5 589 aa15.92■□□□□ 0.14
DDX54-203ENST00000546869 ZNF720Q7Z2F6 126 aa15.92■□□□□ 0.14
DDX54-203ENST00000546869 FAM178BQ8IXR5 827 aa15.92■□□□□ 0.14
DDX54-203ENST00000546869 FSIP1Q8NA03 581 aa15.92■□□□□ 0.14
DDX54-203ENST00000546869 CPB2Q96IY4 423 aa15.92■□□□□ 0.14
DDX54-203ENST00000546869 ACO2Q99798 780 aaKnown RBP15.92■□□□□ 0.14
DDX54-203ENST00000546869 STRA6Q9BX79 667 aa15.92■□□□□ 0.14
DDX54-203ENST00000546869 MRPL4Q9BYD3 311 aaKnown RBP15.92■□□□□ 0.14
DDX54-203ENST00000546869 TMEM117Q9H0C3 514 aa15.92■□□□□ 0.14
DDX54-203ENST00000546869 SEMA6BQ9H3T3 888 aa15.92■□□□□ 0.14
DDX54-203ENST00000546869 PTPRHQ9HD43 1115 aa15.92■□□□□ 0.14
DDX54-203ENST00000546869 SERTAD1Q9UHV2 236 aa15.92■□□□□ 0.14
DDX54-203ENST00000546869 LINC01553A4QN01 128 aa15.91■□□□□ 0.14
DDX54-203ENST00000546869 EDN1P05305 212 aa15.91■□□□□ 0.14
DDX54-203ENST00000546869 TAP1Q03518 808 aa15.91■□□□□ 0.14
DDX54-203ENST00000546869 STRN3Q13033 797 aa15.91■□□□□ 0.14
DDX54-203ENST00000546869 ATF7IP2Q5U623 682 aa15.91■□□□□ 0.14
DDX54-203ENST00000546869 ZPBP2Q6X784 338 aa15.91■□□□□ 0.14
DDX54-203ENST00000546869 APBB1IPQ7Z5R6 666 aaPredicted RBP15.91■□□□□ 0.14
DDX54-203ENST00000546869 CCDC65Q8IXS2 484 aa15.91■□□□□ 0.14
DDX54-203ENST00000546869 FIBCD1Q8N539 461 aa15.91■□□□□ 0.14
DDX54-203ENST00000546869 SMG8Q8ND04 991 aaKnown RBP15.91■□□□□ 0.14
DDX54-203ENST00000546869 ENGASEQ8NFI3 743 aa15.91■□□□□ 0.14
DDX54-203ENST00000546869 CLP1Q92989 425 aaKnown RBP15.91■□□□□ 0.14
DDX54-203ENST00000546869 HVCN1Q96D96 273 aa15.91■□□□□ 0.14
DDX54-203ENST00000546869 PAGE5Q96GU1 130 aa15.91■□□□□ 0.14
DDX54-203ENST00000546869 SAMD11Q96NU1 681 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms