RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 CRNKL1Q9BZJ0 848 aaKnown RBP7.82□□□□□ -1.16
CCDC60-205ENST00000546345 IRF2BPLQ9H1B7 796 aa7.82□□□□□ -1.16
CCDC60-205ENST00000546345 ACAD9Q9H845 621 aa7.82□□□□□ -1.16
CCDC60-205ENST00000546345 KANSL2Q9H9L4 492 aa7.82□□□□□ -1.16
CCDC60-205ENST00000546345 VTA1Q9NP79 307 aa7.82□□□□□ -1.16
CCDC60-205ENST00000546345 RAD18Q9NS91 495 aa7.82□□□□□ -1.16
CCDC60-205ENST00000546345 RNF146Q9NTX7 359 aa7.82□□□□□ -1.16
CCDC60-205ENST00000546345 CLEC1BQ9P126 229 aa7.82□□□□□ -1.16
CCDC60-205ENST00000546345 CTNNA3Q9UI47 895 aa7.82□□□□□ -1.16
CCDC60-205ENST00000546345 CD207Q9UJ71 328 aa7.82□□□□□ -1.16
CCDC60-205ENST00000546345 INSL6Q9Y581 213 aa7.82□□□□□ -1.16
CCDC60-205ENST00000546345 MIA3Q5JRA6 1907 aa7.82□□□□□ -1.16
CCDC60-205ENST00000546345 GRM6O15303 877 aa7.81□□□□□ -1.16
CCDC60-205ENST00000546345 EIF5BO60841 1220 aaKnown RBP7.81□□□□□ -1.16
CCDC60-205ENST00000546345 CTSHP09668 335 aa7.81□□□□□ -1.16
CCDC60-205ENST00000546345 PTPN11Q06124 597 aaPredicted RBP7.81□□□□□ -1.16
CCDC60-205ENST00000546345 PTGISQ16647 500 aa7.81□□□□□ -1.16
CCDC60-205ENST00000546345 MEI1Q5TIA1 1274 aa7.81□□□□□ -1.16
CCDC60-205ENST00000546345 C12orf60Q5U649 245 aa7.81□□□□□ -1.16
CCDC60-205ENST00000546345 RASGRP2Q7LDG7 609 aa7.81□□□□□ -1.16
CCDC60-205ENST00000546345 SESTD1Q86VW0 696 aa7.81□□□□□ -1.16
CCDC60-205ENST00000546345 TMEM192Q8IY95 271 aa7.81□□□□□ -1.16
CCDC60-205ENST00000546345 COPS5Q92905 334 aa7.81□□□□□ -1.16
CCDC60-205ENST00000546345 KCNB2Q92953 911 aa7.81□□□□□ -1.16
CCDC60-205ENST00000546345 NKD2Q969F2 451 aaPredicted RBP7.81□□□□□ -1.16
CCDC60-205ENST00000546345 CRELD1Q96HD1 420 aa7.81□□□□□ -1.16
CCDC60-205ENST00000546345 CCDC17Q96LX7 622 aa7.81□□□□□ -1.16
CCDC60-205ENST00000546345 SAMD11Q96NU1 681 aa7.81□□□□□ -1.16
CCDC60-205ENST00000546345 CBX8Q9HC52 389 aa7.81□□□□□ -1.16
CCDC60-205ENST00000546345 SMC4Q9NTJ3 1288 aa7.81□□□□□ -1.16
CCDC60-205ENST00000546345 CYP39A1Q9NYL5 469 aa7.81□□□□□ -1.16
CCDC60-205ENST00000546345 CACNA1IQ9P0X4 2223 aa7.8□□□□□ -1.16
CCDC60-205ENST00000546345 ZNF532Q9HCE3 1301 aa7.8□□□□□ -1.16
CCDC60-205ENST00000546345 IGKV6D-41A0A0C4DH26 115 aa7.8□□□□□ -1.16
CCDC60-205ENST00000546345 C5orf67F2Z3F1 127 aa7.8□□□□□ -1.16
CCDC60-205ENST00000546345 F5H6K3 240 aa7.8□□□□□ -1.16
CCDC60-205ENST00000546345 CHGBP05060 677 aa7.8□□□□□ -1.16
CCDC60-205ENST00000546345 BMP6P22004 513 aa7.8□□□□□ -1.16
CCDC60-205ENST00000546345 ICAM3P32942 547 aa7.8□□□□□ -1.16
CCDC60-205ENST00000546345 CPT1AP50416 773 aa7.8□□□□□ -1.16
CCDC60-205ENST00000546345 TERF1P54274 439 aa7.8□□□□□ -1.16
CCDC60-205ENST00000546345 KLRC3Q07444 240 aa7.8□□□□□ -1.16
CCDC60-205ENST00000546345 PTPN21Q16825 1174 aa7.8□□□□□ -1.16
CCDC60-205ENST00000546345 ALDH1L2Q3SY69 923 aa7.8□□□□□ -1.16
CCDC60-205ENST00000546345 DGLUCYQ7Z3D6 616 aa7.8□□□□□ -1.16
CCDC60-205ENST00000546345 ADGRD2Q7Z7M1 963 aa7.8□□□□□ -1.16
CCDC60-205ENST00000546345 MYOCDQ8IZQ8 938 aa7.8□□□□□ -1.16
CCDC60-205ENST00000546345 OR6J1Q8NGC5 347 aa7.8□□□□□ -1.16
CCDC60-205ENST00000546345 STK35Q8TDR2 534 aa7.8□□□□□ -1.16
CCDC60-205ENST00000546345 KAT2BQ92831 832 aa7.8□□□□□ -1.16
CCDC60-205ENST00000546345 EAF2Q96CJ1 260 aaPredicted RBP7.8□□□□□ -1.16
CCDC60-205ENST00000546345 CRBNQ96SW2 442 aa7.8□□□□□ -1.16
CCDC60-205ENST00000546345 MAP7D2Q96T17 732 aa7.8□□□□□ -1.16
CCDC60-205ENST00000546345 WDR11Q9BZH6 1224 aa7.8□□□□□ -1.16
CCDC60-205ENST00000546345 ARMT1Q9H993 441 aa7.8□□□□□ -1.16
CCDC60-205ENST00000546345 RC3H2Q9HBD1 1191 aaKnown RBP7.8□□□□□ -1.16
CCDC60-205ENST00000546345 INCENPQ9NQS7 918 aa7.8□□□□□ -1.16
CCDC60-205ENST00000546345 KRT82Q9NSB4 513 aa7.8□□□□□ -1.16
CCDC60-205ENST00000546345 RALYQ9UKM9 306 aaKnown RBP7.8□□□□□ -1.16
CCDC60-205ENST00000546345 USP15Q9Y4E8 981 aaPredicted RBP7.8□□□□□ -1.16
CCDC60-205ENST00000546345 ZFYVE26Q68DK2 2539 aa7.79□□□□□ -1.16
CCDC60-205ENST00000546345 DOCK8Q8NF50 2099 aa7.79□□□□□ -1.16
CCDC60-205ENST00000546345 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.79□□□□□ -1.16
CCDC60-205ENST00000546345 EFCAB14O75071 495 aa7.79□□□□□ -1.16
CCDC60-205ENST00000546345 ZBED4O75132 1171 aa7.79□□□□□ -1.16
CCDC60-205ENST00000546345 PAGE1O75459 146 aa7.79□□□□□ -1.16
CCDC60-205ENST00000546345 CSPG5O95196 566 aa7.79□□□□□ -1.16
CCDC60-205ENST00000546345 ARIH2O95376 493 aa7.79□□□□□ -1.16
CCDC60-205ENST00000546345 CELA3AP09093 270 aa7.79□□□□□ -1.16
CCDC60-205ENST00000546345 LIG1P18858 919 aa7.79□□□□□ -1.16
CCDC60-205ENST00000546345 ST13P50502 369 aaKnown RBP7.79□□□□□ -1.16
CCDC60-205ENST00000546345 ALDH5A1P51649 535 aaPredicted RBP7.79□□□□□ -1.16
CCDC60-205ENST00000546345 COASYQ13057 564 aa7.79□□□□□ -1.16
CCDC60-205ENST00000546345 G3BP1Q13283 466 aaKnown RBP eCLIP7.79□□□□□ -1.16
CCDC60-205ENST00000546345 ADAM15Q13444 863 aa7.79□□□□□ -1.16
CCDC60-205ENST00000546345 LRRC14Q15048 493 aa7.79□□□□□ -1.16
CCDC60-205ENST00000546345 ZNF618Q5T7W0 954 aa7.79□□□□□ -1.16
CCDC60-205ENST00000546345 TMED8Q6PL24 325 aaPredicted RBP7.79□□□□□ -1.16
CCDC60-205ENST00000546345 PDZD3Q86UT5 571 aa7.79□□□□□ -1.16
CCDC60-205ENST00000546345 FAM46AQ96IP4 442 aaKnown RBP7.79□□□□□ -1.16
CCDC60-205ENST00000546345 CCDC8Q9H0W5 538 aaPredicted RBP7.79□□□□□ -1.16
CCDC60-205ENST00000546345 SMOC2Q9H3U7 446 aa7.79□□□□□ -1.16
CCDC60-205ENST00000546345 CCDC86Q9H6F5 360 aaKnown RBP7.79□□□□□ -1.16
CCDC60-205ENST00000546345 NYAP2Q9P242 653 aa7.79□□□□□ -1.16
CCDC60-205ENST00000546345 GTF2IRD1Q9UHL9 959 aa7.79□□□□□ -1.16
CCDC60-205ENST00000546345 NOB1Q9ULX3 412 aaKnown RBP7.79□□□□□ -1.16
CCDC60-205ENST00000546345 TNNQ9UQP3 1299 aa7.79□□□□□ -1.16
CCDC60-205ENST00000546345 PLIN4Q96Q06 1357 aa7.79□□□□□ -1.16
CCDC60-205ENST00000546345 E9PSI1 815 aa7.78□□□□□ -1.16
CCDC60-205ENST00000546345 NCK2O43639 380 aa7.78□□□□□ -1.16
CCDC60-205ENST00000546345 MBD4O95243 580 aa7.78□□□□□ -1.16
CCDC60-205ENST00000546345 PARNO95453 639 aaKnown RBP7.78□□□□□ -1.16
CCDC60-205ENST00000546345 MMP1P03956 469 aa7.78□□□□□ -1.16
CCDC60-205ENST00000546345 SLFN14P0C7P3 912 aa7.78□□□□□ -1.16
CCDC60-205ENST00000546345 DNAJB1P25685 340 aa7.78□□□□□ -1.16
CCDC60-205ENST00000546345 CTNNB1P35222 781 aa7.78□□□□□ -1.16
CCDC60-205ENST00000546345 PREPP48147 710 aa7.78□□□□□ -1.16
CCDC60-205ENST00000546345 NDUFV1P49821 464 aa7.78□□□□□ -1.16
CCDC60-205ENST00000546345 RBM10P98175 930 aaKnown RBP7.78□□□□□ -1.16
CCDC60-205ENST00000546345 SOX4Q06945 474 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms