RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 CALML4Q96GE6 196 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 SIKE1Q9BRV8 207 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 FAM129AQ9BZQ8 928 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 UBA5Q9GZZ9 404 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 CCDC113Q9H0I3 377 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 RAB17Q9H0T7 212 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 LRRC4CQ9HCJ2 640 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 STK17AQ9UEE5 414 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 RBAK-RBAKDNI3L0D1 243 aa8.46□□□□□ -1.05
UBR1-202ENST00000546274 TLR2O60603 784 aa8.46□□□□□ -1.05
UBR1-202ENST00000546274 ATP9AO75110 1047 aa8.46□□□□□ -1.05
UBR1-202ENST00000546274 RPS6KA4O75676 772 aa8.46□□□□□ -1.05
UBR1-202ENST00000546274 NOL4O94818 638 aa8.46□□□□□ -1.05
UBR1-202ENST00000546274 LDHAP00338 332 aaKnown RBP8.46□□□□□ -1.05
UBR1-202ENST00000546274 HOXD12P35452 270 aa8.46□□□□□ -1.05
UBR1-202ENST00000546274 RHBDL3P58872 404 aa8.46□□□□□ -1.05
UBR1-202ENST00000546274 GSTO1P78417 241 aa8.46□□□□□ -1.05
UBR1-202ENST00000546274 BIRC3Q13489 604 aa8.46□□□□□ -1.05
UBR1-202ENST00000546274 ITIH4Q14624 930 aa8.46□□□□□ -1.05
UBR1-202ENST00000546274 CCDC6Q16204 474 aa8.46□□□□□ -1.05
UBR1-202ENST00000546274 CALCRLQ16602 461 aa8.46□□□□□ -1.05
UBR1-202ENST00000546274 ERMARDQ5T6L9 678 aa8.46□□□□□ -1.05
UBR1-202ENST00000546274 KLHDC7AQ5VTJ3 777 aa8.46□□□□□ -1.05
UBR1-202ENST00000546274 DUS1LQ6P1R4 473 aaKnown RBP8.46□□□□□ -1.05
UBR1-202ENST00000546274 PDXDC1Q6P996 788 aa8.46□□□□□ -1.05
UBR1-202ENST00000546274 TPTE2Q6XPS3 522 aa8.46□□□□□ -1.05
UBR1-202ENST00000546274 RRAGAQ7L523 313 aa8.46□□□□□ -1.05
UBR1-202ENST00000546274 MAP7D3Q8IWC1 876 aa8.46□□□□□ -1.05
UBR1-202ENST00000546274 RUBCNQ92622 972 aa8.46□□□□□ -1.05
UBR1-202ENST00000546274 CLIP3Q96DZ5 547 aa8.46□□□□□ -1.05
UBR1-202ENST00000546274 AGAP3Q96P47 875 aa8.46□□□□□ -1.05
UBR1-202ENST00000546274 PRMT1Q99873 361 aaKnown RBP8.46□□□□□ -1.05
UBR1-202ENST00000546274 FGFBP2Q9BYJ0 223 aa8.46□□□□□ -1.05
UBR1-202ENST00000546274 VAT1LQ9HCJ6 419 aa8.46□□□□□ -1.05
UBR1-202ENST00000546274 R3HDM2Q9Y2K5 976 aaKnown RBP8.46□□□□□ -1.05
UBR1-202ENST00000546274 SH3GLB1Q9Y371 365 aa8.46□□□□□ -1.05
UBR1-202ENST00000546274 BOLA2-SMG1P6H3BVE0 249 aa8.46□□□□□ -1.06
UBR1-202ENST00000546274 GSTA2P09210 222 aa8.46□□□□□ -1.06
UBR1-202ENST00000546274 PYGMP11217 842 aa8.46□□□□□ -1.06
UBR1-202ENST00000546274 SLC1A4P43007 532 aa8.46□□□□□ -1.06
UBR1-202ENST00000546274 OXCT1P55809 520 aa8.46□□□□□ -1.06
UBR1-202ENST00000546274 LRRC63Q05C16 580 aa8.46□□□□□ -1.06
UBR1-202ENST00000546274 LRRC41Q15345 812 aa8.46□□□□□ -1.06
UBR1-202ENST00000546274 KIAA0753Q2KHM9 967 aa8.46□□□□□ -1.06
UBR1-202ENST00000546274 IRGCQ6NXR0 463 aa8.46□□□□□ -1.06
UBR1-202ENST00000546274 FAM133AQ8N9E0 248 aa8.46□□□□□ -1.06
UBR1-202ENST00000546274 FLAD1Q8NFF5 587 aa8.46□□□□□ -1.06
UBR1-202ENST00000546274 PTPRN2Q92932 1015 aa8.46□□□□□ -1.06
UBR1-202ENST00000546274 ZNF653Q96CK0 615 aa8.46□□□□□ -1.06
UBR1-202ENST00000546274 DNAJC19Q96DA6 116 aa8.46□□□□□ -1.06
UBR1-202ENST00000546274 DYDC2Q96IM9 177 aa8.46□□□□□ -1.06
UBR1-202ENST00000546274 DNAJC1Q96KC8 554 aaKnown RBP8.46□□□□□ -1.06
UBR1-202ENST00000546274 MMRN2Q9H8L6 949 aa8.46□□□□□ -1.06
UBR1-202ENST00000546274 PFDN4Q9NQP4 134 aa8.46□□□□□ -1.06
UBR1-202ENST00000546274 GDF3Q9NR23 364 aa8.46□□□□□ -1.06
UBR1-202ENST00000546274 METTL5Q9NRN9 209 aaKnown RBP8.46□□□□□ -1.06
UBR1-202ENST00000546274 CCNL1Q9UK58 526 aaPredicted RBP8.46□□□□□ -1.06
UBR1-202ENST00000546274 HYOU1Q9Y4L1 999 aa8.46□□□□□ -1.06
UBR1-202ENST00000546274 PLIN4Q96Q06 1357 aa8.46□□□□□ -1.06
UBR1-202ENST00000546274 MAGEA13PA6NCF6 341 aa8.46□□□□□ -1.06
UBR1-202ENST00000546274 NVLO15381 856 aaKnown RBP8.46□□□□□ -1.06
UBR1-202ENST00000546274 KRT38O76015 456 aa8.46□□□□□ -1.06
UBR1-202ENST00000546274 CCDC166P0CW27 439 aa8.46□□□□□ -1.06
UBR1-202ENST00000546274 TPBGLP0DKB5 382 aa8.46□□□□□ -1.06
UBR1-202ENST00000546274 UAP1Q16222 522 aaPredicted RBP8.46□□□□□ -1.06
UBR1-202ENST00000546274 SH2D4BQ5SQS7 431 aa8.46□□□□□ -1.06
UBR1-202ENST00000546274 RC3H1Q5TC82 1133 aaKnown RBP8.46□□□□□ -1.06
UBR1-202ENST00000546274 C15orf52Q6ZUT6 534 aaKnown RBP8.46□□□□□ -1.06
UBR1-202ENST00000546274 CCDC84Q86UT8 332 aaPredicted RBP8.46□□□□□ -1.06
UBR1-202ENST00000546274 CYP4X1Q8N118 509 aa8.46□□□□□ -1.06
UBR1-202ENST00000546274 STK32AQ8WU08 396 aa8.46□□□□□ -1.06
UBR1-202ENST00000546274 DDX12PQ92771 950 aa8.46□□□□□ -1.06
UBR1-202ENST00000546274 COA7Q96BR5 231 aa8.46□□□□□ -1.06
UBR1-202ENST00000546274 ABHD8Q96I13 439 aa8.46□□□□□ -1.06
UBR1-202ENST00000546274 ANKRD27Q96NW4 1050 aa8.46□□□□□ -1.06
UBR1-202ENST00000546274 ZNF317Q96PQ6 595 aaPredicted RBP8.46□□□□□ -1.06
UBR1-202ENST00000546274 SRPK1Q96SB4 655 aaKnown RBP8.46□□□□□ -1.06
UBR1-202ENST00000546274 PLCB1Q9NQ66 1216 aa8.46□□□□□ -1.06
UBR1-202ENST00000546274 ARHGEF3Q9NR81 526 aa8.46□□□□□ -1.06
UBR1-202ENST00000546274 SEC63Q9UGP8 760 aaKnown RBP8.46□□□□□ -1.06
UBR1-202ENST00000546274 FBXL5Q9UKA1 691 aa8.46□□□□□ -1.06
UBR1-202ENST00000546274 TDRKHQ9Y2W6 561 aaKnown RBP8.46□□□□□ -1.06
UBR1-202ENST00000546274 GMEB1Q9Y692 573 aa8.46□□□□□ -1.06
UBR1-202ENST00000546274 LRRC37AA6NMS7 1700 aa8.45□□□□□ -1.06
UBR1-202ENST00000546274 FRMPD2Q68DX3 1309 aaPredicted RBP8.45□□□□□ -1.06
UBR1-202ENST00000546274 TMEM110-MUSTN1A8MSY1 372 aa8.45□□□□□ -1.06
UBR1-202ENST00000546274 IPO5O00410 1097 aaKnown RBP8.45□□□□□ -1.06
UBR1-202ENST00000546274 PPP1R11O60927 126 aaPredicted RBP8.45□□□□□ -1.06
UBR1-202ENST00000546274 ACADSP16219 412 aa8.45□□□□□ -1.06
UBR1-202ENST00000546274 TCP1P17987 556 aaKnown RBP8.45□□□□□ -1.06
UBR1-202ENST00000546274 NFKBIAP25963 317 aa8.45□□□□□ -1.06
UBR1-202ENST00000546274 TNFRSF8P28908 595 aa8.45□□□□□ -1.06
UBR1-202ENST00000546274 HOXD11P31277 338 aaPredicted RBP8.45□□□□□ -1.06
UBR1-202ENST00000546274 CLK2P49760 499 aaKnown RBP8.45□□□□□ -1.06
UBR1-202ENST00000546274 PDE6CP51160 858 aa8.45□□□□□ -1.06
UBR1-202ENST00000546274 GRAPQ13588 217 aa8.45□□□□□ -1.06
UBR1-202ENST00000546274 SLC15A2Q16348 729 aa8.45□□□□□ -1.06
UBR1-202ENST00000546274 FOXR2Q6PJQ5 311 aa8.45□□□□□ -1.06
UBR1-202ENST00000546274 SCUBE1Q8IWY4 988 aa8.45□□□□□ -1.06
UBR1-202ENST00000546274 PROM2Q8N271 834 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms