RNA–Protein interactions for RNA: ENST00000545831.5

NPIPA1-208, Transcript of nuclear pore complex interacting protein family member A1, human

TSL 3

Gene NPIPA1, Length 553 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPA1-208	ENST00000545831	TMEM132A	Q24JP5	1023 aa		11	□□□□□ -0.65
NPIPA1-208	ENST00000545831	CCDC40	Q4G0X9	1142 aa		11	□□□□□ -0.65
NPIPA1-208	ENST00000545831	FILIP1L	Q4L180	1135 aa		11	□□□□□ -0.65
NPIPA1-208	ENST00000545831	HSP90AA4P	Q58FG1	418 aa		11	□□□□□ -0.65
NPIPA1-208	ENST00000545831	CDKAL1	Q5VV42	579 aa		11	□□□□□ -0.65
NPIPA1-208	ENST00000545831	GDF6	Q6KF10	455 aa	Predicted RBP	11	□□□□□ -0.65
NPIPA1-208	ENST00000545831	RUFY4	Q6ZNE9	571 aa		11	□□□□□ -0.65
NPIPA1-208	ENST00000545831	SLC9A9	Q8IVB4	645 aa		11	□□□□□ -0.65
NPIPA1-208	ENST00000545831	C12orf56	Q8IXR9	622 aa		11	□□□□□ -0.65
NPIPA1-208	ENST00000545831	ZNF668	Q96K58	619 aa	Predicted RBP	11	□□□□□ -0.65
NPIPA1-208	ENST00000545831	CTAGE1	Q96RT6	745 aa		11	□□□□□ -0.65
NPIPA1-208	ENST00000545831	PPP1R16B	Q96T49	567 aa		11	□□□□□ -0.65
NPIPA1-208	ENST00000545831	MRPL4	Q9BYD3	311 aa	Known RBP	11	□□□□□ -0.65
NPIPA1-208	ENST00000545831	TRIM5	Q9C035	493 aa		11	□□□□□ -0.65
NPIPA1-208	ENST00000545831	PRDM10	Q9NQV6	1147 aa		11	□□□□□ -0.65
NPIPA1-208	ENST00000545831	PRMT7	Q9NVM4	692 aa	Predicted RBP	11	□□□□□ -0.65
NPIPA1-208	ENST00000545831	FRMD4B	Q9Y2L6	1034 aa		11	□□□□□ -0.65
NPIPA1-208	ENST00000545831	ARVCF	O00192	962 aa		10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	HNRNPDL	O14979	420 aa	Known RBP	10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	KIAA0391	O15091	583 aa	Known RBP	10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	EXOC3	O60645	756 aa		10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	ERLIN2	O94905	339 aa		10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	PIGR	P01833	764 aa		10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	TPM3	P06753	285 aa		10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	EPB41	P11171	864 aa	Known RBP	10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	GART	P22102	1010 aa		10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	MATR3	P43243	847 aa	Known RBP eCLIP	10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	MTIF2	P46199	727 aa	Known RBP	10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	UBASH3A	P57075	661 aa		10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	NCBP1	Q09161	790 aa	Known RBP	10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	PTK7	Q13308	1070 aa		10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	PRPF4B	Q13523	1007 aa	Known RBP	10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	FAM187B	Q17R55	369 aa		10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	KIZ	Q2M2Z5	673 aa		10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	TCP11X2	Q5H9J9	407 aa		10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	CEP135	Q66GS9	1140 aa		10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	SARM1	Q6SZW1	724 aa		10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	ZPBP2	Q6X784	338 aa		10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	LRRC55	Q6ZSA7	311 aa		10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	TAS1R3	Q7RTX0	852 aa		10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	RPAIN	Q86UA6	219 aa		10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	SERINC5	Q86VE9	423 aa		10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	ZC3H3	Q8IXZ2	948 aa	Known RBP	10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	U2AF1L4	Q8WU68	220 aa	Known RBP	10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	POMGNT1	Q8WZA1	660 aa		10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	PRIMPOL	Q96LW4	560 aa		10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	TMEM106C	Q9BVX2	250 aa		10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	CCDC113	Q9H0I3	377 aa		10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	HSD3B7	Q9H2F3	369 aa		10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	ADAMTS10	Q9H324	1103 aa		10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	FZD8	Q9H461	694 aa		10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	IFT122	Q9HBG6	1241 aa		10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	METTL14	Q9HCE5	456 aa	Known RBP	10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	LIMA1	Q9UHB6	759 aa	Known RBP	10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	GINS2	Q9Y248	185 aa		10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	GRIN2D	O15399	1336 aa		10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	ZMYM2	Q9UBW7	1377 aa		10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	SCN10A	Q9Y5Y9	1956 aa		10.99	□□□□□ -0.65
NPIPA1-208	ENST00000545831	ANKRD63	C9JTQ0	380 aa		10.98	□□□□□ -0.65
NPIPA1-208	ENST00000545831	ACKR2	O00590	384 aa		10.98	□□□□□ -0.65
NPIPA1-208	ENST00000545831	SLC16A3	O15427	465 aa	Known RBP	10.98	□□□□□ -0.65
NPIPA1-208	ENST00000545831	GPR32	O75388	356 aa		10.98	□□□□□ -0.65
NPIPA1-208	ENST00000545831	LDHA	P00338	332 aa	Known RBP	10.98	□□□□□ -0.65
NPIPA1-208	ENST00000545831	ATP1A3	P13637	1013 aa		10.98	□□□□□ -0.65
NPIPA1-208	ENST00000545831	PSMC2	P35998	433 aa	Known RBP	10.98	□□□□□ -0.65
NPIPA1-208	ENST00000545831	CYP2J2	P51589	502 aa		10.98	□□□□□ -0.65
NPIPA1-208	ENST00000545831	CRYBB1	P53674	252 aa	Predicted RBP	10.98	□□□□□ -0.65
NPIPA1-208	ENST00000545831	MRPS6	P82932	125 aa	Known RBP	10.98	□□□□□ -0.65
NPIPA1-208	ENST00000545831	MBTD1	Q05BQ5	628 aa		10.98	□□□□□ -0.65
NPIPA1-208	ENST00000545831	TMEM62	Q0P6H9	643 aa		10.98	□□□□□ -0.65
NPIPA1-208	ENST00000545831	PCBP1	Q15365	356 aa	Known RBP eCLIP	10.98	□□□□□ -0.65
NPIPA1-208	ENST00000545831	SLC43A3	Q8NBI5	491 aa		10.98	□□□□□ -0.65
NPIPA1-208	ENST00000545831	XXYLT1	Q8NBI6	393 aa		10.98	□□□□□ -0.65
NPIPA1-208	ENST00000545831	TMEM174	Q8WUU8	243 aa		10.98	□□□□□ -0.65
NPIPA1-208	ENST00000545831	EEF2KMT	Q96G04	330 aa		10.98	□□□□□ -0.65
NPIPA1-208	ENST00000545831	CNOT6L	Q96LI5	555 aa	Known RBP	10.98	□□□□□ -0.65
NPIPA1-208	ENST00000545831	TCHP	Q9BT92	498 aa		10.98	□□□□□ -0.65
NPIPA1-208	ENST00000545831	MKNK1	Q9BUB5	465 aa		10.98	□□□□□ -0.65
NPIPA1-208	ENST00000545831	TARS2	Q9BW92	718 aa	Known RBP	10.98	□□□□□ -0.65
NPIPA1-208	ENST00000545831	CELF4	Q9BZC1	486 aa	Known RBP	10.98	□□□□□ -0.65
NPIPA1-208	ENST00000545831	CRISPLD2	Q9H0B8	497 aa		10.98	□□□□□ -0.65
NPIPA1-208	ENST00000545831	KIAA1586	Q9HCI6	787 aa		10.98	□□□□□ -0.65
NPIPA1-208	ENST00000545831	DMAC2	Q9NW81	257 aa		10.98	□□□□□ -0.65
NPIPA1-208	ENST00000545831	IFNK	Q9P0W0	207 aa		10.98	□□□□□ -0.65
NPIPA1-208	ENST00000545831	TRPV2	Q9Y5S1	764 aa		10.98	□□□□□ -0.65
NPIPA1-208	ENST00000545831	EVPL	Q92817	2033 aa		10.97	□□□□□ -0.65
NPIPA1-208	ENST00000545831	LRRC10B	A6NIK2	292 aa		10.97	□□□□□ -0.65
NPIPA1-208	ENST00000545831	TLR3	O15455	904 aa	Known RBP	10.97	□□□□□ -0.65
NPIPA1-208	ENST00000545831	CAND2	O75155	1236 aa		10.97	□□□□□ -0.65
NPIPA1-208	ENST00000545831	TOM1L1	O75674	476 aa		10.97	□□□□□ -0.65
NPIPA1-208	ENST00000545831	ADCY5	O95622	1261 aa		10.97	□□□□□ -0.65
NPIPA1-208	ENST00000545831	PRKCSH	P14314	528 aa	Predicted RBP	10.97	□□□□□ -0.65
NPIPA1-208	ENST00000545831	DARS	P14868	501 aa	Known RBP	10.97	□□□□□ -0.65
NPIPA1-208	ENST00000545831	EIF4B	P23588	611 aa	Known RBP	10.97	□□□□□ -0.65
NPIPA1-208	ENST00000545831	GJA8	P48165	433 aa		10.97	□□□□□ -0.65
NPIPA1-208	ENST00000545831	PPP2R3A	Q06190	1150 aa		10.97	□□□□□ -0.65
NPIPA1-208	ENST00000545831	KRT31	Q15323	416 aa		10.97	□□□□□ -0.65
NPIPA1-208	ENST00000545831	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	10.97	□□□□□ -0.65
NPIPA1-208	ENST00000545831	FRMD5	Q7Z6J6	570 aa		10.97	□□□□□ -0.65
NPIPA1-208	ENST00000545831	IRF2BP1	Q8IU81	584 aa		10.97	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms