RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 MALT1Q9UDY8 824 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 SCOCQ9UIL1 159 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 CDV3Q9UKY7 258 aaKnown RBP5.51□□□□□ -1.53
UBE4A-203ENST00000545354 APOBEC2Q9Y235 224 aaKnown RBP5.51□□□□□ -1.53
UBE4A-203ENST00000545354 ZCCHC11Q5TAX3 1644 aaKnown RBP5.5□□□□□ -1.53
UBE4A-203ENST00000545354 WDR7Q9Y4E6 1490 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 CARMIL2Q6F5E8 1435 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 KANSL1LA0AUZ9 987 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 SPDYE5A6NIY4 337 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 TMEM114B3SHH9 223 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 CACNB4O00305 520 aaPredicted RBP5.5□□□□□ -1.53
UBE4A-203ENST00000545354 IGF2BP3O00425 579 aaKnown RBP eCLIP5.5□□□□□ -1.53
UBE4A-203ENST00000545354 CDK2AP1O14519 115 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 SLC7A4O43246 635 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 USP1O94782 785 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 ANP32DO95626 131 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 POP4O95707 220 aaKnown RBP5.5□□□□□ -1.53
UBE4A-203ENST00000545354 DDX58O95786 925 aaKnown RBP5.5□□□□□ -1.53
UBE4A-203ENST00000545354 RPS17P08708 135 aaKnown RBP5.5□□□□□ -1.53
UBE4A-203ENST00000545354 GHRP10912 638 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 HPGDP15428 266 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 PDGFRAP16234 1089 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 NAGAP17050 411 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 POLR2CP19387 275 aaPredicted RBP5.5□□□□□ -1.53
UBE4A-203ENST00000545354 TNFAIP3P21580 790 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 PHBP35232 272 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 SOX6P35712 828 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 HSPA9P38646 679 aaKnown RBP5.5□□□□□ -1.53
UBE4A-203ENST00000545354 ADCY8P40145 1251 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 SULT1E1P49888 294 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 ARHGDIBP52566 201 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 AP3M2P53677 418 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 FRG1Q14331 258 aaKnown RBP5.5□□□□□ -1.53
UBE4A-203ENST00000545354 NFE2Q16621 373 aaPredicted RBP5.5□□□□□ -1.53
UBE4A-203ENST00000545354 IFI16Q16666 785 aaKnown RBP5.5□□□□□ -1.53
UBE4A-203ENST00000545354 CDONQ4KMG0 1287 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 VWA3BQ502W6 1294 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 KCNT1Q5JUK3 1230 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 TCERG1LQ5VWI1 586 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 DENND2CQ68D51 928 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 IQSEC1Q6DN90 963 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 SLC4A10Q6U841 1118 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 C6orf89Q6UWU4 347 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 C14orf80Q86SX3 495 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 P3H2Q8IVL5 708 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 TAB3Q8N5C8 712 aaPredicted RBP5.5□□□□□ -1.53
UBE4A-203ENST00000545354 KCT2Q8NC54 265 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 OR6P1Q8NGX9 317 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 CALML6Q8TD86 181 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 STARD8Q92502 1023 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 ZC3H10Q96K80 434 aaKnown RBP5.5□□□□□ -1.53
UBE4A-203ENST00000545354 ZFRQ96KR1 1074 aaKnown RBP5.5□□□□□ -1.53
UBE4A-203ENST00000545354 TSNARE1Q96NA8 513 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 OLFM3Q96PB7 478 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 CCDC106Q9BWC9 280 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 UNKQ9C0B0 810 aaKnown RBP5.5□□□□□ -1.53
UBE4A-203ENST00000545354 NT5C3AQ9H0P0 336 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 CARD9Q9H257 536 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 KCNF1Q9H3M0 494 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 PDE11AQ9HCR9 933 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 DIABLOQ9NR28 239 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 RASSF1Q9NS23 344 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 TAS2R7Q9NYW3 318 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.5□□□□□ -1.53
UBE4A-203ENST00000545354 SEPT9Q9UHD8 586 aaPredicted RBP5.5□□□□□ -1.53
UBE4A-203ENST00000545354 AGAP1Q9UPQ3 857 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 EIF3HO15372 352 aaKnown RBP eCLIP5.5□□□□□ -1.53
UBE4A-203ENST00000545354 HDAC3O15379 428 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 ST8SIA5O15466 376 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 TGDSO95455 350 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 MYCP01106 439 aaPredicted RBP5.5□□□□□ -1.53
UBE4A-203ENST00000545354 RETP07949 1114 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 DNAJB2P25686 324 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 TARSP26639 723 aaKnown RBP5.5□□□□□ -1.53
UBE4A-203ENST00000545354 PBLDP30039 288 aaPredicted RBP5.5□□□□□ -1.53
UBE4A-203ENST00000545354 DNAJA1P31689 397 aaKnown RBP5.5□□□□□ -1.53
UBE4A-203ENST00000545354 STAT6P42226 847 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 ATP5OP48047 213 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 USP46P62068 366 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 PPP2R2AP63151 447 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 TAGLNQ01995 201 aaKnown RBP5.5□□□□□ -1.53
UBE4A-203ENST00000545354 CDK18Q07002 472 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 TBX2Q13207 712 aaPredicted RBP5.5□□□□□ -1.53
UBE4A-203ENST00000545354 SSPNQ14714 243 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 NAA30Q147X3 362 aaPredicted RBP5.5□□□□□ -1.53
UBE4A-203ENST00000545354 FAM98CQ17RN3 349 aaKnown RBP5.5□□□□□ -1.53
UBE4A-203ENST00000545354 PLEKHG4Q58EX7 1191 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 AARS2Q5JTZ9 985 aaKnown RBP5.5□□□□□ -1.53
UBE4A-203ENST00000545354 C20orf194Q5TEA3 1177 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 DAB2IPQ5VWQ8 1189 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 PPP1R18Q6NYC8 613 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 B3GNT6Q6ZMB0 384 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 FAM83AQ86UY5 434 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 KCNH5Q8NCM2 988 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 OR8K3Q8NH51 312 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 RASSF5Q8WWW0 418 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 NLRP7Q8WX94 980 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 SEPT1Q8WYJ6 367 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 PTPRN2Q92932 1015 aa5.5□□□□□ -1.53
UBE4A-203ENST00000545354 KIFC2Q96AC6 838 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms