RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 PPP1R13LQ8WUF5 828 aa15.08■□□□□ 0
SCARB1-209ENST00000545305 VTI1AQ96AJ9 217 aa15.08■□□□□ 0
SCARB1-209ENST00000545305 MKNK1Q9BUB5 465 aa15.08■□□□□ 0
SCARB1-209ENST00000545305 NOC4LQ9BVI4 516 aaKnown RBP15.08■□□□□ 0
SCARB1-209ENST00000545305 MRPL4Q9BYD3 311 aaKnown RBP15.08■□□□□ 0
SCARB1-209ENST00000545305 INO80BQ9C086 356 aaPredicted RBP15.08■□□□□ 0
SCARB1-209ENST00000545305 CCDC113Q9H0I3 377 aa15.08■□□□□ 0
SCARB1-209ENST00000545305 UNC93B1Q9H1C4 597 aa15.08■□□□□ 0
SCARB1-209ENST00000545305 VPS16Q9H269 839 aa15.08■□□□□ 0
SCARB1-209ENST00000545305 IKZF4Q9H2S9 585 aa15.08■□□□□ 0
SCARB1-209ENST00000545305 GTF2IRD1Q9UHL9 959 aa15.08■□□□□ 0
SCARB1-209ENST00000545305 LRRC10BA6NIK2 292 aa15.07■□□□□ 0
SCARB1-209ENST00000545305 LGALS16A8MUM7 142 aa15.07■□□□□ 0
SCARB1-209ENST00000545305 RPLP2P05387 115 aaKnown RBP15.07■□□□□ 0
SCARB1-209ENST00000545305 GARTP22102 1010 aa15.07■□□□□ 0
SCARB1-209ENST00000545305 HOXC8P31273 242 aa15.07■□□□□ 0
SCARB1-209ENST00000545305 PSMC2P35998 433 aaKnown RBP15.07■□□□□ 0
SCARB1-209ENST00000545305 MATR3P43243 847 aaKnown RBP eCLIP15.07■□□□□ 0
SCARB1-209ENST00000545305 GPC3P51654 580 aa15.07■□□□□ 0
SCARB1-209ENST00000545305 MARSP56192 900 aaKnown RBP15.07■□□□□ 0
SCARB1-209ENST00000545305 ADAM17P78536 824 aa15.07■□□□□ 0
SCARB1-209ENST00000545305 PPP2R3AQ06190 1150 aa15.07■□□□□ 0
SCARB1-209ENST00000545305 FKBP15Q5T1M5 1219 aa15.07■□□□□ 0
SCARB1-209ENST00000545305 LHX8Q68G74 356 aa15.07■□□□□ 0
SCARB1-209ENST00000545305 SLFN12LQ6IEE8 588 aa15.07■□□□□ 0
SCARB1-209ENST00000545305 TAF2Q6P1X5 1199 aa15.07■□□□□ 0
SCARB1-209ENST00000545305 RUFY4Q6ZNE9 571 aa15.07■□□□□ 0
SCARB1-209ENST00000545305 FRMD5Q7Z6J6 570 aa15.07■□□□□ 0
SCARB1-209ENST00000545305 SESTD1Q86VW0 696 aa15.07■□□□□ 0
SCARB1-209ENST00000545305 IFNLR1Q8IU57 520 aaPredicted RBP15.07■□□□□ 0
SCARB1-209ENST00000545305 FAM186BQ8IYM0 893 aa15.07■□□□□ 0
SCARB1-209ENST00000545305 ZNF710Q8N1W2 664 aa15.07■□□□□ 0
SCARB1-209ENST00000545305 POMGNT1Q8WZA1 660 aa15.07■□□□□ 0
SCARB1-209ENST00000545305 ZNF668Q96K58 619 aaPredicted RBP15.07■□□□□ 0
SCARB1-209ENST00000545305 GLT1D1Q96MS3 346 aa15.07■□□□□ 0
SCARB1-209ENST00000545305 NAP1L5Q96NT1 182 aaPredicted RBP15.07■□□□□ 0
SCARB1-209ENST00000545305 PPP1R16BQ96T49 567 aa15.07■□□□□ 0
SCARB1-209ENST00000545305 RTN4Q9NQC3 1192 aaKnown RBP15.07■□□□□ 0
SCARB1-209ENST00000545305 PRMT7Q9NVM4 692 aaPredicted RBP15.07■□□□□ 0
SCARB1-209ENST00000545305 DMAC2Q9NW81 257 aa15.07■□□□□ 0
SCARB1-209ENST00000545305 HSPBP1Q9NZL4 362 aa15.07■□□□□ 0
SCARB1-209ENST00000545305 ARMCX3Q9UH62 379 aaPredicted RBP15.07■□□□□ 0
SCARB1-209ENST00000545305 A0A087WZ62 844 aa15.06■□□□□ 0
SCARB1-209ENST00000545305 ANKRD63C9JTQ0 380 aa15.06■□□□□ 0
SCARB1-209ENST00000545305 KIAA0391O15091 583 aaKnown RBP15.06■□□□□ 0
SCARB1-209ENST00000545305 TREHO43280 583 aa15.06■□□□□ 0
SCARB1-209ENST00000545305 AKAP3O75969 853 aa15.06■□□□□ 0
SCARB1-209ENST00000545305 CTCFP49711 727 aaPredicted RBP15.06■□□□□ 0
SCARB1-209ENST00000545305 NLRP11P59045 1033 aaKnown RBP15.06■□□□□ 0
SCARB1-209ENST00000545305 PTPN11Q06124 597 aaPredicted RBP15.06■□□□□ 0
SCARB1-209ENST00000545305 ZPBP2Q6X784 338 aa15.06■□□□□ 0
SCARB1-209ENST00000545305 SRGAP1Q7Z6B7 1085 aa15.06■□□□□ 0
SCARB1-209ENST00000545305 RSPH3Q86UC2 560 aa15.06■□□□□ 0
SCARB1-209ENST00000545305 NME8Q8N427 588 aa15.06■□□□□ 0
SCARB1-209ENST00000545305 XXYLT1Q8NBI6 393 aa15.06■□□□□ 0
SCARB1-209ENST00000545305 SPC24Q8NBT2 197 aa15.06■□□□□ 0
SCARB1-209ENST00000545305 TMEM174Q8WUU8 243 aa15.06■□□□□ 0
SCARB1-209ENST00000545305 FDXACB1Q9BRP7 624 aaPredicted RBP15.06■□□□□ 0
SCARB1-209ENST00000545305 CBWD1Q9BRT8 395 aa15.06■□□□□ 0
SCARB1-209ENST00000545305 GCOM2Q9BZD3 368 aaPredicted RBP15.06■□□□□ 0
SCARB1-209ENST00000545305 PCIF1Q9H4Z3 704 aa15.06■□□□□ 0
SCARB1-209ENST00000545305 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.06■□□□□ 0
SCARB1-209ENST00000545305 TISP43B9A030 160 aa15.05■□□□□ -0
SCARB1-209ENST00000545305 M0QZ92 97 aa15.05■□□□□ -0
SCARB1-209ENST00000545305 CCL5P13501 91 aa15.05■□□□□ -0
SCARB1-209ENST00000545305 KRT13P13646 458 aa15.05■□□□□ -0
SCARB1-209ENST00000545305 CASP4P49662 377 aa15.05■□□□□ -0
SCARB1-209ENST00000545305 ZNF200P98182 395 aaPredicted RBP15.05■□□□□ -0
SCARB1-209ENST00000545305 UBXN1Q04323 297 aa15.05■□□□□ -0
SCARB1-209ENST00000545305 MBTD1Q05BQ5 628 aa15.05■□□□□ -0
SCARB1-209ENST00000545305 PRPF4BQ13523 1007 aaKnown RBP15.05■□□□□ -0
SCARB1-209ENST00000545305 ITGA7Q13683 1181 aa15.05■□□□□ -0
SCARB1-209ENST00000545305 HIC1Q14526 733 aa15.05■□□□□ -0
SCARB1-209ENST00000545305 NR1I3Q14994 352 aa15.05■□□□□ -0
SCARB1-209ENST00000545305 VWA3BQ502W6 1294 aa15.05■□□□□ -0
SCARB1-209ENST00000545305 SLC39A4Q6P5W5 647 aa15.05■□□□□ -0
SCARB1-209ENST00000545305 FBXO46Q6PJ61 603 aaPredicted RBP15.05■□□□□ -0
SCARB1-209ENST00000545305 TMC6Q7Z403 805 aa15.05■□□□□ -0
SCARB1-209ENST00000545305 TRIM59Q8IWR1 403 aa15.05■□□□□ -0
SCARB1-209ENST00000545305 DNAJB3Q8WWF6 145 aa15.05■□□□□ -0
SCARB1-209ENST00000545305 TARS2Q9BW92 718 aaKnown RBP15.05■□□□□ -0
SCARB1-209ENST00000545305 RNF208Q9H0X6 261 aa15.05■□□□□ -0
SCARB1-209ENST00000545305 PAK6Q9NQU5 681 aaPredicted RBP15.05■□□□□ -0
SCARB1-209ENST00000545305 INTS13Q9NVM9 706 aa15.05■□□□□ -0
SCARB1-209ENST00000545305 ANKFY1Q9P2R3 1169 aa15.05■□□□□ -0
SCARB1-209ENST00000545305 ACKR2O00590 384 aa15.04■□□□□ -0
SCARB1-209ENST00000545305 MAPK13O15264 365 aa15.04■□□□□ -0
SCARB1-209ENST00000545305 ERLIN2O94905 339 aa15.04■□□□□ -0
SCARB1-209ENST00000545305 MYCP01106 439 aaPredicted RBP15.04■□□□□ -0
SCARB1-209ENST00000545305 HSPA1AP0DMV8 641 aaKnown RBP15.04■□□□□ -0
SCARB1-209ENST00000545305 HSPA1BP0DMV9 641 aaKnown RBP15.04■□□□□ -0
SCARB1-209ENST00000545305 PKN2Q16513 984 aaKnown RBP15.04■□□□□ -0
SCARB1-209ENST00000545305 FAM187BQ17R55 369 aa15.04■□□□□ -0
SCARB1-209ENST00000545305 KIZQ2M2Z5 673 aa15.04■□□□□ -0
SCARB1-209ENST00000545305 DCAF17Q5H9S7 520 aaPredicted RBP15.04■□□□□ -0
SCARB1-209ENST00000545305 TCERG1LQ5VWI1 586 aa15.04■□□□□ -0
SCARB1-209ENST00000545305 GDF6Q6KF10 455 aaPredicted RBP15.04■□□□□ -0
SCARB1-209ENST00000545305 VSTM4Q8IW00 320 aa15.04■□□□□ -0
SCARB1-209ENST00000545305 PRIMPOLQ96LW4 560 aa15.04■□□□□ -0
SCARB1-209ENST00000545305 MSTO1Q9BUK6 570 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms