RNA–Protein interactions for RNA: ENST00000544800.1

CIT-215, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-215ENST00000544800 ABCA2Q9BZC7 2435 aa7.97□□□□□ -1.13
CIT-215ENST00000544800 C1RP00736 705 aa7.97□□□□□ -1.13
CIT-215ENST00000544800 NR3C2P08235 984 aa7.97□□□□□ -1.13
CIT-215ENST00000544800 MAPK8P45983 427 aa7.97□□□□□ -1.13
CIT-215ENST00000544800 PXNP49023 591 aaPredicted RBP7.97□□□□□ -1.13
CIT-215ENST00000544800 SP2Q02086 613 aa7.97□□□□□ -1.13
CIT-215ENST00000544800 G3BP1Q13283 466 aaKnown RBP eCLIP7.97□□□□□ -1.13
CIT-215ENST00000544800 RALBP1Q15311 655 aa7.97□□□□□ -1.13
CIT-215ENST00000544800 DGKKQ5KSL6 1271 aa7.97□□□□□ -1.13
CIT-215ENST00000544800 AGMOQ6ZNB7 445 aa7.97□□□□□ -1.13
CIT-215ENST00000544800 TOGARAM2Q6ZUX3 1019 aa7.97□□□□□ -1.13
CIT-215ENST00000544800 HDDC3Q8N4P3 179 aa7.97□□□□□ -1.13
CIT-215ENST00000544800 NANOS1Q8WY41 292 aaKnown RBP7.97□□□□□ -1.13
CIT-215ENST00000544800 CHMP4CQ96CF2 233 aa7.97□□□□□ -1.13
CIT-215ENST00000544800 PSMG3-AS1Q96PY0 264 aa7.97□□□□□ -1.13
CIT-215ENST00000544800 DNAJC2Q99543 621 aaKnown RBP7.97□□□□□ -1.13
CIT-215ENST00000544800 NUSAP1Q9BXS6 441 aaKnown RBP7.97□□□□□ -1.13
CIT-215ENST00000544800 ANTXR1Q9H6X2 564 aa7.97□□□□□ -1.13
CIT-215ENST00000544800 TRPV5Q9NQA5 729 aa7.97□□□□□ -1.13
CIT-215ENST00000544800 MRPL17Q9NRX2 175 aaKnown RBP7.97□□□□□ -1.13
CIT-215ENST00000544800 RNF19AQ9NV58 838 aa7.97□□□□□ -1.13
CIT-215ENST00000544800 HEMK1Q9Y5R4 338 aaPredicted RBP7.97□□□□□ -1.13
CIT-215ENST00000544800 PIAS3Q9Y6X2 628 aa7.97□□□□□ -1.13
CIT-215ENST00000544800 FRMPD4Q14CM0 1322 aa7.97□□□□□ -1.13
CIT-215ENST00000544800 CCDC171Q6TFL3 1326 aa7.97□□□□□ -1.13
CIT-215ENST00000544800 KDM3AQ9Y4C1 1321 aa7.97□□□□□ -1.13
CIT-215ENST00000544800 SPTBN1Q01082 2364 aaKnown RBP7.96□□□□□ -1.13
CIT-215ENST00000544800 TERTO14746 1132 aaKnown RBP7.96□□□□□ -1.14
CIT-215ENST00000544800 SRGAP3O43295 1099 aa7.96□□□□□ -1.14
CIT-215ENST00000544800 RPS6KA5O75582 802 aa7.96□□□□□ -1.14
CIT-215ENST00000544800 MYBP10242 640 aa7.96□□□□□ -1.14
CIT-215ENST00000544800 PDE6AP16499 860 aa7.96□□□□□ -1.14
CIT-215ENST00000544800 UBA1P22314 1058 aaKnown RBP7.96□□□□□ -1.14
CIT-215ENST00000544800 PPFIA1Q13136 1202 aa7.96□□□□□ -1.14
CIT-215ENST00000544800 KARSQ15046 597 aaKnown RBP7.96□□□□□ -1.14
CIT-215ENST00000544800 MARCH8Q5T0T0 291 aa7.96□□□□□ -1.14
CIT-215ENST00000544800 ARHGEF16Q5VV41 709 aa7.96□□□□□ -1.14
CIT-215ENST00000544800 C1orf228Q6PIY5 440 aa7.96□□□□□ -1.14
CIT-215ENST00000544800 Q6ZS52 159 aa7.96□□□□□ -1.14
CIT-215ENST00000544800 TMEM173Q86WV6 379 aaPredicted RBP7.96□□□□□ -1.14
CIT-215ENST00000544800 WWC1Q8IX03 1113 aa7.96□□□□□ -1.14
CIT-215ENST00000544800 ZNF444Q8N0Y2 327 aaPredicted RBP7.96□□□□□ -1.14
CIT-215ENST00000544800 IRF7Q92985 503 aa7.96□□□□□ -1.14
CIT-215ENST00000544800 MED8Q96G25 268 aa7.96□□□□□ -1.14
CIT-215ENST00000544800 LARP6Q9BRS8 491 aaKnown RBP7.96□□□□□ -1.14
CIT-215ENST00000544800 MRPL9Q9BYD2 267 aaKnown RBP7.96□□□□□ -1.14
CIT-215ENST00000544800 PLA2G2FQ9BZM2 168 aa7.96□□□□□ -1.14
CIT-215ENST00000544800 FAM49AQ9H0Q0 323 aaPredicted RBP7.96□□□□□ -1.14
CIT-215ENST00000544800 BRD9Q9H8M2 597 aa7.96□□□□□ -1.14
CIT-215ENST00000544800 ARMT1Q9H993 441 aa7.96□□□□□ -1.14
CIT-215ENST00000544800 RBM12Q9NTZ6 932 aaKnown RBP7.96□□□□□ -1.14
CIT-215ENST00000544800 KIAA1522Q9P206 1035 aaPredicted RBP7.96□□□□□ -1.14
CIT-215ENST00000544800 SEPT3Q9UH03 358 aa7.96□□□□□ -1.14
CIT-215ENST00000544800 PCDHB9Q9Y5E1 797 aa7.96□□□□□ -1.14
CIT-215ENST00000544800 TSC2P49815 1807 aa7.96□□□□□ -1.14
CIT-215ENST00000544800 GREB1LQ9C091 1923 aaPredicted RBP7.95□□□□□ -1.14
CIT-215ENST00000544800 E9PAM4 449 aa7.95□□□□□ -1.14
CIT-215ENST00000544800 GPR182O15218 404 aa7.95□□□□□ -1.14
CIT-215ENST00000544800 SSBP05455 408 aaKnown RBP eCLIP7.95□□□□□ -1.14
CIT-215ENST00000544800 CCNE1P24864 410 aa7.95□□□□□ -1.14
CIT-215ENST00000544800 MLLT6P55198 1093 aaPredicted RBP7.95□□□□□ -1.14
CIT-215ENST00000544800 TMEM62Q0P6H9 643 aa7.95□□□□□ -1.14
CIT-215ENST00000544800 CAMK2BQ13554 666 aa7.95□□□□□ -1.14
CIT-215ENST00000544800 GRIK4Q16099 956 aa7.95□□□□□ -1.14
CIT-215ENST00000544800 PKDCCQ504Y2 493 aa7.95□□□□□ -1.14
CIT-215ENST00000544800 TNNI3KQ59H18 835 aa7.95□□□□□ -1.14
CIT-215ENST00000544800 SYDE2Q5VT97 1194 aa7.95□□□□□ -1.14
CIT-215ENST00000544800 BTNL9Q6UXG8 535 aa7.95□□□□□ -1.14
CIT-215ENST00000544800 CYP2U1Q7Z449 544 aa7.95□□□□□ -1.14
CIT-215ENST00000544800 GRASPQ7Z6J2 395 aaPredicted RBP7.95□□□□□ -1.14
CIT-215ENST00000544800 TRIM50Q86XT4 487 aa7.95□□□□□ -1.14
CIT-215ENST00000544800 SYNPOQ8N3V7 929 aa7.95□□□□□ -1.14
CIT-215ENST00000544800 NME8Q8N427 588 aa7.95□□□□□ -1.14
CIT-215ENST00000544800 SYTL5Q8TDW5 730 aaPredicted RBP7.95□□□□□ -1.14
CIT-215ENST00000544800 PI4K2AQ9BTU6 479 aa7.95□□□□□ -1.14
CIT-215ENST00000544800 ST3GAL5Q9UNP4 418 aa7.95□□□□□ -1.14
CIT-215ENST00000544800 SSX2IPQ9Y2D8 614 aa7.95□□□□□ -1.14
CIT-215ENST00000544800 FPGT-TNNI3KV9GXZ4 949 aa7.95□□□□□ -1.14
CIT-215ENST00000544800 ZNF532Q9HCE3 1301 aa7.95□□□□□ -1.14
CIT-215ENST00000544800 GOLGA4Q13439 2230 aaKnown RBP7.94□□□□□ -1.14
CIT-215ENST00000544800 TEX28O15482 410 aa7.94□□□□□ -1.14
CIT-215ENST00000544800 GAS2O43903 313 aaKnown RBP7.94□□□□□ -1.14
CIT-215ENST00000544800 EXTL3O43909 919 aa7.94□□□□□ -1.14
CIT-215ENST00000544800 B4GALT3O60512 393 aa7.94□□□□□ -1.14
CIT-215ENST00000544800 ZC3H11AO75152 810 aaKnown RBP eCLIP7.94□□□□□ -1.14
CIT-215ENST00000544800 AFPP02771 609 aaKnown RBP7.94□□□□□ -1.14
CIT-215ENST00000544800 SPATA31D3P0C874 917 aa7.94□□□□□ -1.14
CIT-215ENST00000544800 ENGP17813 658 aa7.94□□□□□ -1.14
CIT-215ENST00000544800 EIF2AK2P19525 551 aaKnown RBP7.94□□□□□ -1.14
CIT-215ENST00000544800 SLC16A2P36021 539 aa7.94□□□□□ -1.14
CIT-215ENST00000544800 FOSBP53539 338 aa7.94□□□□□ -1.14
CIT-215ENST00000544800 CXADRP78310 365 aa7.94□□□□□ -1.14
CIT-215ENST00000544800 KRT76Q01546 638 aa7.94□□□□□ -1.14
CIT-215ENST00000544800 TRIM61Q5EBN2 209 aa7.94□□□□□ -1.14
CIT-215ENST00000544800 CLLU1OSQ5K130 101 aa7.94□□□□□ -1.14
CIT-215ENST00000544800 UTP14CQ5TAP6 766 aaKnown RBP7.94□□□□□ -1.14
CIT-215ENST00000544800 ZNF746Q6NUN9 644 aaPredicted RBP7.94□□□□□ -1.14
CIT-215ENST00000544800 SPATA31D4Q6ZUB0 917 aa7.94□□□□□ -1.14
CIT-215ENST00000544800 CAMKK1Q8N5S9 505 aa7.94□□□□□ -1.14
CIT-215ENST00000544800 BCL7CQ8WUZ0 217 aaPredicted RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms