RNA–Protein interactions for RNA: ENST00000544596.5

ABCA13-207, Transcript of ATP binding cassette subfamily A member 13, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene ABCA13, Length 7,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-207ENST00000544596 A0A0D9SFI3 127 aa8.61□□□□□ -1.03
ABCA13-207ENST00000544596 SHROOM1Q2M3G4 852 aaPredicted RBP8.61□□□□□ -1.03
ABCA13-207ENST00000544596 ARHGAP17Q68EM7 881 aa8.61□□□□□ -1.03
ABCA13-207ENST00000544596 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.61□□□□□ -1.03
ABCA13-207ENST00000544596 SPATA2LQ8IUW3 424 aaPredicted RBP8.61□□□□□ -1.03
ABCA13-207ENST00000544596 DYNLL2Q96FJ2 89 aa8.61□□□□□ -1.03
ABCA13-207ENST00000544596 DDX50Q9BQ39 737 aaKnown RBP8.61□□□□□ -1.03
ABCA13-207ENST00000544596 PARVBQ9HBI1 364 aa8.61□□□□□ -1.03
ABCA13-207ENST00000544596 FAM47DPA6NHR8 397 aa8.61□□□□□ -1.03
ABCA13-207ENST00000544596 TADA2AO75478 443 aa8.61□□□□□ -1.03
ABCA13-207ENST00000544596 FGGP02679 453 aa8.61□□□□□ -1.03
ABCA13-207ENST00000544596 PDAP1Q13442 181 aaKnown RBP8.61□□□□□ -1.03
ABCA13-207ENST00000544596 CYTH1Q15438 398 aa8.61□□□□□ -1.03
ABCA13-207ENST00000544596 CCDC92Q53HC0 331 aaPredicted RBP8.61□□□□□ -1.03
ABCA13-207ENST00000544596 SGO1Q5FBB7 561 aa8.61□□□□□ -1.03
ABCA13-207ENST00000544596 SYCP2LQ5T4T6 812 aa8.61□□□□□ -1.03
ABCA13-207ENST00000544596 C6orf118Q5T5N4 469 aa8.61□□□□□ -1.03
ABCA13-207ENST00000544596 DHTKD1Q96HY7 919 aaPredicted RBP8.61□□□□□ -1.03
ABCA13-207ENST00000544596 CNOT10Q9H9A5 744 aaKnown RBP8.61□□□□□ -1.03
ABCA13-207ENST00000544596 PCDHB8Q9UN66 801 aa8.61□□□□□ -1.03
ABCA13-207ENST00000544596 AGRPO00253 132 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 LRRC8AQ8IWT6 810 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 TADA1Q96BN2 335 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 GPR101Q96P66 508 aaPredicted RBP8.6□□□□□ -1.03
ABCA13-207ENST00000544596 WRNIP1Q96S55 665 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 SPATA16Q9BXB7 569 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 CUEDC2Q9H467 287 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 CNOT8Q9UFF9 292 aaKnown RBP8.6□□□□□ -1.03
ABCA13-207ENST00000544596 IL10P22301 178 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 COPB2P35606 906 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 MTMR1Q13613 665 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 TFDP2Q14188 446 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 IL31Q6EBC2 164 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 ARHGEF25Q86VW2 580 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 BHMT2Q9H2M3 363 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 NHEJ1Q9H9Q4 299 aaPredicted RBP8.6□□□□□ -1.03
ABCA13-207ENST00000544596 USP17L3A6NCW0 530 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 USP17L4A6NCW7 530 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 GOLGA8RI6L899 631 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 LAD1O00515 517 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 ZBTB7BO15156 539 aaPredicted RBP8.6□□□□□ -1.03
ABCA13-207ENST00000544596 RASSF9O75901 435 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 SERPING1P05155 500 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 MZF1P28698 734 aaPredicted RBP8.6□□□□□ -1.03
ABCA13-207ENST00000544596 CACNB3P54284 484 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 ANKS6Q68DC2 871 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 IYDQ6PHW0 289 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 EPM2AIP1Q7L775 607 aaPredicted RBP8.6□□□□□ -1.03
ABCA13-207ENST00000544596 USP17L1Q7RTZ2 530 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.6□□□□□ -1.03
ABCA13-207ENST00000544596 TMEM35BQ8NCS4 154 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 SH3TC2Q8TF17 1288 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 MMP19Q99542 508 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 TSEN34Q9BSV6 310 aaKnown RBP8.6□□□□□ -1.03
ABCA13-207ENST00000544596 FHDC1Q9C0D6 1143 aaPredicted RBP8.6□□□□□ -1.03
ABCA13-207ENST00000544596 BRD8Q9H0E9 1235 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 MAGEF1Q9HAY2 307 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 POLD4Q9HCU8 107 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 PCDHA13Q9Y5I0 950 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 ATP6V1C1P21283 382 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 ETF1P62495 437 aaKnown RBP8.6□□□□□ -1.03
ABCA13-207ENST00000544596 LRRC8BQ6P9F7 803 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 BHMTQ93088 406 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 OTUD5Q96G74 571 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 RMDN3Q96TC7 470 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 PSD3Q9NYI0 1048 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 CDC23Q9UJX2 597 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 NPATQ14207 1427 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 CTSHP09668 335 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 MLNP12872 115 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 USP39Q53GS9 565 aaKnown RBP8.6□□□□□ -1.03
ABCA13-207ENST00000544596 PID1Q7Z2X4 250 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 ZNF555Q8NEP9 628 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 AGAP3Q96P47 875 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 BBS2Q9BXC9 721 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 OLFML3Q9NRN5 406 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 RNF181Q9P0P0 153 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 KBTBD13C9JR72 458 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 CTIFO43310 598 aaKnown RBP8.6□□□□□ -1.03
ABCA13-207ENST00000544596 ATP1A1P05023 1023 aaKnown RBP8.6□□□□□ -1.03
ABCA13-207ENST00000544596 CRKLP46109 303 aaKnown RBP8.6□□□□□ -1.03
ABCA13-207ENST00000544596 ITPRIPL1Q6GPH6 555 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 ICA1LQ8NDH6 482 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 USP33Q8TEY7 942 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 USP6NLQ92738 828 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 PNKPQ96T60 521 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 C11orf70Q9BRQ4 267 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 RERGLQ9H628 205 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 LEMD3Q9Y2U8 911 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 SH3BP1Q9Y3L3 701 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 ADGRA2Q96PE1 1338 aa8.6□□□□□ -1.03
ABCA13-207ENST00000544596 MAP3K13O43283 966 aa8.59□□□□□ -1.03
ABCA13-207ENST00000544596 USP17L8P0C7I0 530 aa8.59□□□□□ -1.03
ABCA13-207ENST00000544596 GCFC2P16383 781 aaKnown RBP8.59□□□□□ -1.03
ABCA13-207ENST00000544596 TYK2P29597 1187 aa8.59□□□□□ -1.03
ABCA13-207ENST00000544596 PTH1RQ03431 593 aa8.59□□□□□ -1.03
ABCA13-207ENST00000544596 SNRNP48Q6IEG0 339 aaKnown RBP8.59□□□□□ -1.03
ABCA13-207ENST00000544596 APOA5Q6Q788 366 aa8.59□□□□□ -1.03
ABCA13-207ENST00000544596 FAM160B2Q86V87 743 aa8.59□□□□□ -1.03
ABCA13-207ENST00000544596 DGKHQ86XP1 1220 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms