RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, human

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LEMD3-205	ENST00000544506	LIMS2	Q7Z4I7	341 aa		7.06	□□□□□ -1.28
LEMD3-205	ENST00000544506	JADE3	Q92613	823 aa		7.06	□□□□□ -1.28
LEMD3-205	ENST00000544506	RABGGTA	Q92696	567 aa		7.06	□□□□□ -1.28
LEMD3-205	ENST00000544506	GPHA2	Q96T91	129 aa		7.06	□□□□□ -1.28
LEMD3-205	ENST00000544506	BDH2	Q9BUT1	245 aa		7.06	□□□□□ -1.28
LEMD3-205	ENST00000544506	SLC13A1	Q9BZW2	595 aa		7.06	□□□□□ -1.28
LEMD3-205	ENST00000544506	GPR42	O15529	346 aa		7.05	□□□□□ -1.28
LEMD3-205	ENST00000544506	MTSS1	O43312	755 aa		7.05	□□□□□ -1.28
LEMD3-205	ENST00000544506	PRAMEF4	O60810	478 aa		7.05	□□□□□ -1.28
LEMD3-205	ENST00000544506	ALDH1L1	O75891	902 aa		7.05	□□□□□ -1.28
LEMD3-205	ENST00000544506	JUN	P05412	331 aa	Known RBP	7.05	□□□□□ -1.28
LEMD3-205	ENST00000544506	CTSW	P56202	376 aa		7.05	□□□□□ -1.28
LEMD3-205	ENST00000544506	DUSP8	Q13202	625 aa		7.05	□□□□□ -1.28
LEMD3-205	ENST00000544506	RIN1	Q13671	783 aa		7.05	□□□□□ -1.28
LEMD3-205	ENST00000544506	UBE3C	Q15386	1083 aa		7.05	□□□□□ -1.28
LEMD3-205	ENST00000544506	BTNL9	Q6UXG8	535 aa		7.05	□□□□□ -1.28
LEMD3-205	ENST00000544506	ABHD15	Q6UXT9	468 aa		7.05	□□□□□ -1.28
LEMD3-205	ENST00000544506	ZBTB46	Q86UZ6	589 aa		7.05	□□□□□ -1.28
LEMD3-205	ENST00000544506	PNMA8A	Q86V59	439 aa	Predicted RBP	7.05	□□□□□ -1.28
LEMD3-205	ENST00000544506	TAX1BP1	Q86VP1	789 aa		7.05	□□□□□ -1.28
LEMD3-205	ENST00000544506	GPR135	Q8IZ08	494 aa		7.05	□□□□□ -1.28
LEMD3-205	ENST00000544506	SHCBP1	Q8NEM2	672 aa		7.05	□□□□□ -1.28
LEMD3-205	ENST00000544506	SSH1	Q8WYL5	1049 aa		7.05	□□□□□ -1.28
LEMD3-205	ENST00000544506	FATE1	Q969F0	183 aa		7.05	□□□□□ -1.28
LEMD3-205	ENST00000544506	PAWR	Q96IZ0	340 aa	Known RBP	7.05	□□□□□ -1.28
LEMD3-205	ENST00000544506	SSBP3	Q9BWW4	388 aa	Predicted RBP	7.05	□□□□□ -1.28
LEMD3-205	ENST00000544506	SCOC	Q9UIL1	159 aa		7.05	□□□□□ -1.28
LEMD3-205	ENST00000544506	MRFAP1	Q9Y605	127 aa		7.05	□□□□□ -1.28
LEMD3-205	ENST00000544506	PMS2P1	A4D2B8	440 aa		7.04	□□□□□ -1.28
LEMD3-205	ENST00000544506	KLHL33	A6NCF5	533 aa		7.04	□□□□□ -1.28
LEMD3-205	ENST00000544506	PPM1G	O15355	546 aa	Predicted RBP	7.04	□□□□□ -1.28
LEMD3-205	ENST00000544506	CTSS	P25774	331 aa		7.04	□□□□□ -1.28
LEMD3-205	ENST00000544506	GLB1L	Q6UWU2	654 aa		7.04	□□□□□ -1.28
LEMD3-205	ENST00000544506	ADGRE4P	Q86SQ3	457 aa		7.04	□□□□□ -1.28
LEMD3-205	ENST00000544506	KRTAP1-3	Q8IUG1	177 aa		7.04	□□□□□ -1.28
LEMD3-205	ENST00000544506	GIMAP8	Q8ND71	665 aa	Predicted RBP	7.04	□□□□□ -1.28
LEMD3-205	ENST00000544506	CHMP4C	Q96CF2	233 aa		7.04	□□□□□ -1.28
LEMD3-205	ENST00000544506	TEKT5	Q96M29	485 aa		7.04	□□□□□ -1.28
LEMD3-205	ENST00000544506	RBM15	Q96T37	977 aa	Known RBP eCLIP	7.04	□□□□□ -1.28
LEMD3-205	ENST00000544506	PLA2G12B	Q9BX93	195 aa		7.04	□□□□□ -1.28
LEMD3-205	ENST00000544506	AGO3	Q9H9G7	860 aa	Known RBP	7.04	□□□□□ -1.28
LEMD3-205	ENST00000544506	MSL2	Q9HCI7	577 aa		7.04	□□□□□ -1.28
LEMD3-205	ENST00000544506	DMRT3	Q9NQL9	472 aa		7.04	□□□□□ -1.28
LEMD3-205	ENST00000544506	TLR9	Q9NR96	1032 aa		7.04	□□□□□ -1.28
LEMD3-205	ENST00000544506	ITGB3	P05106	788 aa		7.03	□□□□□ -1.28
LEMD3-205	ENST00000544506	C5AR1	P21730	350 aa		7.03	□□□□□ -1.28
LEMD3-205	ENST00000544506	CCND1	P24385	295 aa		7.03	□□□□□ -1.28
LEMD3-205	ENST00000544506	MALL	Q13021	153 aa		7.03	□□□□□ -1.28
LEMD3-205	ENST00000544506	ODF1	Q14990	250 aa		7.03	□□□□□ -1.28
LEMD3-205	ENST00000544506	TTF1	Q15361	905 aa	Predicted RBP	7.03	□□□□□ -1.28
LEMD3-205	ENST00000544506	MUM1L1	Q5H9M0	696 aa		7.03	□□□□□ -1.28
LEMD3-205	ENST00000544506	CIR1	Q86X95	450 aa	Predicted RBP	7.03	□□□□□ -1.28
LEMD3-205	ENST00000544506	CXorf38	Q8TB03	319 aa		7.03	□□□□□ -1.28
LEMD3-205	ENST00000544506	SNX33	Q8WV41	574 aa		7.03	□□□□□ -1.28
LEMD3-205	ENST00000544506	RIN2	Q8WYP3	895 aa	Predicted RBP	7.03	□□□□□ -1.28
LEMD3-205	ENST00000544506	OR14A2	Q96R54	314 aa		7.03	□□□□□ -1.28
LEMD3-205	ENST00000544506	GREM2	Q9H772	168 aa		7.03	□□□□□ -1.28
LEMD3-205	ENST00000544506	NCDN	Q9UBB6	729 aa		7.03	□□□□□ -1.28
LEMD3-205	ENST00000544506	TUBD1	Q9UJT1	453 aa		7.03	□□□□□ -1.28
LEMD3-205	ENST00000544506		A0A1W2PRX2	142 aa		7.02	□□□□□ -1.29
LEMD3-205	ENST00000544506	NDUFS2	O75306	463 aa		7.02	□□□□□ -1.29
LEMD3-205	ENST00000544506	WNT3A	P56704	352 aa		7.02	□□□□□ -1.29
LEMD3-205	ENST00000544506	MCL1	Q07820	350 aa		7.02	□□□□□ -1.29
LEMD3-205	ENST00000544506	PPP3CA	Q08209	521 aa		7.02	□□□□□ -1.29
LEMD3-205	ENST00000544506	ODR4	Q5SWX8	454 aa		7.02	□□□□□ -1.29
LEMD3-205	ENST00000544506	TCTN3	Q6NUS6	607 aa		7.02	□□□□□ -1.29
LEMD3-205	ENST00000544506	CMTM4	Q8IZR5	234 aa		7.02	□□□□□ -1.29
LEMD3-205	ENST00000544506	PPM1N	Q8N819	430 aa		7.02	□□□□□ -1.29
LEMD3-205	ENST00000544506	IL23A	Q9NPF7	189 aa		7.02	□□□□□ -1.29
LEMD3-205	ENST00000544506	RCAN3	Q9UKA8	241 aa		7.02	□□□□□ -1.29
LEMD3-205	ENST00000544506	ZBTB21	Q9ULJ3	1066 aa		7.02	□□□□□ -1.29
LEMD3-205	ENST00000544506	RPTOR	Q8N122	1335 aa		7.01	□□□□□ -1.29
LEMD3-205	ENST00000544506	NRP1	O14786	923 aa		7.01	□□□□□ -1.29
LEMD3-205	ENST00000544506	FOXS1	O43638	330 aa		7.01	□□□□□ -1.29
LEMD3-205	ENST00000544506	RPS19	P39019	145 aa	Known RBP	7.01	□□□□□ -1.29
LEMD3-205	ENST00000544506	MCAM	P43121	646 aa		7.01	□□□□□ -1.29
LEMD3-205	ENST00000544506	C19orf54	Q5BKX5	351 aa		7.01	□□□□□ -1.29
LEMD3-205	ENST00000544506	EFCAB2	Q5VUJ9	269 aa		7.01	□□□□□ -1.29
LEMD3-205	ENST00000544506	FUK	Q8N0W3	1084 aa		7.01	□□□□□ -1.29
LEMD3-205	ENST00000544506	GPR156	Q8NFN8	814 aa		7.01	□□□□□ -1.29
LEMD3-205	ENST00000544506	HOOK2	Q96ED9	719 aa		7.01	□□□□□ -1.29
LEMD3-205	ENST00000544506	ADI1	Q9BV57	179 aa		7.01	□□□□□ -1.29
LEMD3-205	ENST00000544506	NELFA	Q9H3P2	528 aa		7.01	□□□□□ -1.29
LEMD3-205	ENST00000544506	AASDHPPT	Q9NRN7	309 aa		7.01	□□□□□ -1.29
LEMD3-205	ENST00000544506	RBM12	Q9NTZ6	932 aa	Known RBP	7.01	□□□□□ -1.29
LEMD3-205	ENST00000544506	ZFR2	Q9UPR6	939 aa	Known RBP	7.01	□□□□□ -1.29
LEMD3-205	ENST00000544506	UBE2QL1	A1L167	161 aa		7	□□□□□ -1.29
LEMD3-205	ENST00000544506	AKR1B10	O60218	316 aa		7	□□□□□ -1.29
LEMD3-205	ENST00000544506	SNUPN	O95149	360 aa	Known RBP	7	□□□□□ -1.29
LEMD3-205	ENST00000544506	S100B	P04271	92 aa	Predicted RBP	7	□□□□□ -1.29
LEMD3-205	ENST00000544506	ADSL	P30566	484 aa	Predicted RBP	7	□□□□□ -1.29
LEMD3-205	ENST00000544506	RECQL	P46063	649 aa	Predicted RBP	7	□□□□□ -1.29
LEMD3-205	ENST00000544506	DUSP2	Q05923	314 aa		7	□□□□□ -1.29
LEMD3-205	ENST00000544506	MST1L	Q2TV78	715 aa		7	□□□□□ -1.29
LEMD3-205	ENST00000544506	LILRA3	Q8N6C8	439 aa	Predicted RBP	7	□□□□□ -1.29
LEMD3-205	ENST00000544506	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	7	□□□□□ -1.29
LEMD3-205	ENST00000544506	ZNF480	Q8WV37	535 aa		7	□□□□□ -1.29
LEMD3-205	ENST00000544506	TMEM176A	Q96HP8	235 aa		7	□□□□□ -1.29
LEMD3-205	ENST00000544506	PUS7	Q96PZ0	661 aa	Known RBP	7	□□□□□ -1.29
LEMD3-205	ENST00000544506	DNM3	Q9UQ16	869 aa		7	□□□□□ -1.29

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