RNA–Protein interactions for RNA: ENST00000544381.3

MDH1-216, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-216ENST00000544381 CALUO43852 315 aaPredicted RBP11.04□□□□□ -0.64
MDH1-216ENST00000544381 PRPF6O94906 941 aaKnown RBP11.04□□□□□ -0.64
MDH1-216ENST00000544381 ARIH2O95376 493 aa11.04□□□□□ -0.64
MDH1-216ENST00000544381 MYBP10242 640 aa11.04□□□□□ -0.64
MDH1-216ENST00000544381 XRCC5P13010 732 aaKnown RBP11.04□□□□□ -0.64
MDH1-216ENST00000544381 PTGS1P23219 599 aa11.04□□□□□ -0.64
MDH1-216ENST00000544381 TCF7P36402 384 aaPredicted RBP11.04□□□□□ -0.64
MDH1-216ENST00000544381 MTIF2P46199 727 aaKnown RBP11.04□□□□□ -0.64
MDH1-216ENST00000544381 STAT5BP51692 787 aa11.04□□□□□ -0.64
MDH1-216ENST00000544381 CASP5P51878 434 aa11.04□□□□□ -0.64
MDH1-216ENST00000544381 COPB1P53618 953 aaKnown RBP11.04□□□□□ -0.64
MDH1-216ENST00000544381 GSDMDP57764 484 aa11.04□□□□□ -0.64
MDH1-216ENST00000544381 FKBP3Q00688 224 aaKnown RBP11.04□□□□□ -0.64
MDH1-216ENST00000544381 NR1I3Q14994 352 aa11.04□□□□□ -0.64
MDH1-216ENST00000544381 FAM102BQ5T8I3 360 aa11.04□□□□□ -0.64
MDH1-216ENST00000544381 CCDC62Q6P9F0 684 aa11.04□□□□□ -0.64
MDH1-216ENST00000544381 MAMDC4Q6UXC1 1216 aa11.04□□□□□ -0.64
MDH1-216ENST00000544381 EPM2AIP1Q7L775 607 aaPredicted RBP11.04□□□□□ -0.64
MDH1-216ENST00000544381 IRF2BP1Q8IU81 584 aa11.04□□□□□ -0.64
MDH1-216ENST00000544381 VSTM4Q8IW00 320 aa11.04□□□□□ -0.64
MDH1-216ENST00000544381 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.04□□□□□ -0.64
MDH1-216ENST00000544381 MSL3Q8N5Y2 521 aaKnown RBP11.04□□□□□ -0.64
MDH1-216ENST00000544381 ZNF507Q8TCN5 953 aa11.04□□□□□ -0.64
MDH1-216ENST00000544381 MAML3Q96JK9 1138 aa11.04□□□□□ -0.64
MDH1-216ENST00000544381 SPATA33Q96N06 139 aa11.04□□□□□ -0.64
MDH1-216ENST00000544381 SH2D3AQ9BRG2 576 aa11.04□□□□□ -0.64
MDH1-216ENST00000544381 VPS16Q9H269 839 aa11.04□□□□□ -0.64
MDH1-216ENST00000544381 CYP26B1Q9NR63 512 aa11.04□□□□□ -0.64
MDH1-216ENST00000544381 PDGFCQ9NRA1 345 aa11.04□□□□□ -0.64
MDH1-216ENST00000544381 TAB2Q9NYJ8 693 aa11.04□□□□□ -0.64
MDH1-216ENST00000544381 UBE4BO95155 1302 aa11.03□□□□□ -0.64
MDH1-216ENST00000544381 CFAP99D6REC4 459 aa11.03□□□□□ -0.64
MDH1-216ENST00000544381 PES1O00541 588 aaKnown RBP11.03□□□□□ -0.64
MDH1-216ENST00000544381 STBD1O95210 358 aa11.03□□□□□ -0.64
MDH1-216ENST00000544381 SNAI1O95863 264 aaPredicted RBP11.03□□□□□ -0.64
MDH1-216ENST00000544381 GH1P01241 217 aa11.03□□□□□ -0.64
MDH1-216ENST00000544381 IGHA2P01877 340 aa11.03□□□□□ -0.64
MDH1-216ENST00000544381 MAPTP10636 758 aaKnown RBP11.03□□□□□ -0.64
MDH1-216ENST00000544381 PLS3P13797 630 aa11.03□□□□□ -0.64
MDH1-216ENST00000544381 PRKCSHP14314 528 aaPredicted RBP11.03□□□□□ -0.64
MDH1-216ENST00000544381 MSNP26038 577 aaKnown RBP11.03□□□□□ -0.64
MDH1-216ENST00000544381 NMT1P30419 496 aaKnown RBP11.03□□□□□ -0.64
MDH1-216ENST00000544381 MAPK7Q13164 816 aa11.03□□□□□ -0.64
MDH1-216ENST00000544381 ALCAMQ13740 583 aa11.03□□□□□ -0.64
MDH1-216ENST00000544381 LAMC2Q13753 1193 aa11.03□□□□□ -0.64
MDH1-216ENST00000544381 BMT2Q1RMZ1 405 aa11.03□□□□□ -0.64
MDH1-216ENST00000544381 EDRF1Q3B7T1 1238 aa11.03□□□□□ -0.64
MDH1-216ENST00000544381 MTERF2Q49AM1 385 aa11.03□□□□□ -0.64
MDH1-216ENST00000544381 APTXQ7Z2E3 356 aaKnown RBP11.03□□□□□ -0.64
MDH1-216ENST00000544381 ZNF720Q7Z2F6 126 aa11.03□□□□□ -0.64
MDH1-216ENST00000544381 ZSCAN30Q86W11 494 aa11.03□□□□□ -0.64
MDH1-216ENST00000544381 MCPH1Q8NEM0 835 aa11.03□□□□□ -0.64
MDH1-216ENST00000544381 NPLOC4Q8TAT6 608 aa11.03□□□□□ -0.64
MDH1-216ENST00000544381 AFAP1L1Q8TED9 768 aa11.03□□□□□ -0.64
MDH1-216ENST00000544381 KIFAP3Q92845 792 aa11.03□□□□□ -0.64
MDH1-216ENST00000544381 GLG1Q92896 1179 aa11.03□□□□□ -0.64
MDH1-216ENST00000544381 FAM167AQ96KS9 214 aa11.03□□□□□ -0.64
MDH1-216ENST00000544381 CNOT6LQ96LI5 555 aaKnown RBP11.03□□□□□ -0.64
MDH1-216ENST00000544381 CEP63Q96MT8 703 aa11.03□□□□□ -0.64
MDH1-216ENST00000544381 GPR20Q99678 358 aa11.03□□□□□ -0.64
MDH1-216ENST00000544381 TINF2Q9BSI4 451 aa11.03□□□□□ -0.64
MDH1-216ENST00000544381 KCTD10Q9H3F6 313 aa11.03□□□□□ -0.64
MDH1-216ENST00000544381 ATP6V0A4Q9HBG4 840 aa11.03□□□□□ -0.64
MDH1-216ENST00000544381 FLRT1Q9NZU1 646 aa11.03□□□□□ -0.64
MDH1-216ENST00000544381 ZNF236Q9UL36 1845 aa11.03□□□□□ -0.64
MDH1-216ENST00000544381 ARID2Q68CP9 1835 aa11.02□□□□□ -0.65
MDH1-216ENST00000544381 RBM47A0AV96 593 aaKnown RBP11.02□□□□□ -0.65
MDH1-216ENST00000544381 K7ENM7 598 aa11.02□□□□□ -0.65
MDH1-216ENST00000544381 PDXKO00764 312 aa11.02□□□□□ -0.65
MDH1-216ENST00000544381 CETN3O15182 167 aa11.02□□□□□ -0.65
MDH1-216ENST00000544381 GNA14O95837 355 aa11.02□□□□□ -0.65
MDH1-216ENST00000544381 RPL13P26373 211 aaKnown RBP11.02□□□□□ -0.65
MDH1-216ENST00000544381 SMTNP53814 917 aa11.02□□□□□ -0.65
MDH1-216ENST00000544381 POLGP54098 1239 aaPredicted RBP11.02□□□□□ -0.65
MDH1-216ENST00000544381 KCNH2Q12809 1159 aa11.02□□□□□ -0.65
MDH1-216ENST00000544381 TUSC1Q2TAM9 212 aa11.02□□□□□ -0.65
MDH1-216ENST00000544381 CCDC144BQ3MJ40 725 aa11.02□□□□□ -0.65
MDH1-216ENST00000544381 CCDC40Q4G0X9 1142 aa11.02□□□□□ -0.65
MDH1-216ENST00000544381 ZCWPW2Q504Y3 356 aa11.02□□□□□ -0.65
MDH1-216ENST00000544381 SPECC1LQ69YQ0 1117 aa11.02□□□□□ -0.65
MDH1-216ENST00000544381 ZNF787Q6DD87 383 aa11.02□□□□□ -0.65
MDH1-216ENST00000544381 FAM109BQ6ICB4 259 aaPredicted RBP11.02□□□□□ -0.65
MDH1-216ENST00000544381 TAPT1Q6NXT6 567 aa11.02□□□□□ -0.65
MDH1-216ENST00000544381 LYPD8Q6UX82 237 aa11.02□□□□□ -0.65
MDH1-216ENST00000544381 SYCP3Q8IZU3 236 aa11.02□□□□□ -0.65
MDH1-216ENST00000544381 DAW1Q8N136 415 aa11.02□□□□□ -0.65
MDH1-216ENST00000544381 CCDC150Q8NCX0 1101 aa11.02□□□□□ -0.65
MDH1-216ENST00000544381 COPS5Q92905 334 aa11.02□□□□□ -0.65
MDH1-216ENST00000544381 EEF2KMTQ96G04 330 aa11.02□□□□□ -0.65
MDH1-216ENST00000544381 ZNF830Q96NB3 372 aaPredicted RBP11.02□□□□□ -0.65
MDH1-216ENST00000544381 PCYT2Q99447 389 aa11.02□□□□□ -0.65
MDH1-216ENST00000544381 TUBGCP2Q9BSJ2 902 aa11.02□□□□□ -0.65
MDH1-216ENST00000544381 NIFKQ9BYG3 293 aaKnown RBP11.02□□□□□ -0.65
MDH1-216ENST00000544381 ABHD16BQ9H3Z7 469 aa11.02□□□□□ -0.65
MDH1-216ENST00000544381 SMARCAD1Q9H4L7 1026 aa11.02□□□□□ -0.65
MDH1-216ENST00000544381 TYW1Q9NV66 732 aaKnown RBP11.02□□□□□ -0.65
MDH1-216ENST00000544381 INTS13Q9NVM9 706 aa11.02□□□□□ -0.65
MDH1-216ENST00000544381 ZKSCAN5Q9Y2L8 839 aa11.02□□□□□ -0.65
MDH1-216ENST00000544381 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.02□□□□□ -0.65
MDH1-216ENST00000544381 CHD9Q3L8U1 2897 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms