RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 MAP7D2Q96T17 732 aa33.27■■■□□ 2.92
CCM2-219ENST00000544363 PCNTO95613 3336 aa33.26■■■□□ 2.92
CCM2-219ENST00000544363 PTENP60484 403 aa33.26■■■□□ 2.91
CCM2-219ENST00000544363 LRRC8AQ8IWT6 810 aa33.26■■■□□ 2.91
CCM2-219ENST00000544363 CACTINQ8WUQ7 758 aaKnown RBP33.26■■■□□ 2.91
CCM2-219ENST00000544363 NFKBIZQ9BYH8 718 aa33.26■■■□□ 2.91
CCM2-219ENST00000544363 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP33.26■■■□□ 2.91
CCM2-219ENST00000544363 MBLAC1A4D2B0 266 aaPredicted RBP33.25■■■□□ 2.91
CCM2-219ENST00000544363 MAPK13O15264 365 aa33.25■■■□□ 2.91
CCM2-219ENST00000544363 KCNH2Q12809 1159 aa33.25■■■□□ 2.91
CCM2-219ENST00000544363 POMGNT1Q8WZA1 660 aa33.25■■■□□ 2.91
CCM2-219ENST00000544363 KCNF1Q9H3M0 494 aa33.25■■■□□ 2.91
CCM2-219ENST00000544363 DDX20Q9UHI6 824 aaKnown RBP33.25■■■□□ 2.91
CCM2-219ENST00000544363 STYXL1Q9Y6J8 313 aa33.25■■■□□ 2.91
CCM2-219ENST00000544363 ADAM17P78536 824 aa33.24■■■□□ 2.91
CCM2-219ENST00000544363 SYCP1Q15431 976 aa33.24■■■□□ 2.91
CCM2-219ENST00000544363 MAPK6Q16659 721 aa33.24■■■□□ 2.91
CCM2-219ENST00000544363 PPFIBP1Q86W92 1011 aa33.24■■■□□ 2.91
CCM2-219ENST00000544363 KIAA0319LQ8IZA0 1049 aa33.24■■■□□ 2.91
CCM2-219ENST00000544363 KLHDC9Q8NEP7 349 aa33.24■■■□□ 2.91
CCM2-219ENST00000544363 PPP1R13LQ8WUF5 828 aa33.24■■■□□ 2.91
CCM2-219ENST00000544363 MSCO60682 206 aa33.24■■■□□ 2.91
CCM2-219ENST00000544363 VTNP04004 478 aa33.24■■■□□ 2.91
CCM2-219ENST00000544363 RDH13Q8NBN7 331 aa33.24■■■□□ 2.91
CCM2-219ENST00000544363 ZNF668Q96K58 619 aaPredicted RBP33.24■■■□□ 2.91
CCM2-219ENST00000544363 TARS2Q9BW92 718 aaKnown RBP33.24■■■□□ 2.91
CCM2-219ENST00000544363 USP20Q9Y2K6 914 aa33.24■■■□□ 2.91
CCM2-219ENST00000544363 TRIM17Q9Y577 477 aa33.24■■■□□ 2.91
CCM2-219ENST00000544363 AFPP02771 609 aaKnown RBP33.23■■■□□ 2.91
CCM2-219ENST00000544363 INHAP05111 366 aa33.23■■■□□ 2.91
CCM2-219ENST00000544363 EDN1P05305 212 aa33.23■■■□□ 2.91
CCM2-219ENST00000544363 PRKCBP05771 671 aa33.23■■■□□ 2.91
CCM2-219ENST00000544363 SFPQP23246 707 aaKnown RBP eCLIP33.23■■■□□ 2.91
CCM2-219ENST00000544363 CST5P28325 142 aaPredicted RBP33.23■■■□□ 2.91
CCM2-219ENST00000544363 PHKA2P46019 1235 aa33.23■■■□□ 2.91
CCM2-219ENST00000544363 TRIM14Q14142 442 aa33.23■■■□□ 2.91
CCM2-219ENST00000544363 DCAF17Q5H9S7 520 aaPredicted RBP33.23■■■□□ 2.91
CCM2-219ENST00000544363 SLFN12LQ6IEE8 588 aa33.23■■■□□ 2.91
CCM2-219ENST00000544363 IFNLR1Q8IU57 520 aaPredicted RBP33.23■■■□□ 2.91
CCM2-219ENST00000544363 ZSWIM2Q8NEG5 633 aa33.23■■■□□ 2.91
CCM2-219ENST00000544363 SLC35C1Q96A29 364 aa33.23■■■□□ 2.91
CCM2-219ENST00000544363 IFT122Q9HBG6 1241 aa33.23■■■□□ 2.91
CCM2-219ENST00000544363 SMIM35A0A1B0GVV1 85 aa33.22■■■□□ 2.91
CCM2-219ENST00000544363 GRK4P32298 578 aa33.22■■■□□ 2.91
CCM2-219ENST00000544363 RBL2Q08999 1139 aa33.22■■■□□ 2.91
CCM2-219ENST00000544363 HIC1Q14526 733 aa33.22■■■□□ 2.91
CCM2-219ENST00000544363 TCERG1LQ5VWI1 586 aa33.22■■■□□ 2.91
CCM2-219ENST00000544363 CXCL17Q6UXB2 119 aa33.22■■■□□ 2.91
CCM2-219ENST00000544363 ZPBP2Q6X784 338 aa33.22■■■□□ 2.91
CCM2-219ENST00000544363 C7orf31Q8N865 590 aa33.22■■■□□ 2.91
CCM2-219ENST00000544363 FBXL18Q96ME1 805 aa33.22■■■□□ 2.91
CCM2-219ENST00000544363 MRPL4Q9BYD3 311 aaKnown RBP33.22■■■□□ 2.91
CCM2-219ENST00000544363 FZD8Q9H461 694 aa33.22■■■□□ 2.91
CCM2-219ENST00000544363 HDAC6Q9UBN7 1215 aa33.22■■■□□ 2.91
CCM2-219ENST00000544363 C17orf102A2RUQ5 167 aa33.21■■■□□ 2.91
CCM2-219ENST00000544363 HOXC8P31273 242 aa33.21■■■□□ 2.91
CCM2-219ENST00000544363 INTS8Q75QN2 995 aaKnown RBP33.21■■■□□ 2.91
CCM2-219ENST00000544363 SIK3Q9Y2K2 1263 aa33.21■■■□□ 2.91
CCM2-219ENST00000544363 ZKSCAN5Q9Y2L8 839 aa33.21■■■□□ 2.91
CCM2-219ENST00000544363 PTCH2Q9Y6C5 1203 aa33.21■■■□□ 2.91
CCM2-219ENST00000544363 A0A087WZ62 844 aa33.2■■■□□ 2.91
CCM2-219ENST00000544363 GOLGA8IPA6NC78 632 aa33.2■■■□□ 2.91
CCM2-219ENST00000544363 GOLGA8JA6NMD2 632 aa33.2■■■□□ 2.91
CCM2-219ENST00000544363 KIAA0391O15091 583 aaKnown RBP33.2■■■□□ 2.91
CCM2-219ENST00000544363 GYPCP04921 128 aa33.2■■■□□ 2.91
CCM2-219ENST00000544363 GNAT1P11488 350 aa33.2■■■□□ 2.91
CCM2-219ENST00000544363 CYP2C9P11712 490 aa33.2■■■□□ 2.91
CCM2-219ENST00000544363 KRT13P13646 458 aa33.2■■■□□ 2.91
CCM2-219ENST00000544363 MBTD1Q05BQ5 628 aa33.2■■■□□ 2.91
CCM2-219ENST00000544363 LRMPQ12912 555 aa33.2■■■□□ 2.91
CCM2-219ENST00000544363 BFSP1Q12934 665 aa33.2■■■□□ 2.91
CCM2-219ENST00000544363 SAAL1Q96ER3 474 aa33.2■■■□□ 2.91
CCM2-219ENST00000544363 FDXACB1Q9BRP7 624 aaPredicted RBP33.2■■■□□ 2.91
CCM2-219ENST00000544363 INO80B-WBP1J3KQ70 363 aa33.2■■■□□ 2.9
CCM2-219ENST00000544363 TPM1P09493 284 aa33.2■■■□□ 2.9
CCM2-219ENST00000544363 GPC3P51654 580 aa33.2■■■□□ 2.9
CCM2-219ENST00000544363 CCSAPQ6IQ19 270 aaPredicted RBP33.2■■■□□ 2.9
CCM2-219ENST00000544363 GPD1LQ8N335 351 aa33.2■■■□□ 2.9
CCM2-219ENST00000544363 CCDC155Q8N6L0 562 aa33.2■■■□□ 2.9
CCM2-219ENST00000544363 PCMTD1Q96MG8 357 aaPredicted RBP33.2■■■□□ 2.9
CCM2-219ENST00000544363 NUP58Q9BVL2 599 aa33.2■■■□□ 2.9
CCM2-219ENST00000544363 INO80BQ9C086 356 aaPredicted RBP33.2■■■□□ 2.9
CCM2-219ENST00000544363 SCN10AQ9Y5Y9 1956 aa33.19■■■□□ 2.9
CCM2-219ENST00000544363 AKR1B15C9JRZ8 316 aaPredicted RBP33.19■■■□□ 2.9
CCM2-219ENST00000544363 ACKR2O00590 384 aa33.19■■■□□ 2.9
CCM2-219ENST00000544363 KLK7P49862 253 aa33.19■■■□□ 2.9
CCM2-219ENST00000544363 CDC42EP1Q00587 391 aa33.19■■■□□ 2.9
CCM2-219ENST00000544363 GOLGA8FQ08AF8 430 aa33.19■■■□□ 2.9
CCM2-219ENST00000544363 GOLGA8DPQ0D2H9 430 aa33.19■■■□□ 2.9
CCM2-219ENST00000544363 KCNA10Q16322 511 aa33.19■■■□□ 2.9
CCM2-219ENST00000544363 SNRNP35Q16560 246 aaKnown RBP33.19■■■□□ 2.9
CCM2-219ENST00000544363 ZNF410Q86VK4 478 aa33.19■■■□□ 2.9
CCM2-219ENST00000544363 TC2NQ8N9U0 490 aa33.19■■■□□ 2.9
CCM2-219ENST00000544363 CPLX3Q8WVH0 158 aa33.19■■■□□ 2.9
CCM2-219ENST00000544363 ACO2Q99798 780 aaKnown RBP33.19■■■□□ 2.9
CCM2-219ENST00000544363 MINDY3Q9H8M7 445 aa33.19■■■□□ 2.9
CCM2-219ENST00000544363 HMX1Q9NP08 348 aaPredicted RBP33.19■■■□□ 2.9
CCM2-219ENST00000544363 WBP1LQ9NX94 342 aa33.19■■■□□ 2.9
CCM2-219ENST00000544363 ASGR1P07306 291 aa33.18■■■□□ 2.9
CCM2-219ENST00000544363 CASP14P31944 242 aa33.18■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms