RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 TBC1D8BQ0IIM8 1120 aa10.68□□□□□ -0.7
C2CD3-220ENST00000544293 PUM1Q14671 1186 aaKnown RBP eCLIP10.68□□□□□ -0.7
C2CD3-220ENST00000544293 BMS1Q14692 1282 aaKnown RBP10.68□□□□□ -0.7
C2CD3-220ENST00000544293 SPECC1Q5M775 1068 aa10.68□□□□□ -0.7
C2CD3-220ENST00000544293 TWF2Q6IBS0 349 aaKnown RBP10.68□□□□□ -0.7
C2CD3-220ENST00000544293 LILRA6Q6PI73 481 aa10.68□□□□□ -0.7
C2CD3-220ENST00000544293 GLB1LQ6UWU2 654 aa10.68□□□□□ -0.7
C2CD3-220ENST00000544293 SPATA31D4Q6ZUB0 917 aa10.68□□□□□ -0.7
C2CD3-220ENST00000544293 ANO5Q75V66 913 aa10.68□□□□□ -0.7
C2CD3-220ENST00000544293 C1orf210Q8IVY1 113 aa10.68□□□□□ -0.7
C2CD3-220ENST00000544293 COLGALT2Q8IYK4 626 aa10.68□□□□□ -0.7
C2CD3-220ENST00000544293 SMG8Q8ND04 991 aaKnown RBP10.68□□□□□ -0.7
C2CD3-220ENST00000544293 RPS6KC1Q96S38 1066 aa10.68□□□□□ -0.7
C2CD3-220ENST00000544293 ESYT1Q9BSJ8 1104 aa10.68□□□□□ -0.7
C2CD3-220ENST00000544293 FOXQ1Q9C009 403 aa10.68□□□□□ -0.7
C2CD3-220ENST00000544293 GLT8D2Q9H1C3 349 aa10.68□□□□□ -0.7
C2CD3-220ENST00000544293 MAN1C1Q9NR34 630 aa10.68□□□□□ -0.7
C2CD3-220ENST00000544293 CHST7Q9NS84 486 aa10.68□□□□□ -0.7
C2CD3-220ENST00000544293 MTF2Q9Y483 593 aaPredicted RBP10.68□□□□□ -0.7
C2CD3-220ENST00000544293 SAMM50Q9Y512 469 aa10.68□□□□□ -0.7
C2CD3-220ENST00000544293 CACNA1BQ00975 2339 aa10.68□□□□□ -0.7
C2CD3-220ENST00000544293 WDR87Q6ZQQ6 2873 aa10.67□□□□□ -0.7
C2CD3-220ENST00000544293 SHISA7A6NL88 538 aa10.67□□□□□ -0.7
C2CD3-220ENST00000544293 C2CD2LO14523 706 aa10.67□□□□□ -0.7
C2CD3-220ENST00000544293 INPPL1O15357 1258 aa10.67□□□□□ -0.7
C2CD3-220ENST00000544293 POMCP01189 267 aa10.67□□□□□ -0.7
C2CD3-220ENST00000544293 SOD2P04179 222 aa10.67□□□□□ -0.7
C2CD3-220ENST00000544293 LAMP2P13473 410 aa10.67□□□□□ -0.7
C2CD3-220ENST00000544293 TGM1P22735 817 aa10.67□□□□□ -0.7
C2CD3-220ENST00000544293 STARD6P59095 220 aa10.67□□□□□ -0.7
C2CD3-220ENST00000544293 HTR4Q13639 388 aa10.67□□□□□ -0.7
C2CD3-220ENST00000544293 NTRK3Q16288 839 aa10.67□□□□□ -0.7
C2CD3-220ENST00000544293 TSGA10IPQ3SY00 556 aa10.67□□□□□ -0.7
C2CD3-220ENST00000544293 MTERF2Q49AM1 385 aa10.67□□□□□ -0.7
C2CD3-220ENST00000544293 DHX32Q7L7V1 743 aaKnown RBP10.67□□□□□ -0.7
C2CD3-220ENST00000544293 GSTCDQ8NEC7 633 aa10.67□□□□□ -0.7
C2CD3-220ENST00000544293 RSPH1Q8WYR4 309 aa10.67□□□□□ -0.7
C2CD3-220ENST00000544293 RIT2Q99578 217 aa10.67□□□□□ -0.7
C2CD3-220ENST00000544293 TMEM175Q9BSA9 504 aa10.67□□□□□ -0.7
C2CD3-220ENST00000544293 EMILIN2Q9BXX0 1053 aa10.67□□□□□ -0.7
C2CD3-220ENST00000544293 NT5C3AQ9H0P0 336 aa10.67□□□□□ -0.7
C2CD3-220ENST00000544293 SLC2A4RGQ9NR83 387 aa10.67□□□□□ -0.7
C2CD3-220ENST00000544293 MRPL17Q9NRX2 175 aaKnown RBP10.67□□□□□ -0.7
C2CD3-220ENST00000544293 AGPAT5Q9NUQ2 364 aa10.67□□□□□ -0.7
C2CD3-220ENST00000544293 SUCLA2Q9P2R7 463 aaPredicted RBP10.67□□□□□ -0.7
C2CD3-220ENST00000544293 CIZ1Q9ULV3 898 aaPredicted RBP10.67□□□□□ -0.7
C2CD3-220ENST00000544293 PIN4Q9Y237 131 aaKnown RBP10.67□□□□□ -0.7
C2CD3-220ENST00000544293 FAN1Q9Y2M0 1017 aa10.67□□□□□ -0.7
C2CD3-220ENST00000544293 SIT1Q9Y3P8 196 aa10.67□□□□□ -0.7
C2CD3-220ENST00000544293 FARP1Q9Y4F1 1045 aaPredicted RBP10.67□□□□□ -0.7
C2CD3-220ENST00000544293 SPTBN2O15020 2390 aa10.67□□□□□ -0.7
C2CD3-220ENST00000544293 CLUHO75153 1309 aa10.66□□□□□ -0.7
C2CD3-220ENST00000544293 GOLGA8AA7E2F4 631 aa10.66□□□□□ -0.7
C2CD3-220ENST00000544293 GOLGA8BA8MQT2 603 aa10.66□□□□□ -0.7
C2CD3-220ENST00000544293 PRPF3O43395 683 aaKnown RBP10.66□□□□□ -0.7
C2CD3-220ENST00000544293 CHMP2AO43633 222 aa10.66□□□□□ -0.7
C2CD3-220ENST00000544293 GBP2P32456 591 aaPredicted RBP10.66□□□□□ -0.7
C2CD3-220ENST00000544293 ATXN1P54253 815 aaKnown RBP10.66□□□□□ -0.7
C2CD3-220ENST00000544293 GPC5P78333 572 aa10.66□□□□□ -0.7
C2CD3-220ENST00000544293 CDC42EP1Q00587 391 aa10.66□□□□□ -0.7
C2CD3-220ENST00000544293 DSG1Q02413 1049 aa10.66□□□□□ -0.7
C2CD3-220ENST00000544293 DSC1Q08554 894 aa10.66□□□□□ -0.7
C2CD3-220ENST00000544293 RSPO4Q2I0M5 234 aaPredicted RBP10.66□□□□□ -0.7
C2CD3-220ENST00000544293 XKR3Q5GH77 459 aa10.66□□□□□ -0.7
C2CD3-220ENST00000544293 SYNE3Q6ZMZ3 975 aa10.66□□□□□ -0.7
C2CD3-220ENST00000544293 ZNF410Q86VK4 478 aa10.66□□□□□ -0.7
C2CD3-220ENST00000544293 RHPN2Q8IUC4 686 aa10.66□□□□□ -0.7
C2CD3-220ENST00000544293 TMEM87AQ8NBN3 555 aa10.66□□□□□ -0.7
C2CD3-220ENST00000544293 RUBCNQ92622 972 aa10.66□□□□□ -0.7
C2CD3-220ENST00000544293 CCDC136Q96JN2 1154 aa10.66□□□□□ -0.7
C2CD3-220ENST00000544293 B3GALT6Q96L58 329 aa10.66□□□□□ -0.7
C2CD3-220ENST00000544293 DDX23Q9BUQ8 820 aaKnown RBP10.66□□□□□ -0.7
C2CD3-220ENST00000544293 HERC2P3Q9BVR0 1158 aa10.66□□□□□ -0.7
C2CD3-220ENST00000544293 ARHGEF3Q9NR81 526 aa10.66□□□□□ -0.7
C2CD3-220ENST00000544293 WRAP73Q9P2S5 460 aaPredicted RBP10.66□□□□□ -0.7
C2CD3-220ENST00000544293 NUMBLQ9Y6R0 609 aa10.66□□□□□ -0.7
C2CD3-220ENST00000544293 KLF18A0A0U1RQI7 1052 aa10.65□□□□□ -0.7
C2CD3-220ENST00000544293 EML1O00423 815 aa10.65□□□□□ -0.7
C2CD3-220ENST00000544293 STK25O00506 426 aa10.65□□□□□ -0.7
C2CD3-220ENST00000544293 TGM5O43548 720 aa10.65□□□□□ -0.7
C2CD3-220ENST00000544293 SKIP12755 728 aa10.65□□□□□ -0.7
C2CD3-220ENST00000544293 CPA1P15085 419 aa10.65□□□□□ -0.7
C2CD3-220ENST00000544293 SFPQP23246 707 aaKnown RBP eCLIP10.65□□□□□ -0.7
C2CD3-220ENST00000544293 USP11P51784 963 aa10.65□□□□□ -0.7
C2CD3-220ENST00000544293 AK2P54819 239 aa10.65□□□□□ -0.7
C2CD3-220ENST00000544293 NPEPPSP55786 919 aa10.65□□□□□ -0.7
C2CD3-220ENST00000544293 RNASELQ05823 741 aaKnown RBP10.65□□□□□ -0.7
C2CD3-220ENST00000544293 FZD5Q13467 585 aa10.65□□□□□ -0.7
C2CD3-220ENST00000544293 DCLRE1AQ6PJP8 1040 aa10.65□□□□□ -0.7
C2CD3-220ENST00000544293 PARM1Q6UWI2 310 aa10.65□□□□□ -0.7
C2CD3-220ENST00000544293 CYP26C1Q6V0L0 522 aa10.65□□□□□ -0.7
C2CD3-220ENST00000544293 CATSPER4Q7RTX7 472 aa10.65□□□□□ -0.7
C2CD3-220ENST00000544293 REXO1Q8N1G1 1221 aaKnown RBP10.65□□□□□ -0.7
C2CD3-220ENST00000544293 SMG7Q92540 1137 aaKnown RBP10.65□□□□□ -0.7
C2CD3-220ENST00000544293 NELL1Q92832 810 aa10.65□□□□□ -0.7
C2CD3-220ENST00000544293 FGF14Q92915 247 aa10.65□□□□□ -0.7
C2CD3-220ENST00000544293 NXPE3Q969Y0 559 aa10.65□□□□□ -0.7
C2CD3-220ENST00000544293 MBOAT7Q96N66 472 aa10.65□□□□□ -0.7
C2CD3-220ENST00000544293 SCLT1Q96NL6 688 aa10.65□□□□□ -0.7
C2CD3-220ENST00000544293 GPR62Q9BZJ7 368 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms