RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 SPDYE4A6NLX3 237 aa25.3■■□□□ 1.64
CDKN3-207ENST00000543789 B4GALT3O60512 393 aa25.3■■□□□ 1.64
CDKN3-207ENST00000543789 DDHD2O94830 711 aa25.3■■□□□ 1.64
CDKN3-207ENST00000543789 KLRC2P26717 231 aa25.3■■□□□ 1.64
CDKN3-207ENST00000543789 GPR149Q86SP6 731 aa25.3■■□□□ 1.64
CDKN3-207ENST00000543789 TMEM105Q8N8V8 129 aa25.3■■□□□ 1.64
CDKN3-207ENST00000543789 PSPC1Q8WXF1 523 aaKnown RBP25.3■■□□□ 1.64
CDKN3-207ENST00000543789 TMEM143Q96AN5 459 aa25.3■■□□□ 1.64
CDKN3-207ENST00000543789 ACSF2Q96CM8 615 aaPredicted RBP25.3■■□□□ 1.64
CDKN3-207ENST00000543789 TMEM175Q9BSA9 504 aa25.3■■□□□ 1.64
CDKN3-207ENST00000543789 DHX33Q9H6R0 707 aaKnown RBP25.3■■□□□ 1.64
CDKN3-207ENST00000543789 SFXN1Q9H9B4 322 aa25.3■■□□□ 1.64
CDKN3-207ENST00000543789 RSAD1Q9HA92 442 aa25.3■■□□□ 1.64
CDKN3-207ENST00000543789 KCNMB3Q9NPA1 279 aa25.3■■□□□ 1.64
CDKN3-207ENST00000543789 KCNJ14Q9UNX9 436 aa25.3■■□□□ 1.64
CDKN3-207ENST00000543789 FAN1Q9Y2M0 1017 aa25.3■■□□□ 1.64
CDKN3-207ENST00000543789 EPB41L2O43491 1005 aaKnown RBP25.29■■□□□ 1.64
CDKN3-207ENST00000543789 HOXA11P31270 313 aaPredicted RBP25.29■■□□□ 1.64
CDKN3-207ENST00000543789 STK3Q13188 491 aa25.29■■□□□ 1.64
CDKN3-207ENST00000543789 ASTLQ6HA08 431 aaPredicted RBP25.29■■□□□ 1.64
CDKN3-207ENST00000543789 PPP4R3AQ6IN85 833 aa25.29■■□□□ 1.64
CDKN3-207ENST00000543789 MINDY3Q9H8M7 445 aa25.29■■□□□ 1.64
CDKN3-207ENST00000543789 CCDC194A0A1B0GVG4 234 aa25.28■■□□□ 1.64
CDKN3-207ENST00000543789 LILRB3O75022 631 aa25.28■■□□□ 1.64
CDKN3-207ENST00000543789 SSBP05455 408 aaKnown RBP eCLIP25.28■■□□□ 1.64
CDKN3-207ENST00000543789 CNPP09543 421 aaKnown RBP25.28■■□□□ 1.64
CDKN3-207ENST00000543789 RFC5P40937 340 aa25.28■■□□□ 1.64
CDKN3-207ENST00000543789 CLCN4P51793 760 aa25.28■■□□□ 1.64
CDKN3-207ENST00000543789 AFF1P51825 1210 aaKnown RBP25.28■■□□□ 1.64
CDKN3-207ENST00000543789 LAMTOR4Q0VGL1 99 aa25.28■■□□□ 1.64
CDKN3-207ENST00000543789 OTOP3Q7RTS5 596 aa25.28■■□□□ 1.64
CDKN3-207ENST00000543789 MFSD1Q9H3U5 465 aa25.28■■□□□ 1.64
CDKN3-207ENST00000543789 MRPL17Q9NRX2 175 aaKnown RBP25.28■■□□□ 1.64
CDKN3-207ENST00000543789 WRAP73Q9P2S5 460 aaPredicted RBP25.28■■□□□ 1.64
CDKN3-207ENST00000543789 CNTNAP2Q9UHC6 1331 aa25.28■■□□□ 1.64
CDKN3-207ENST00000543789 USP34Q70CQ2 3546 aa25.28■■□□□ 1.64
CDKN3-207ENST00000543789 ASAP2O43150 1006 aa25.27■■□□□ 1.64
CDKN3-207ENST00000543789 POMCP01189 267 aa25.27■■□□□ 1.64
CDKN3-207ENST00000543789 GCFC2P16383 781 aaKnown RBP25.27■■□□□ 1.64
CDKN3-207ENST00000543789 EPHA7Q15375 998 aa25.27■■□□□ 1.64
CDKN3-207ENST00000543789 UBXN11Q5T124 520 aa25.27■■□□□ 1.64
CDKN3-207ENST00000543789 CCDC149Q6ZUS6 474 aa25.27■■□□□ 1.64
CDKN3-207ENST00000543789 OTUD6AQ7L8S5 288 aa25.27■■□□□ 1.64
CDKN3-207ENST00000543789 NEK8Q86SG6 692 aa25.27■■□□□ 1.64
CDKN3-207ENST00000543789 C4orf19Q8IY42 314 aa25.27■■□□□ 1.64
CDKN3-207ENST00000543789 FEZF2Q8TBJ5 459 aa25.27■■□□□ 1.64
CDKN3-207ENST00000543789 TCP11Q8WWU5 503 aa25.27■■□□□ 1.64
CDKN3-207ENST00000543789 TM6SF1Q9BZW5 370 aa25.27■■□□□ 1.64
CDKN3-207ENST00000543789 UBN1Q9NPG3 1134 aa25.27■■□□□ 1.64
CDKN3-207ENST00000543789 CACNA1HO95180 2353 aa25.27■■□□□ 1.64
CDKN3-207ENST00000543789 KMT2EQ8IZD2 1858 aa25.26■■□□□ 1.63
CDKN3-207ENST00000543789 PROB1E7EW31 1015 aa25.26■■□□□ 1.63
CDKN3-207ENST00000543789 NRP1O14786 923 aa25.26■■□□□ 1.63
CDKN3-207ENST00000543789 MARCH6O60337 910 aa25.26■■□□□ 1.63
CDKN3-207ENST00000543789 NCLP19338 710 aaKnown RBP25.26■■□□□ 1.63
CDKN3-207ENST00000543789 YWHABP31946 246 aaKnown RBP25.26■■□□□ 1.63
CDKN3-207ENST00000543789 CLCN5P51795 746 aa25.26■■□□□ 1.63
CDKN3-207ENST00000543789 RNF149Q8NC42 400 aa25.26■■□□□ 1.63
CDKN3-207ENST00000543789 CNNM3Q8NE01 707 aa25.26■■□□□ 1.63
CDKN3-207ENST00000543789 PHF20Q9BVI0 1012 aa25.26■■□□□ 1.63
CDKN3-207ENST00000543789 TBX3O15119 743 aa25.25■■□□□ 1.63
CDKN3-207ENST00000543789 GAS2O43903 313 aaKnown RBP25.25■■□□□ 1.63
CDKN3-207ENST00000543789 CCNT1O60563 726 aaKnown RBP25.25■■□□□ 1.63
CDKN3-207ENST00000543789 FERMT3Q86UX7 667 aa25.25■■□□□ 1.63
CDKN3-207ENST00000543789 HAS1Q92839 578 aa25.25■■□□□ 1.63
CDKN3-207ENST00000543789 NAP1L4Q99733 375 aaKnown RBP25.25■■□□□ 1.63
CDKN3-207ENST00000543789 LXNQ9BS40 222 aa25.25■■□□□ 1.63
CDKN3-207ENST00000543789 BMP2KQ9NSY1 1161 aaPredicted RBP25.25■■□□□ 1.63
CDKN3-207ENST00000543789 PDRG1Q9NUG6 133 aa25.25■■□□□ 1.63
CDKN3-207ENST00000543789 RGL1Q9NZL6 768 aa25.25■■□□□ 1.63
CDKN3-207ENST00000543789 SSX2IPQ9Y2D8 614 aa25.25■■□□□ 1.63
CDKN3-207ENST00000543789 CDKL5O76039 1030 aa25.24■■□□□ 1.63
CDKN3-207ENST00000543789 SOD2P04179 222 aa25.24■■□□□ 1.63
CDKN3-207ENST00000543789 ITGA4P13612 1032 aa25.24■■□□□ 1.63
CDKN3-207ENST00000543789 XBP1P17861 261 aa25.24■■□□□ 1.63
CDKN3-207ENST00000543789 TDGQ13569 410 aa25.24■■□□□ 1.63
CDKN3-207ENST00000543789 EMC2Q15006 297 aa25.24■■□□□ 1.63
CDKN3-207ENST00000543789 C15orf39Q6ZRI6 1047 aa25.24■■□□□ 1.63
CDKN3-207ENST00000543789 ZSWIM4Q9H7M6 989 aa25.24■■□□□ 1.63
CDKN3-207ENST00000543789 C2CD2LO14523 706 aa25.23■■□□□ 1.63
CDKN3-207ENST00000543789 ERLIN2O94905 339 aa25.23■■□□□ 1.63
CDKN3-207ENST00000543789 URODP06132 367 aa25.23■■□□□ 1.63
CDKN3-207ENST00000543789 AK2P54819 239 aa25.23■■□□□ 1.63
CDKN3-207ENST00000543789 PCBP1Q15365 356 aaKnown RBP eCLIP25.23■■□□□ 1.63
CDKN3-207ENST00000543789 XKR9Q5GH70 373 aa25.23■■□□□ 1.63
CDKN3-207ENST00000543789 PIK3AP1Q6ZUJ8 805 aa25.23■■□□□ 1.63
CDKN3-207ENST00000543789 SMG8Q8ND04 991 aaKnown RBP25.23■■□□□ 1.63
CDKN3-207ENST00000543789 DYDC2Q96IM9 177 aa25.23■■□□□ 1.63
CDKN3-207ENST00000543789 RPS6KC1Q96S38 1066 aa25.23■■□□□ 1.63
CDKN3-207ENST00000543789 PRG3Q9Y2Y8 225 aaPredicted RBP25.23■■□□□ 1.63
CDKN3-207ENST00000543789 ZFHX2Q9C0A1 2572 aaPredicted RBP25.23■■□□□ 1.63
CDKN3-207ENST00000543789 AXLP30530 894 aa25.22■■□□□ 1.63
CDKN3-207ENST00000543789 NCBP1Q09161 790 aaKnown RBP25.22■■□□□ 1.63
CDKN3-207ENST00000543789 CTTNQ14247 550 aaKnown RBP25.22■■□□□ 1.63
CDKN3-207ENST00000543789 NCAPH2Q6IBW4 605 aa25.22■■□□□ 1.63
CDKN3-207ENST00000543789 TAS1R1Q7RTX1 841 aa25.22■■□□□ 1.63
CDKN3-207ENST00000543789 COLGALT2Q8IYK4 626 aa25.22■■□□□ 1.63
CDKN3-207ENST00000543789 FLCNQ8NFG4 579 aa25.22■■□□□ 1.63
CDKN3-207ENST00000543789 CMASQ8NFW8 434 aaPredicted RBP25.22■■□□□ 1.63
CDKN3-207ENST00000543789 MTRQ99707 1265 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms