RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 FAM193BQ96PV7 902 aaPredicted RBP14.61□□□□□ -0.07
RTN3-213ENST00000543552 HSD17B14Q9BPX1 270 aa14.61□□□□□ -0.07
RTN3-213ENST00000543552 KCNH6Q9H252 994 aa14.61□□□□□ -0.07
RTN3-213ENST00000543552 RSAD1Q9HA92 442 aa14.61□□□□□ -0.07
RTN3-213ENST00000543552 LIMCH1Q9UPQ0 1083 aa14.61□□□□□ -0.07
RTN3-213ENST00000543552 NT5C1B-RDH14C9J2C7 533 aa14.6□□□□□ -0.07
RTN3-213ENST00000543552 JAK2O60674 1132 aa14.6□□□□□ -0.07
RTN3-213ENST00000543552 OFD1O75665 1012 aa14.6□□□□□ -0.07
RTN3-213ENST00000543552 CXCL14O95715 111 aa14.6□□□□□ -0.07
RTN3-213ENST00000543552 TXKP42681 527 aa14.6□□□□□ -0.07
RTN3-213ENST00000543552 RBM10P98175 930 aaKnown RBP14.6□□□□□ -0.07
RTN3-213ENST00000543552 ITIH3Q06033 890 aa14.6□□□□□ -0.07
RTN3-213ENST00000543552 ORC2Q13416 577 aaPredicted RBP14.6□□□□□ -0.07
RTN3-213ENST00000543552 LONRF3Q496Y0 759 aa14.6□□□□□ -0.07
RTN3-213ENST00000543552 PPFIBP1Q86W92 1011 aa14.6□□□□□ -0.07
RTN3-213ENST00000543552 EDAQ92838 391 aa14.6□□□□□ -0.07
RTN3-213ENST00000543552 RPGRIP1Q96KN7 1286 aa14.6□□□□□ -0.07
RTN3-213ENST00000543552 LLPHQ9BRT6 129 aaKnown RBP14.6□□□□□ -0.07
RTN3-213ENST00000543552 TMEM175Q9BSA9 504 aa14.6□□□□□ -0.07
RTN3-213ENST00000543552 GBP3Q9H0R5 595 aa14.6□□□□□ -0.07
RTN3-213ENST00000543552 ZBP1Q9H171 429 aa14.6□□□□□ -0.07
RTN3-213ENST00000543552 NRDE2Q9H7Z3 1164 aa14.6□□□□□ -0.07
RTN3-213ENST00000543552 MINDY3Q9H8M7 445 aa14.6□□□□□ -0.07
RTN3-213ENST00000543552 NR2E1Q9Y466 385 aa14.6□□□□□ -0.07
RTN3-213ENST00000543552 HCFC2Q9Y5Z7 792 aa14.6□□□□□ -0.07
RTN3-213ENST00000543552 IRAK3Q9Y616 596 aa14.6□□□□□ -0.07
RTN3-213ENST00000543552 INO80B-WBP1J3KQ70 363 aa14.59□□□□□ -0.07
RTN3-213ENST00000543552 DTNBO60941 627 aa14.59□□□□□ -0.07
RTN3-213ENST00000543552 GALTP07902 379 aa14.59□□□□□ -0.07
RTN3-213ENST00000543552 CTSAP10619 480 aa14.59□□□□□ -0.07
RTN3-213ENST00000543552 XRCC6P12956 609 aaKnown RBP eCLIP14.59□□□□□ -0.07
RTN3-213ENST00000543552 ITGA4P13612 1032 aa14.59□□□□□ -0.07
RTN3-213ENST00000543552 NCLP19338 710 aaKnown RBP14.59□□□□□ -0.07
RTN3-213ENST00000543552 HOXA11P31270 313 aaPredicted RBP14.59□□□□□ -0.07
RTN3-213ENST00000543552 FOSBP53539 338 aa14.59□□□□□ -0.07
RTN3-213ENST00000543552 PTENP60484 403 aa14.59□□□□□ -0.07
RTN3-213ENST00000543552 IFNLR1Q8IU57 520 aaPredicted RBP14.59□□□□□ -0.07
RTN3-213ENST00000543552 ERMNQ8TAM6 284 aa14.59□□□□□ -0.07
RTN3-213ENST00000543552 C8orf76Q96K31 380 aa14.59□□□□□ -0.07
RTN3-213ENST00000543552 RIPOR3Q96MK2 946 aa14.59□□□□□ -0.07
RTN3-213ENST00000543552 MTMR9Q96QG7 549 aa14.59□□□□□ -0.07
RTN3-213ENST00000543552 NFKBIZQ9BYH8 718 aa14.59□□□□□ -0.07
RTN3-213ENST00000543552 TRIM6Q9C030 488 aaPredicted RBP14.59□□□□□ -0.07
RTN3-213ENST00000543552 S1PR5Q9H228 398 aa14.59□□□□□ -0.07
RTN3-213ENST00000543552 TSPAN1O60635 241 aa14.58□□□□□ -0.08
RTN3-213ENST00000543552 CLASP2O75122 1294 aaKnown RBP14.58□□□□□ -0.08
RTN3-213ENST00000543552 NR1I2O75469 434 aa14.58□□□□□ -0.08
RTN3-213ENST00000543552 ALDH2P05091 517 aa14.58□□□□□ -0.08
RTN3-213ENST00000543552 MTHFRP42898 656 aa14.58□□□□□ -0.08
RTN3-213ENST00000543552 RARRES1P49788 294 aa14.58□□□□□ -0.08
RTN3-213ENST00000543552 HMGN5P82970 282 aaKnown RBP14.58□□□□□ -0.08
RTN3-213ENST00000543552 GNL2Q13823 731 aaKnown RBP14.58□□□□□ -0.08
RTN3-213ENST00000543552 SYCE2Q6PIF2 218 aa14.58□□□□□ -0.08
RTN3-213ENST00000543552 ELMSAN1Q6PJG2 1045 aa14.58□□□□□ -0.08
RTN3-213ENST00000543552 AGMOQ6ZNB7 445 aa14.58□□□□□ -0.08
RTN3-213ENST00000543552 MCPH1Q8NEM0 835 aa14.58□□□□□ -0.08
RTN3-213ENST00000543552 ZSCAN31Q96LW9 406 aaPredicted RBP14.58□□□□□ -0.08
RTN3-213ENST00000543552 EMILIN2Q9BXX0 1053 aa14.58□□□□□ -0.08
RTN3-213ENST00000543552 ADAM7Q9H2U9 754 aa14.58□□□□□ -0.08
RTN3-213ENST00000543552 TUFT1Q9NNX1 390 aa14.58□□□□□ -0.08
RTN3-213ENST00000543552 XPNPEP1Q9NQW7 623 aa14.58□□□□□ -0.08
RTN3-213ENST00000543552 SSX2IPQ9Y2D8 614 aa14.58□□□□□ -0.08
RTN3-213ENST00000543552 MUC6Q6W4X9 2439 aa14.57□□□□□ -0.08
RTN3-213ENST00000543552 MEIS3P2A8K0S8 358 aa14.57□□□□□ -0.08
RTN3-213ENST00000543552 ZBTB39O15060 712 aa14.57□□□□□ -0.08
RTN3-213ENST00000543552 CENPBP07199 599 aaPredicted RBP14.57□□□□□ -0.08
RTN3-213ENST00000543552 MCM7P33993 719 aa14.57□□□□□ -0.08
RTN3-213ENST00000543552 ARL2P36404 184 aa14.57□□□□□ -0.08
RTN3-213ENST00000543552 SLC11A1P49279 550 aa14.57□□□□□ -0.08
RTN3-213ENST00000543552 RBM25P49756 843 aaKnown RBP14.57□□□□□ -0.08
RTN3-213ENST00000543552 CAPSQ13938 189 aa14.57□□□□□ -0.08
RTN3-213ENST00000543552 UBXN11Q5T124 520 aa14.57□□□□□ -0.08
RTN3-213ENST00000543552 HFE2Q6ZVN8 426 aa14.57□□□□□ -0.08
RTN3-213ENST00000543552 TMEM173Q86WV6 379 aaPredicted RBP14.57□□□□□ -0.08
RTN3-213ENST00000543552 CSRNP2Q9H175 543 aa14.57□□□□□ -0.08
RTN3-213ENST00000543552 FOXP1Q9H334 677 aaPredicted RBP14.57□□□□□ -0.08
RTN3-213ENST00000543552 SH2B1Q9NRF2 756 aaPredicted RBP14.57□□□□□ -0.08
RTN3-213ENST00000543552 DNAJB4Q9UDY4 337 aa14.57□□□□□ -0.08
RTN3-213ENST00000543552 FAN1Q9Y2M0 1017 aa14.57□□□□□ -0.08
RTN3-213ENST00000543552 IPPQ9Y573 584 aa14.57□□□□□ -0.08
RTN3-213ENST00000543552 ZMYM2Q9UBW7 1377 aa14.57□□□□□ -0.08
RTN3-213ENST00000543552 POTEMA6NI47 508 aa14.56□□□□□ -0.08
RTN3-213ENST00000543552 SPDYE4A6NLX3 237 aa14.56□□□□□ -0.08
RTN3-213ENST00000543552 USO1O60763 962 aaKnown RBP14.56□□□□□ -0.08
RTN3-213ENST00000543552 POMCP01189 267 aa14.56□□□□□ -0.08
RTN3-213ENST00000543552 ATP2B1P20020 1258 aa14.56□□□□□ -0.08
RTN3-213ENST00000543552 TRAPPC10P48553 1259 aa14.56□□□□□ -0.08
RTN3-213ENST00000543552 ZXDAP98168 799 aa14.56□□□□□ -0.08
RTN3-213ENST00000543552 GUCY1B3Q02153 619 aa14.56□□□□□ -0.08
RTN3-213ENST00000543552 MBTD1Q05BQ5 628 aa14.56□□□□□ -0.08
RTN3-213ENST00000543552 HAUS3Q68CZ6 603 aa14.56□□□□□ -0.08
RTN3-213ENST00000543552 TRIM67Q6ZTA4 783 aa14.56□□□□□ -0.08
RTN3-213ENST00000543552 BMP8AQ7Z5Y6 402 aa14.56□□□□□ -0.08
RTN3-213ENST00000543552 ZBTB33Q86T24 672 aa14.56□□□□□ -0.08
RTN3-213ENST00000543552 CABP7Q86V35 215 aa14.56□□□□□ -0.08
RTN3-213ENST00000543552 ZNF280BQ86YH2 543 aa14.56□□□□□ -0.08
RTN3-213ENST00000543552 CCDC83Q8IWF9 413 aa14.56□□□□□ -0.08
RTN3-213ENST00000543552 ZBTB8OSQ8IWT0 167 aa14.56□□□□□ -0.08
RTN3-213ENST00000543552 SUGP1Q8IWZ8 645 aaKnown RBP14.56□□□□□ -0.08
RTN3-213ENST00000543552 FAM184AQ8NB25 1140 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms