RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 SEC31AO94979 1220 aaKnown RBP15.4■□□□□ 0.06
LDB3-207ENST00000542786 OATP04181 439 aa15.4■□□□□ 0.06
LDB3-207ENST00000542786 GCLMP48507 274 aa15.4■□□□□ 0.06
LDB3-207ENST00000542786 ITIH3Q06033 890 aa15.4■□□□□ 0.06
LDB3-207ENST00000542786 BMS1Q14692 1282 aaKnown RBP15.4■□□□□ 0.06
LDB3-207ENST00000542786 EMC2Q15006 297 aa15.4■□□□□ 0.06
LDB3-207ENST00000542786 TARBP2Q15633 366 aaKnown RBP15.4■□□□□ 0.06
LDB3-207ENST00000542786 NFRKBQ6P4R8 1299 aa15.4■□□□□ 0.06
LDB3-207ENST00000542786 ALKBH5Q6P6C2 394 aaKnown RBP15.4■□□□□ 0.06
LDB3-207ENST00000542786 TMCO3Q6UWJ1 677 aa15.4■□□□□ 0.06
LDB3-207ENST00000542786 NCAPG2Q86XI2 1143 aa15.4■□□□□ 0.06
LDB3-207ENST00000542786 ARHGEF19Q8IW93 802 aa15.4■□□□□ 0.06
LDB3-207ENST00000542786 RPGRIP1Q96KN7 1286 aa15.4■□□□□ 0.06
LDB3-207ENST00000542786 TMEM117Q9H0C3 514 aa15.4■□□□□ 0.06
LDB3-207ENST00000542786 ZNF302Q9NR11 478 aa15.4■□□□□ 0.06
LDB3-207ENST00000542786 HYOU1Q9Y4L1 999 aa15.4■□□□□ 0.06
LDB3-207ENST00000542786 MYH9P35579 1960 aaKnown RBP15.4■□□□□ 0.06
LDB3-207ENST00000542786 GOLGA8IPA6NC78 632 aa15.4■□□□□ 0.06
LDB3-207ENST00000542786 GOLGA8JA6NMD2 632 aa15.4■□□□□ 0.06
LDB3-207ENST00000542786 TBC1D8O95759 1140 aa15.4■□□□□ 0.06
LDB3-207ENST00000542786 ENPEPQ07075 957 aa15.4■□□□□ 0.06
LDB3-207ENST00000542786 SNRNP35Q16560 246 aaKnown RBP15.4■□□□□ 0.06
LDB3-207ENST00000542786 TMC2Q8TDI7 906 aa15.4■□□□□ 0.06
LDB3-207ENST00000542786 HNRNPLLQ8WVV9 542 aaKnown RBP15.4■□□□□ 0.06
LDB3-207ENST00000542786 CAPZA3Q96KX2 299 aa15.4■□□□□ 0.06
LDB3-207ENST00000542786 PAGR1Q9BTK6 254 aa15.4■□□□□ 0.06
LDB3-207ENST00000542786 INTUQ9ULD6 942 aa15.4■□□□□ 0.06
LDB3-207ENST00000542786 COQ4Q9Y3A0 265 aa15.4■□□□□ 0.06
LDB3-207ENST00000542786 PALMO75781 387 aa15.39■□□□□ 0.05
LDB3-207ENST00000542786 SLC25A27O95847 323 aa15.39■□□□□ 0.05
LDB3-207ENST00000542786 TCP1P17987 556 aaKnown RBP15.39■□□□□ 0.05
LDB3-207ENST00000542786 NF2P35240 595 aa15.39■□□□□ 0.05
LDB3-207ENST00000542786 ARL2P36404 184 aa15.39■□□□□ 0.05
LDB3-207ENST00000542786 Q3C1V9 767 aa15.39■□□□□ 0.05
LDB3-207ENST00000542786 MTERF2Q49AM1 385 aa15.39■□□□□ 0.05
LDB3-207ENST00000542786 LRRC57Q8N9N7 239 aa15.39■□□□□ 0.05
LDB3-207ENST00000542786 ASAP3Q8TDY4 903 aa15.39■□□□□ 0.05
LDB3-207ENST00000542786 PARD3BQ8TEW8 1205 aa15.39■□□□□ 0.05
LDB3-207ENST00000542786 OPTNQ96CV9 577 aa15.39■□□□□ 0.05
LDB3-207ENST00000542786 SAAL1Q96ER3 474 aa15.39■□□□□ 0.05
LDB3-207ENST00000542786 PORCNQ9H237 461 aa15.39■□□□□ 0.05
LDB3-207ENST00000542786 LRRIQ3A6PVS8 624 aaPredicted RBP15.38■□□□□ 0.05
LDB3-207ENST00000542786 FOXN3O00409 490 aaPredicted RBP15.38■□□□□ 0.05
LDB3-207ENST00000542786 ATP8B1O43520 1251 aa15.38■□□□□ 0.05
LDB3-207ENST00000542786 SASH3O75995 380 aa15.38■□□□□ 0.05
LDB3-207ENST00000542786 RHOXF2BP0C7M4 288 aa15.38■□□□□ 0.05
LDB3-207ENST00000542786 ZBTB48P10074 688 aaPredicted RBP15.38■□□□□ 0.05
LDB3-207ENST00000542786 GARTP22102 1010 aa15.38■□□□□ 0.05
LDB3-207ENST00000542786 BRDTQ58F21 947 aaPredicted RBP15.38■□□□□ 0.05
LDB3-207ENST00000542786 MEI1Q5TIA1 1274 aa15.38■□□□□ 0.05
LDB3-207ENST00000542786 WDR93Q6P2C0 686 aa15.38■□□□□ 0.05
LDB3-207ENST00000542786 DNAAF5Q86Y56 855 aa15.38■□□□□ 0.05
LDB3-207ENST00000542786 MORC4Q8TE76 937 aa15.38■□□□□ 0.05
LDB3-207ENST00000542786 AFAP1L1Q8TED9 768 aa15.38■□□□□ 0.05
LDB3-207ENST00000542786 SEMA4DQ92854 862 aa15.38■□□□□ 0.05
LDB3-207ENST00000542786 RHOXF2Q9BQY4 288 aa15.38■□□□□ 0.05
LDB3-207ENST00000542786 STYXL1Q9Y6J8 313 aa15.38■□□□□ 0.05
LDB3-207ENST00000542786 NCANO14594 1321 aa15.38■□□□□ 0.05
LDB3-207ENST00000542786 A0A0A6YYK5 440 aaPredicted RBP15.37■□□□□ 0.05
LDB3-207ENST00000542786 ARIH2O95376 493 aa15.37■□□□□ 0.05
LDB3-207ENST00000542786 PIGRP01833 764 aa15.37■□□□□ 0.05
LDB3-207ENST00000542786 TGFB3P10600 412 aa15.37■□□□□ 0.05
LDB3-207ENST00000542786 GLRA2P23416 452 aa15.37■□□□□ 0.05
LDB3-207ENST00000542786 COPB2P35606 906 aa15.37■□□□□ 0.05
LDB3-207ENST00000542786 MXI1P50539 228 aa15.37■□□□□ 0.05
LDB3-207ENST00000542786 VSNL1P62760 191 aa15.37■□□□□ 0.05
LDB3-207ENST00000542786 CYP24A1Q07973 514 aa15.37■□□□□ 0.05
LDB3-207ENST00000542786 UBXN6Q9BZV1 441 aa15.37■□□□□ 0.05
LDB3-207ENST00000542786 TSKSQ9UJT2 592 aa15.37■□□□□ 0.05
LDB3-207ENST00000542786 SCN4AP35499 1836 aa15.37■□□□□ 0.05
LDB3-207ENST00000542786 BEND6Q5SZJ8 279 aaPredicted RBP15.37■□□□□ 0.05
LDB3-207ENST00000542786 DPY19L2Q6NUT2 758 aa15.37■□□□□ 0.05
LDB3-207ENST00000542786 METTL7BQ6UX53 244 aa15.37■□□□□ 0.05
LDB3-207ENST00000542786 FMNL3Q8IVF7 1028 aa15.37■□□□□ 0.05
LDB3-207ENST00000542786 MMGT1Q8N4V1 131 aa15.37■□□□□ 0.05
LDB3-207ENST00000542786 U2AF1L4Q8WU68 220 aaKnown RBP15.37■□□□□ 0.05
LDB3-207ENST00000542786 VTI1AQ96AJ9 217 aa15.37■□□□□ 0.05
LDB3-207ENST00000542786 KREMEN1Q96MU8 473 aa15.37■□□□□ 0.05
LDB3-207ENST00000542786 FUT8Q9BYC5 575 aa15.37■□□□□ 0.05
LDB3-207ENST00000542786 TAF1DQ9H5J8 278 aaPredicted RBP15.37■□□□□ 0.05
LDB3-207ENST00000542786 TARSL2A2RTX5 802 aaKnown RBP15.36■□□□□ 0.05
LDB3-207ENST00000542786 H0YCG3 227 aa15.36■□□□□ 0.05
LDB3-207ENST00000542786 LGR5O75473 907 aa15.36■□□□□ 0.05
LDB3-207ENST00000542786 FTCDO95954 541 aa15.36■□□□□ 0.05
LDB3-207ENST00000542786 PGK2P07205 417 aa15.36■□□□□ 0.05
LDB3-207ENST00000542786 H2AFZP0C0S5 128 aa15.36■□□□□ 0.05
LDB3-207ENST00000542786 GTF2H1P32780 548 aa15.36■□□□□ 0.05
LDB3-207ENST00000542786 PLA2G4AP47712 749 aa15.36■□□□□ 0.05
LDB3-207ENST00000542786 POLGP54098 1239 aaPredicted RBP15.36■□□□□ 0.05
LDB3-207ENST00000542786 CBX1P83916 185 aa15.36■□□□□ 0.05
LDB3-207ENST00000542786 NEDD9Q14511 834 aa15.36■□□□□ 0.05
LDB3-207ENST00000542786 LONRF2Q1L5Z9 754 aa15.36■□□□□ 0.05
LDB3-207ENST00000542786 C15orf39Q6ZRI6 1047 aa15.36■□□□□ 0.05
LDB3-207ENST00000542786 H2AFVQ71UI9 128 aa15.36■□□□□ 0.05
LDB3-207ENST00000542786 FASTKD5Q7L8L6 764 aaKnown RBP15.36■□□□□ 0.05
LDB3-207ENST00000542786 SLFN11Q7Z7L1 901 aa15.36■□□□□ 0.05
LDB3-207ENST00000542786 VPS36Q86VN1 386 aa15.36■□□□□ 0.05
LDB3-207ENST00000542786 GLYCTKQ8IVS8 523 aa15.36■□□□□ 0.05
LDB3-207ENST00000542786 KAT5Q92993 513 aa15.36■□□□□ 0.05
LDB3-207ENST00000542786 TMEM143Q96AN5 459 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms