RNA–Protein interactions for RNA: ENST00000542694.2

SPTB-205, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-205ENST00000542694 N4BP3O15049 544 aa17.15■□□□□ 0.34
SPTB-205ENST00000542694 TSPAN1O60635 241 aa17.15■□□□□ 0.34
SPTB-205ENST00000542694 KRT18P05783 430 aaKnown RBP17.15■□□□□ 0.34
SPTB-205ENST00000542694 CTNNB1P35222 781 aa17.15■□□□□ 0.34
SPTB-205ENST00000542694 NUCB2P80303 420 aa17.15■□□□□ 0.34
SPTB-205ENST00000542694 PRPF4BQ13523 1007 aaKnown RBP17.15■□□□□ 0.34
SPTB-205ENST00000542694 MRPL10Q7Z7H8 261 aaKnown RBP17.15■□□□□ 0.34
SPTB-205ENST00000542694 SPIRE2Q8WWL2 714 aa17.15■□□□□ 0.34
SPTB-205ENST00000542694 LARP4BQ92615 738 aaKnown RBP17.15■□□□□ 0.34
SPTB-205ENST00000542694 P2RX5Q93086 422 aa17.15■□□□□ 0.34
SPTB-205ENST00000542694 EPSTI1Q96J88 318 aa17.15■□□□□ 0.34
SPTB-205ENST00000542694 PYM1Q9BRP8 204 aaKnown RBP17.15■□□□□ 0.34
SPTB-205ENST00000542694 ADPGKQ9BRR6 497 aa17.15■□□□□ 0.34
SPTB-205ENST00000542694 RUSC1Q9BVN2 902 aa17.15■□□□□ 0.34
SPTB-205ENST00000542694 TMEM134Q9H6X4 195 aa17.15■□□□□ 0.34
SPTB-205ENST00000542694 KMT5AQ9NQR1 393 aa17.15■□□□□ 0.34
SPTB-205ENST00000542694 A0A1B0GUA9 196 aa17.14■□□□□ 0.33
SPTB-205ENST00000542694 PRKCBP05771 671 aa17.14■□□□□ 0.33
SPTB-205ENST00000542694 PLS3P13797 630 aa17.14■□□□□ 0.33
SPTB-205ENST00000542694 LAG3P18627 525 aa17.14■□□□□ 0.33
SPTB-205ENST00000542694 NCLP19338 710 aaKnown RBP17.14■□□□□ 0.33
SPTB-205ENST00000542694 PEX3P56589 373 aa17.14■□□□□ 0.33
SPTB-205ENST00000542694 KRT85P78386 507 aa17.14■□□□□ 0.33
SPTB-205ENST00000542694 GRIN1Q05586 938 aa17.14■□□□□ 0.33
SPTB-205ENST00000542694 GPM6BQ13491 265 aa17.14■□□□□ 0.33
SPTB-205ENST00000542694 PAN2Q504Q3 1202 aaKnown RBP17.14■□□□□ 0.33
SPTB-205ENST00000542694 SLC27A1Q6PCB7 646 aa17.14■□□□□ 0.33
SPTB-205ENST00000542694 SV2BQ7L1I2 683 aa17.14■□□□□ 0.33
SPTB-205ENST00000542694 GPBP1Q86WP2 473 aa17.14■□□□□ 0.33
SPTB-205ENST00000542694 LRRC43Q8N309 656 aa17.14■□□□□ 0.33
SPTB-205ENST00000542694 SLC17A8Q8NDX2 589 aa17.14■□□□□ 0.33
SPTB-205ENST00000542694 MAFAQ8NHW3 353 aaPredicted RBP17.14■□□□□ 0.33
SPTB-205ENST00000542694 URGCPQ8TCY9 931 aa17.14■□□□□ 0.33
SPTB-205ENST00000542694 CLIC6Q96NY7 704 aa17.14■□□□□ 0.33
SPTB-205ENST00000542694 C17orf80Q9BSJ5 609 aa17.14■□□□□ 0.33
SPTB-205ENST00000542694 LMAN2LQ9H0V9 348 aa17.14■□□□□ 0.33
SPTB-205ENST00000542694 MTUS1Q9ULD2 1270 aa17.14■□□□□ 0.33
SPTB-205ENST00000542694 ARHGEF15O94989 841 aa17.13■□□□□ 0.33
SPTB-205ENST00000542694 FGFR1P11362 822 aa17.13■□□□□ 0.33
SPTB-205ENST00000542694 ITGA4P13612 1032 aa17.13■□□□□ 0.33
SPTB-205ENST00000542694 ARF4P18085 180 aaPredicted RBP17.13■□□□□ 0.33
SPTB-205ENST00000542694 NPTX2P47972 431 aa17.13■□□□□ 0.33
SPTB-205ENST00000542694 ME1P48163 572 aa17.13■□□□□ 0.33
SPTB-205ENST00000542694 STRN3Q13033 797 aa17.13■□□□□ 0.33
SPTB-205ENST00000542694 CASD1Q96PB1 797 aa17.13■□□□□ 0.33
SPTB-205ENST00000542694 CUEDC2Q9H467 287 aa17.13■□□□□ 0.33
SPTB-205ENST00000542694 FAM13BQ9NYF5 915 aa17.13■□□□□ 0.33
SPTB-205ENST00000542694 RCOR1Q9UKL0 485 aa17.13■□□□□ 0.33
SPTB-205ENST00000542694 MRPL42Q9Y6G3 142 aaKnown RBP17.13■□□□□ 0.33
SPTB-205ENST00000542694 CHD7Q9P2D1 2997 aa17.13■□□□□ 0.33
SPTB-205ENST00000542694 TBCAO75347 108 aaKnown RBP17.12■□□□□ 0.33
SPTB-205ENST00000542694 FAM13AO94988 1023 aa17.12■□□□□ 0.33
SPTB-205ENST00000542694 PPM1AP35813 382 aa17.12■□□□□ 0.33
SPTB-205ENST00000542694 STAT6P42226 847 aa17.12■□□□□ 0.33
SPTB-205ENST00000542694 AMPD3Q01432 767 aa17.12■□□□□ 0.33
SPTB-205ENST00000542694 DHX8Q14562 1220 aaKnown RBP17.12■□□□□ 0.33
SPTB-205ENST00000542694 MCM6Q14566 821 aa17.12■□□□□ 0.33
SPTB-205ENST00000542694 AMHR2Q16671 573 aa17.12■□□□□ 0.33
SPTB-205ENST00000542694 NOMO2Q5JPE7 1267 aa17.12■□□□□ 0.33
SPTB-205ENST00000542694 SPECC1Q5M775 1068 aa17.12■□□□□ 0.33
SPTB-205ENST00000542694 IQUBQ8NA54 791 aa17.12■□□□□ 0.33
SPTB-205ENST00000542694 BSNDQ8WZ55 320 aa17.12■□□□□ 0.33
SPTB-205ENST00000542694 MRPL38Q96DV4 380 aaKnown RBP17.12■□□□□ 0.33
SPTB-205ENST00000542694 SCAND2PQ9GZW5 306 aaPredicted RBP17.12■□□□□ 0.33
SPTB-205ENST00000542694 PARVGQ9HBI0 331 aa17.12■□□□□ 0.33
SPTB-205ENST00000542694 BLOC1S4Q9NUP1 217 aa17.12■□□□□ 0.33
SPTB-205ENST00000542694 TYW1Q9NV66 732 aaKnown RBP17.12■□□□□ 0.33
SPTB-205ENST00000542694 PUF60Q9UHX1 559 aaKnown RBP17.12■□□□□ 0.33
SPTB-205ENST00000542694 MTCH2Q9Y6C9 303 aa17.12■□□□□ 0.33
SPTB-205ENST00000542694 ATF7P17544 494 aaPredicted RBP17.11■□□□□ 0.33
SPTB-205ENST00000542694 ALDH7A1P49419 539 aaKnown RBP17.11■□□□□ 0.33
SPTB-205ENST00000542694 KRT17Q04695 432 aa17.11■□□□□ 0.33
SPTB-205ENST00000542694 UBE3AQ05086 875 aa17.11■□□□□ 0.33
SPTB-205ENST00000542694 DNM1Q05193 864 aaKnown RBP17.11■□□□□ 0.33
SPTB-205ENST00000542694 RNASELQ05823 741 aaKnown RBP17.11■□□□□ 0.33
SPTB-205ENST00000542694 PKP1Q13835 747 aa17.11■□□□□ 0.33
SPTB-205ENST00000542694 ADGRE1Q14246 886 aa17.11■□□□□ 0.33
SPTB-205ENST00000542694 BMS1Q14692 1282 aaKnown RBP17.11■□□□□ 0.33
SPTB-205ENST00000542694 DCAF4L1Q3SXM0 396 aa17.11■□□□□ 0.33
SPTB-205ENST00000542694 FOXD4L6Q3SYB3 417 aaPredicted RBP17.11■□□□□ 0.33
SPTB-205ENST00000542694 ARSHQ5FYA8 562 aa17.11■□□□□ 0.33
SPTB-205ENST00000542694 FOXD4L3Q6VB84 417 aaPredicted RBP17.11■□□□□ 0.33
SPTB-205ENST00000542694 USP49Q70CQ1 688 aa17.11■□□□□ 0.33
SPTB-205ENST00000542694 DAW1Q8N136 415 aa17.11■□□□□ 0.33
SPTB-205ENST00000542694 CPB2Q96IY4 423 aa17.11■□□□□ 0.33
SPTB-205ENST00000542694 FAM193BQ96PV7 902 aaPredicted RBP17.11■□□□□ 0.33
SPTB-205ENST00000542694 MRPL4Q9BYD3 311 aaKnown RBP17.11■□□□□ 0.33
SPTB-205ENST00000542694 CCDC113Q9H0I3 377 aa17.11■□□□□ 0.33
SPTB-205ENST00000542694 RSAD1Q9HA92 442 aa17.11■□□□□ 0.33
SPTB-205ENST00000542694 ARHGAP28Q9P2N2 729 aa17.11■□□□□ 0.33
SPTB-205ENST00000542694 STK39Q9UEW8 545 aa17.11■□□□□ 0.33
SPTB-205ENST00000542694 GIT1Q9Y2X7 761 aa17.11■□□□□ 0.33
SPTB-205ENST00000542694 RALGAPA2Q2PPJ7 1873 aa17.11■□□□□ 0.33
SPTB-205ENST00000542694 ZMYM2Q9UBW7 1377 aa17.11■□□□□ 0.33
SPTB-205ENST00000542694 TRANK1O15050 2925 aa17.1■□□□□ 0.33
SPTB-205ENST00000542694 FNDC1Q4ZHG4 1894 aaPredicted RBP17.1■□□□□ 0.33
SPTB-205ENST00000542694 MYH11P35749 1972 aa17.1■□□□□ 0.33
SPTB-205ENST00000542694 RFXAPO00287 272 aa17.1■□□□□ 0.33
SPTB-205ENST00000542694 OFD1O75665 1012 aa17.1■□□□□ 0.33
SPTB-205ENST00000542694 LIG1P18858 919 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms