RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 MYO5CQ9NQX4 1742 aa6.98□□□□□ -1.29
XRCC4-206ENST00000542685 EIF3AQ14152 1382 aaKnown RBP6.97□□□□□ -1.29
XRCC4-206ENST00000542685 H7C1D1 291 aa6.97□□□□□ -1.29
XRCC4-206ENST00000542685 TRAF5O00463 557 aa6.97□□□□□ -1.29
XRCC4-206ENST00000542685 SLC26A4O43511 780 aa6.97□□□□□ -1.29
XRCC4-206ENST00000542685 PRLP01236 227 aa6.97□□□□□ -1.29
XRCC4-206ENST00000542685 FNTBP49356 437 aa6.97□□□□□ -1.29
XRCC4-206ENST00000542685 MAMDC4Q6UXC1 1216 aa6.97□□□□□ -1.29
XRCC4-206ENST00000542685 USP51Q70EK9 711 aa6.97□□□□□ -1.29
XRCC4-206ENST00000542685 ZNF808Q8N4W9 903 aaPredicted RBP6.97□□□□□ -1.29
XRCC4-206ENST00000542685 SHCBP1Q8NEM2 672 aa6.97□□□□□ -1.29
XRCC4-206ENST00000542685 E2F7Q96AV8 911 aa6.97□□□□□ -1.29
XRCC4-206ENST00000542685 NEURL4Q96JN8 1562 aa6.97□□□□□ -1.29
XRCC4-206ENST00000542685 SORCS2Q96PQ0 1159 aa6.97□□□□□ -1.29
XRCC4-206ENST00000542685 MYCBPQ99417 103 aaPredicted RBP6.97□□□□□ -1.29
XRCC4-206ENST00000542685 ACSS2Q9NR19 701 aa6.97□□□□□ -1.29
XRCC4-206ENST00000542685 CHMP5Q9NZZ3 219 aa6.97□□□□□ -1.29
XRCC4-206ENST00000542685 RAI14Q9P0K7 980 aa6.97□□□□□ -1.29
XRCC4-206ENST00000542685 CGNQ9P2M7 1197 aaKnown RBP6.97□□□□□ -1.29
XRCC4-206ENST00000542685 SYNJ2O15056 1496 aa6.97□□□□□ -1.29
XRCC4-206ENST00000542685 ATP10AO60312 1499 aa6.97□□□□□ -1.29
XRCC4-206ENST00000542685 GPATCH8Q9UKJ3 1502 aaKnown RBP6.96□□□□□ -1.29
XRCC4-206ENST00000542685 ANKRD30AQ9BXX3 1397 aa6.96□□□□□ -1.29
XRCC4-206ENST00000542685 KIF1CO43896 1103 aaKnown RBP6.96□□□□□ -1.3
XRCC4-206ENST00000542685 ASMTLO95671 621 aa6.96□□□□□ -1.3
XRCC4-206ENST00000542685 JMJD7P0C870 316 aa6.96□□□□□ -1.3
XRCC4-206ENST00000542685 SDSP20132 328 aa6.96□□□□□ -1.3
XRCC4-206ENST00000542685 CALRP27797 417 aaKnown RBP6.96□□□□□ -1.3
XRCC4-206ENST00000542685 ACVRL1P37023 503 aa6.96□□□□□ -1.3
XRCC4-206ENST00000542685 STAT3P40763 770 aa6.96□□□□□ -1.3
XRCC4-206ENST00000542685 ROM1Q03395 351 aa6.96□□□□□ -1.3
XRCC4-206ENST00000542685 FOXE3Q13461 319 aa6.96□□□□□ -1.3
XRCC4-206ENST00000542685 GRM7Q14831 915 aa6.96□□□□□ -1.3
XRCC4-206ENST00000542685 ACAP1Q15027 740 aa6.96□□□□□ -1.3
XRCC4-206ENST00000542685 SYCP1Q15431 976 aa6.96□□□□□ -1.3
XRCC4-206ENST00000542685 ZNF174Q15697 407 aa6.96□□□□□ -1.3
XRCC4-206ENST00000542685 SLFN12LQ6IEE8 588 aa6.96□□□□□ -1.3
XRCC4-206ENST00000542685 KIAA1958Q8N8K9 716 aa6.96□□□□□ -1.3
XRCC4-206ENST00000542685 NELFAQ9H3P2 528 aa6.96□□□□□ -1.3
XRCC4-206ENST00000542685 RRP7BPQ9NSQ0 103 aa6.96□□□□□ -1.3
XRCC4-206ENST00000542685 SAE1Q9UBE0 346 aaPredicted RBP6.96□□□□□ -1.3
XRCC4-206ENST00000542685 KCNG1Q9UIX4 513 aa6.96□□□□□ -1.3
XRCC4-206ENST00000542685 IQGAP3Q86VI3 1631 aa6.96□□□□□ -1.3
XRCC4-206ENST00000542685 SYNMO15061 1565 aa6.95□□□□□ -1.3
XRCC4-206ENST00000542685 UBA6A0AVT1 1052 aaPredicted RBP6.95□□□□□ -1.3
XRCC4-206ENST00000542685 NPIPB8E9PQR5 432 aa6.95□□□□□ -1.3
XRCC4-206ENST00000542685 MAFO75444 373 aaPredicted RBP6.95□□□□□ -1.3
XRCC4-206ENST00000542685 SLPIP03973 132 aa6.95□□□□□ -1.3
XRCC4-206ENST00000542685 PTX3P26022 381 aaPredicted RBP6.95□□□□□ -1.3
XRCC4-206ENST00000542685 FLT3P36888 993 aa6.95□□□□□ -1.3
XRCC4-206ENST00000542685 ATP2C1P98194 919 aaPredicted RBP6.95□□□□□ -1.3
XRCC4-206ENST00000542685 SATB1Q01826 763 aa6.95□□□□□ -1.3
XRCC4-206ENST00000542685 CCDC144BQ3MJ40 725 aa6.95□□□□□ -1.3
XRCC4-206ENST00000542685 KLHDC10Q6PID8 442 aa6.95□□□□□ -1.3
XRCC4-206ENST00000542685 UBE2R2Q712K3 238 aaPredicted RBP6.95□□□□□ -1.3
XRCC4-206ENST00000542685 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.95□□□□□ -1.3
XRCC4-206ENST00000542685 MAML3Q96JK9 1138 aa6.95□□□□□ -1.3
XRCC4-206ENST00000542685 TUBGCP5Q96RT8 1024 aa6.95□□□□□ -1.3
XRCC4-206ENST00000542685 CSRNP2Q9H175 543 aa6.95□□□□□ -1.3
XRCC4-206ENST00000542685 AGO3Q9H9G7 860 aaKnown RBP6.95□□□□□ -1.3
XRCC4-206ENST00000542685 MSL2Q9HCI7 577 aa6.95□□□□□ -1.3
XRCC4-206ENST00000542685 TLR9Q9NR96 1032 aa6.95□□□□□ -1.3
XRCC4-206ENST00000542685 OGFRQ9NZT2 677 aa6.95□□□□□ -1.3
XRCC4-206ENST00000542685 DENND2AQ9ULE3 1009 aa6.95□□□□□ -1.3
XRCC4-206ENST00000542685 ZKSCAN5Q9Y2L8 839 aa6.95□□□□□ -1.3
XRCC4-206ENST00000542685 VWA7Q9Y334 891 aa6.95□□□□□ -1.3
XRCC4-206ENST00000542685 CTDP1Q9Y5B0 961 aaPredicted RBP6.95□□□□□ -1.3
XRCC4-206ENST00000542685 CCDC141Q6ZP82 1450 aa6.95□□□□□ -1.3
XRCC4-206ENST00000542685 MAGI2Q86UL8 1455 aa6.95□□□□□ -1.3
XRCC4-206ENST00000542685 NLRP1Q9C000 1473 aa6.95□□□□□ -1.3
XRCC4-206ENST00000542685 IQGAP1P46940 1657 aa6.95□□□□□ -1.3
XRCC4-206ENST00000542685 KIAA1210Q9ULL0 1709 aa6.95□□□□□ -1.3
XRCC4-206ENST00000542685 PREX2Q70Z35 1606 aa6.94□□□□□ -1.3
XRCC4-206ENST00000542685 ANKRD50Q9ULJ7 1429 aa6.94□□□□□ -1.3
XRCC4-206ENST00000542685 CYR61O00622 381 aa6.94□□□□□ -1.3
XRCC4-206ENST00000542685 PLSCR1O15162 318 aa6.94□□□□□ -1.3
XRCC4-206ENST00000542685 CYP17A1P05093 508 aa6.94□□□□□ -1.3
XRCC4-206ENST00000542685 HIBADHP31937 336 aaKnown RBP6.94□□□□□ -1.3
XRCC4-206ENST00000542685 ANTXR2P58335 489 aa6.94□□□□□ -1.3
XRCC4-206ENST00000542685 HHEXQ03014 270 aa6.94□□□□□ -1.3
XRCC4-206ENST00000542685 RIN1Q13671 783 aa6.94□□□□□ -1.3
XRCC4-206ENST00000542685 CFAP100Q494V2 611 aa6.94□□□□□ -1.3
XRCC4-206ENST00000542685 TTC38Q5R3I4 469 aa6.94□□□□□ -1.3
XRCC4-206ENST00000542685 PRAMEF9Q5VWM5 478 aa6.94□□□□□ -1.3
XRCC4-206ENST00000542685 CDCA2Q69YH5 1023 aaPredicted RBP6.94□□□□□ -1.3
XRCC4-206ENST00000542685 ZNF771Q7L3S4 317 aaPredicted RBP6.94□□□□□ -1.3
XRCC4-206ENST00000542685 SGMS1Q86VZ5 419 aa6.94□□□□□ -1.3
XRCC4-206ENST00000542685 EGFL6Q8IUX8 553 aa6.94□□□□□ -1.3
XRCC4-206ENST00000542685 C1orf210Q8IVY1 113 aa6.94□□□□□ -1.3
XRCC4-206ENST00000542685 D2HGDHQ8N465 521 aa6.94□□□□□ -1.3
XRCC4-206ENST00000542685 MNS1Q8NEH6 495 aa6.94□□□□□ -1.3
XRCC4-206ENST00000542685 OR5AN1Q8NGI8 311 aa6.94□□□□□ -1.3
XRCC4-206ENST00000542685 PDLIM2Q96JY6 352 aa6.94□□□□□ -1.3
XRCC4-206ENST00000542685 NCAPGQ9BPX3 1015 aa6.94□□□□□ -1.3
XRCC4-206ENST00000542685 UPF2Q9HAU5 1272 aaKnown RBP6.94□□□□□ -1.3
XRCC4-206ENST00000542685 RCAN3Q9UKA8 241 aa6.94□□□□□ -1.3
XRCC4-206ENST00000542685 MAPK8IP3Q9UPT6 1336 aa6.94□□□□□ -1.3
XRCC4-206ENST00000542685 PRAG1Q86YV5 1406 aa6.93□□□□□ -1.3
XRCC4-206ENST00000542685 TTC36A6NLP5 189 aa6.93□□□□□ -1.3
XRCC4-206ENST00000542685 CBX4O00257 560 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms