RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 MXD4Q14582 209 aaPredicted RBP13.55□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 KIAA0753Q2KHM9 967 aa13.55□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 ODR4Q5SWX8 454 aa13.55□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 FAM102BQ5T8I3 360 aa13.55□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 CCSAPQ6IQ19 270 aaPredicted RBP13.55□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 EPM2AIP1Q7L775 607 aaPredicted RBP13.55□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 SESTD1Q86VW0 696 aa13.55□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 GAS2L3Q86XJ1 694 aa13.55□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 MYOCDQ8IZQ8 938 aa13.55□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 ZNF710Q8N1W2 664 aa13.55□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 ENOX1Q8TC92 643 aaKnown RBP13.55□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 IFT74Q96LB3 600 aa13.55□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 SEZ6LQ9BYH1 1024 aa13.55□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 ZHX3Q9H4I2 956 aa13.55□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 MRPL44Q9H9J2 332 aaKnown RBP13.55□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 RWDD2AQ9UIY3 292 aa13.55□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 GDAQ9Y2T3 454 aa13.55□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 PCDHB13Q9Y5F0 798 aa13.55□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 DNAH14Q0VDD8 3507 aa13.54□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 BECN2A8MW95 431 aa13.54□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 PGK1P00558 417 aa13.54□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 ACRP10323 421 aa13.54□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 CSF2RAP15509 400 aa13.54□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 TMOD1P28289 359 aa13.54□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 PRCPP42785 496 aa13.54□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 NAMPTP43490 491 aa13.54□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 NCKAP1LP55160 1127 aa13.54□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 TPM4P67936 248 aa13.54□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 CDC42EP1Q00587 391 aa13.54□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 BEX3Q00994 111 aa13.54□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 LRRC63Q05C16 580 aa13.54□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 PTPN11Q06124 597 aaPredicted RBP13.54□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 POU5F1BQ06416 359 aa13.54□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 IQCB1Q15051 598 aa13.54□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 GRIK4Q16099 956 aa13.54□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 UVSSAQ2YD98 709 aa13.54□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 ISM2Q6H9L7 571 aa13.54□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 ZNF720Q7Z2F6 126 aa13.54□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 LINC01465Q8N7H1 131 aa13.54□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 PSPC1Q8WXF1 523 aaKnown RBP13.54□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 FIZ1Q96SL8 496 aa13.54□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 POLR3FQ9H1D9 316 aaPredicted RBP13.54□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 CBX8Q9HC52 389 aa13.54□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 SLC39A2Q9NP94 309 aa13.54□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 SIP14410 1827 aa13.54□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 PLXNA3P51805 1871 aa13.54□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 TECTAO75443 2155 aa13.54□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 ACACBO00763 2458 aa13.53□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 MBLAC1A4D2B0 266 aaPredicted RBP13.53□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 MYADML2A6NDP7 307 aa13.53□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 GOLGA6L19H0YKK7 550 aa13.53□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 DCXO43602 365 aa13.53□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 PPP1R37O75864 691 aa13.53□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 SMIM10L2AP0DMW4 78 aa13.53□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 SMIM10L2BP0DMW5 78 aa13.53□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 MYOGP15173 224 aa13.53□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 CD44P16070 742 aaKnown RBP13.53□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 CCNE1P24864 410 aa13.53□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 PTPN5P54829 565 aa13.53□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 SNRPFP62306 86 aaKnown RBP13.53□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 CENPPQ6IPU0 288 aa13.53□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 TRMT1LQ7Z2T5 733 aaKnown RBP13.53□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 SMYD4Q8IYR2 804 aaPredicted RBP13.53□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 ZNF507Q8TCN5 953 aa13.53□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 SH2D3AQ9BRG2 576 aa13.53□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 STRA6Q9BX79 667 aa13.53□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 NFKBIZQ9BYH8 718 aa13.53□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 TMEM206Q9H813 350 aa13.53□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 CGNQ9P2M7 1197 aaKnown RBP13.53□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 KMT2EQ8IZD2 1858 aa13.53□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 SMIM35A0A1B0GVV1 85 aa13.52□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 A0A1W2PQ45 241 aaPredicted RBP13.52□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 A0A1W2PQY0 241 aa13.52□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 EPOPA6NHQ4 379 aa13.52□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 DCDC2CA8MYV0 355 aa13.52□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 K7ENM7 598 aa13.52□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 GCNT3O95395 438 aa13.52□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 ASGR1P07306 291 aa13.52□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 SSTR3P32745 418 aaPredicted RBP13.52□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 NPTX2P47972 431 aa13.52□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 RABGGTBP53611 331 aa13.52□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 PEX3P56589 373 aa13.52□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 ADAM17P78536 824 aa13.52□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 GTF2BQ00403 316 aa13.52□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 TFDP1Q14186 410 aa13.52□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 NFRKBQ6P4R8 1299 aa13.52□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 MTHFD1LQ6UB35 978 aa13.52□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 DHX40Q8IX18 779 aaKnown RBP13.52□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 C7orf31Q8N865 590 aa13.52□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 GOLGA5Q8TBA6 731 aa13.52□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 NOC3LQ8WTT2 800 aaKnown RBP13.52□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 TMEM174Q8WUU8 243 aa13.52□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 SCFD1Q8WVM8 642 aa13.52□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 LMBR1Q8WVP7 490 aa13.52□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 NELFBQ8WX92 580 aa13.52□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 P2RX5Q93086 422 aa13.52□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 MFSD14AQ96MC6 490 aa13.52□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 MAP7D2Q96T17 732 aa13.52□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 TSG101Q99816 390 aa13.52□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 RBSNQ9H1K0 784 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms