RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 BPIFB4P59827 614 aa4.31□□□□□ -1.72
USP28-210ENST00000542033 CCT2P78371 535 aaKnown RBP4.31□□□□□ -1.72
USP28-210ENST00000542033 SRSF2Q01130 221 aaKnown RBP4.31□□□□□ -1.72
USP28-210ENST00000542033 HGFACQ04756 655 aa4.31□□□□□ -1.72
USP28-210ENST00000542033 CD69Q07108 199 aa4.31□□□□□ -1.72
USP28-210ENST00000542033 TCTN3Q6NUS6 607 aa4.31□□□□□ -1.72
USP28-210ENST00000542033 POLNQ7Z5Q5 900 aa4.31□□□□□ -1.72
USP28-210ENST00000542033 UNC5BQ8IZJ1 945 aa4.31□□□□□ -1.72
USP28-210ENST00000542033 ANKRD53Q8N9V6 530 aa4.31□□□□□ -1.72
USP28-210ENST00000542033 SHCBP1Q8NEM2 672 aa4.31□□□□□ -1.72
USP28-210ENST00000542033 PAWRQ96IZ0 340 aaKnown RBP4.31□□□□□ -1.72
USP28-210ENST00000542033 RPL10LQ96L21 214 aaKnown RBP4.31□□□□□ -1.72
USP28-210ENST00000542033 OR14A2Q96R54 314 aa4.31□□□□□ -1.72
USP28-210ENST00000542033 ORAI2Q96SN7 254 aa4.31□□□□□ -1.72
USP28-210ENST00000542033 CEP89Q96ST8 783 aa4.31□□□□□ -1.72
USP28-210ENST00000542033 SMAD5Q99717 465 aaKnown RBP4.31□□□□□ -1.72
USP28-210ENST00000542033 DPYSL5Q9BPU6 564 aa4.31□□□□□ -1.72
USP28-210ENST00000542033 FDXACB1Q9BRP7 624 aaPredicted RBP4.31□□□□□ -1.72
USP28-210ENST00000542033 KLC2Q9H0B6 622 aa4.31□□□□□ -1.72
USP28-210ENST00000542033 PRDM12Q9H4Q4 367 aa4.31□□□□□ -1.72
USP28-210ENST00000542033 IFT122Q9HBG6 1241 aa4.31□□□□□ -1.72
USP28-210ENST00000542033 ST6GALNAC2Q9UJ37 374 aa4.31□□□□□ -1.72
USP28-210ENST00000542033 MRFAP1Q9Y605 127 aa4.31□□□□□ -1.72
USP28-210ENST00000542033 SLC30A1Q9Y6M5 507 aa4.31□□□□□ -1.72
USP28-210ENST00000542033 SHTN1A0MZ66 631 aa4.3□□□□□ -1.72
USP28-210ENST00000542033 MUSKO15146 869 aa4.3□□□□□ -1.72
USP28-210ENST00000542033 PRAMEF4O60810 478 aa4.3□□□□□ -1.72
USP28-210ENST00000542033 TOX4O94842 621 aa4.3□□□□□ -1.72
USP28-210ENST00000542033 JUNP05412 331 aaKnown RBP4.3□□□□□ -1.72
USP28-210ENST00000542033 VSIG10L2P0DP72 767 aa4.3□□□□□ -1.72
USP28-210ENST00000542033 ZNF20P17024 532 aa4.3□□□□□ -1.72
USP28-210ENST00000542033 COMTP21964 271 aa4.3□□□□□ -1.72
USP28-210ENST00000542033 CCND1P24385 295 aa4.3□□□□□ -1.72
USP28-210ENST00000542033 KIR2DL3P43628 341 aa4.3□□□□□ -1.72
USP28-210ENST00000542033 ADCY7P51828 1080 aa4.3□□□□□ -1.72
USP28-210ENST00000542033 EXOSC10Q01780 885 aaKnown RBP4.3□□□□□ -1.72
USP28-210ENST00000542033 ACAP2Q15057 778 aa4.3□□□□□ -1.72
USP28-210ENST00000542033 ABCB5Q2M3G0 1257 aa4.3□□□□□ -1.72
USP28-210ENST00000542033 MUM1Q2TAK8 710 aa4.3□□□□□ -1.72
USP28-210ENST00000542033 GAGE13Q4V321 117 aa4.3□□□□□ -1.72
USP28-210ENST00000542033 BRDTQ58F21 947 aaPredicted RBP4.3□□□□□ -1.72
USP28-210ENST00000542033 FAM180AQ6UWF9 173 aa4.3□□□□□ -1.72
USP28-210ENST00000542033 NOL8Q76FK4 1167 aaKnown RBP4.3□□□□□ -1.72
USP28-210ENST00000542033 PNMA8AQ86V59 439 aaPredicted RBP4.3□□□□□ -1.72
USP28-210ENST00000542033 SLC41A1Q8IVJ1 513 aa4.3□□□□□ -1.72
USP28-210ENST00000542033 RPUSD2Q8IZ73 545 aaKnown RBP4.3□□□□□ -1.72
USP28-210ENST00000542033 PPP1R14CQ8TAE6 165 aa4.3□□□□□ -1.72
USP28-210ENST00000542033 CFHR4Q92496 578 aa4.3□□□□□ -1.72
USP28-210ENST00000542033 RABGGTAQ92696 567 aa4.3□□□□□ -1.72
USP28-210ENST00000542033 FATE1Q969F0 183 aa4.3□□□□□ -1.72
USP28-210ENST00000542033 FAM89AQ96GI7 184 aa4.3□□□□□ -1.72
USP28-210ENST00000542033 PLA2G12BQ9BX93 195 aa4.3□□□□□ -1.72
USP28-210ENST00000542033 ACE2Q9BYF1 805 aaPredicted RBP4.3□□□□□ -1.72
USP28-210ENST00000542033 CD248Q9HCU0 757 aa4.3□□□□□ -1.72
USP28-210ENST00000542033 TYW1Q9NV66 732 aaKnown RBP4.3□□□□□ -1.72
USP28-210ENST00000542033 NCDNQ9UBB6 729 aa4.3□□□□□ -1.72
USP28-210ENST00000542033 RCAN3Q9UKA8 241 aa4.3□□□□□ -1.72
USP28-210ENST00000542033 MYRFQ9Y2G1 1151 aa4.3□□□□□ -1.72
USP28-210ENST00000542033 GPR45Q9Y5Y3 372 aa4.3□□□□□ -1.72
USP28-210ENST00000542033 A0A1W2PRX2 142 aa4.29□□□□□ -1.72
USP28-210ENST00000542033 TRIM75PA6NK02 468 aa4.29□□□□□ -1.72
USP28-210ENST00000542033 C1QTNF3-AMACRE9PGA6 284 aa4.29□□□□□ -1.72
USP28-210ENST00000542033 MATN2O00339 956 aa4.29□□□□□ -1.72
USP28-210ENST00000542033 GABRDO14764 452 aa4.29□□□□□ -1.72
USP28-210ENST00000542033 NRP1O14786 923 aa4.29□□□□□ -1.72
USP28-210ENST00000542033 XPOTO43592 962 aaKnown RBP4.29□□□□□ -1.72
USP28-210ENST00000542033 FOXS1O43638 330 aa4.29□□□□□ -1.72
USP28-210ENST00000542033 ALDH1A2O94788 518 aa4.29□□□□□ -1.72
USP28-210ENST00000542033 LTA4HP09960 611 aaKnown RBP4.29□□□□□ -1.72
USP28-210ENST00000542033 OSMP13725 252 aa4.29□□□□□ -1.72
USP28-210ENST00000542033 MEF2AQ02078 507 aaPredicted RBP4.29□□□□□ -1.72
USP28-210ENST00000542033 HHEXQ03014 270 aa4.29□□□□□ -1.72
USP28-210ENST00000542033 RIN1Q13671 783 aa4.29□□□□□ -1.72
USP28-210ENST00000542033 ACAP1Q15027 740 aa4.29□□□□□ -1.72
USP28-210ENST00000542033 CCDC181Q5TID7 509 aa4.29□□□□□ -1.72
USP28-210ENST00000542033 MBNL2Q5VZF2 373 aaKnown RBP4.29□□□□□ -1.72
USP28-210ENST00000542033 ZNF585AQ6P3V2 769 aa4.29□□□□□ -1.72
USP28-210ENST00000542033 KCNK18Q7Z418 384 aa4.29□□□□□ -1.72
USP28-210ENST00000542033 FUKQ8N0W3 1084 aa4.29□□□□□ -1.72
USP28-210ENST00000542033 CBARPQ8N350 705 aaPredicted RBP4.29□□□□□ -1.72
USP28-210ENST00000542033 PIK3C3Q8NEB9 887 aa4.29□□□□□ -1.72
USP28-210ENST00000542033 C1orf162Q8NEQ5 155 aaPredicted RBP4.29□□□□□ -1.72
USP28-210ENST00000542033 Q8TCH9 128 aa4.29□□□□□ -1.72
USP28-210ENST00000542033 FUBP3Q96I24 572 aaKnown RBP eCLIP4.29□□□□□ -1.72
USP28-210ENST00000542033 FAXDC2Q96IV6 333 aa4.29□□□□□ -1.72
USP28-210ENST00000542033 KRTAP9-3Q9BYQ3 159 aa4.29□□□□□ -1.72
USP28-210ENST00000542033 ASPSCR1Q9BZE9 553 aa4.29□□□□□ -1.72
USP28-210ENST00000542033 DDX56Q9NY93 547 aaKnown RBP4.29□□□□□ -1.72
USP28-210ENST00000542033 TSC22D4Q9Y3Q8 395 aa4.29□□□□□ -1.72
USP28-210ENST00000542033 SPEF1Q9Y4P9 236 aa4.29□□□□□ -1.72
USP28-210ENST00000542033 A0A1W2PR48 441 aa4.28□□□□□ -1.72
USP28-210ENST00000542033 KLHL33A6NCF5 533 aa4.28□□□□□ -1.72
USP28-210ENST00000542033 MTSS1O43312 755 aa4.28□□□□□ -1.72
USP28-210ENST00000542033 RBP3P10745 1247 aa4.28□□□□□ -1.72
USP28-210ENST00000542033 AGXTP21549 392 aa4.28□□□□□ -1.72
USP28-210ENST00000542033 MTNR1BP49286 362 aa4.28□□□□□ -1.72
USP28-210ENST00000542033 NPEPPSP55786 919 aa4.28□□□□□ -1.72
USP28-210ENST00000542033 GRM7Q14831 915 aa4.28□□□□□ -1.72
USP28-210ENST00000542033 PRKD1Q15139 912 aaPredicted RBP4.28□□□□□ -1.72
USP28-210ENST00000542033 ADRM1Q16186 407 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms