RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 C22orf31O95567 290 aa9.72□□□□□ -0.85
CLSTN3-212ENST00000541770 AOC1P19801 751 aa9.72□□□□□ -0.85
CLSTN3-212ENST00000541770 FGFR4P22455 802 aa9.72□□□□□ -0.85
CLSTN3-212ENST00000541770 MCM7P33993 719 aa9.72□□□□□ -0.85
CLSTN3-212ENST00000541770 ANP32AP39687 249 aaKnown RBP9.72□□□□□ -0.85
CLSTN3-212ENST00000541770 BCAR1P56945 870 aa9.72□□□□□ -0.85
CLSTN3-212ENST00000541770 RESTQ13127 1097 aa9.72□□□□□ -0.85
CLSTN3-212ENST00000541770 TDGQ13569 410 aa9.72□□□□□ -0.85
CLSTN3-212ENST00000541770 LONRF3Q496Y0 759 aa9.72□□□□□ -0.85
CLSTN3-212ENST00000541770 CLLU1OSQ5K130 101 aa9.72□□□□□ -0.85
CLSTN3-212ENST00000541770 LRCH2Q5VUJ6 765 aa9.72□□□□□ -0.85
CLSTN3-212ENST00000541770 EFCAB12Q6NXP0 572 aa9.72□□□□□ -0.85
CLSTN3-212ENST00000541770 ABHD15Q6UXT9 468 aa9.72□□□□□ -0.85
CLSTN3-212ENST00000541770 FAM43BQ6ZT52 329 aaPredicted RBP9.72□□□□□ -0.85
CLSTN3-212ENST00000541770 CCDC149Q6ZUS6 474 aa9.72□□□□□ -0.85
CLSTN3-212ENST00000541770 CABP7Q86V35 215 aa9.72□□□□□ -0.85
CLSTN3-212ENST00000541770 POTEDQ86YR6 584 aa9.72□□□□□ -0.85
CLSTN3-212ENST00000541770 SMAP1Q8IYB5 467 aaPredicted RBP9.72□□□□□ -0.85
CLSTN3-212ENST00000541770 CCDC105Q8IYK2 499 aa9.72□□□□□ -0.85
CLSTN3-212ENST00000541770 KIAA2013Q8IYS2 634 aa9.72□□□□□ -0.85
CLSTN3-212ENST00000541770 SIX5Q8N196 739 aa9.72□□□□□ -0.85
CLSTN3-212ENST00000541770 LRRC71Q8N4P6 559 aa9.72□□□□□ -0.85
CLSTN3-212ENST00000541770 SPRYD3Q8NCJ5 442 aa9.72□□□□□ -0.85
CLSTN3-212ENST00000541770 RDM1Q8NG50 284 aa9.72□□□□□ -0.85
CLSTN3-212ENST00000541770 MTMR9Q96QG7 549 aa9.72□□□□□ -0.85
CLSTN3-212ENST00000541770 MAP7D2Q96T17 732 aa9.72□□□□□ -0.85
CLSTN3-212ENST00000541770 TEKT3Q9BXF9 490 aa9.72□□□□□ -0.85
CLSTN3-212ENST00000541770 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.72□□□□□ -0.85
CLSTN3-212ENST00000541770 DZANK1Q9NVP4 752 aa9.72□□□□□ -0.85
CLSTN3-212ENST00000541770 SAMM50Q9Y512 469 aa9.72□□□□□ -0.85
CLSTN3-212ENST00000541770 ZFHX2Q9C0A1 2572 aaPredicted RBP9.71□□□□□ -0.85
CLSTN3-212ENST00000541770 IGKV6D-21A0A0A0MT36 114 aa9.71□□□□□ -0.86
CLSTN3-212ENST00000541770 MED19A0JLT2 244 aaPredicted RBP9.71□□□□□ -0.86
CLSTN3-212ENST00000541770 LAD1O00515 517 aa9.71□□□□□ -0.86
CLSTN3-212ENST00000541770 CFHP08603 1231 aa9.71□□□□□ -0.86
CLSTN3-212ENST00000541770 ZSCAN22P10073 491 aaPredicted RBP9.71□□□□□ -0.86
CLSTN3-212ENST00000541770 ATP2B1P20020 1258 aa9.71□□□□□ -0.86
CLSTN3-212ENST00000541770 ATP4AP20648 1035 aa9.71□□□□□ -0.86
CLSTN3-212ENST00000541770 TMOD1P28289 359 aa9.71□□□□□ -0.86
CLSTN3-212ENST00000541770 SFNP31947 248 aa9.71□□□□□ -0.86
CLSTN3-212ENST00000541770 PPP2R5CQ13362 524 aa9.71□□□□□ -0.86
CLSTN3-212ENST00000541770 ZNF174Q15697 407 aa9.71□□□□□ -0.86
CLSTN3-212ENST00000541770 CALCRLQ16602 461 aa9.71□□□□□ -0.86
CLSTN3-212ENST00000541770 DGLUCYQ7Z3D6 616 aa9.71□□□□□ -0.86
CLSTN3-212ENST00000541770 FERMT3Q86UX7 667 aa9.71□□□□□ -0.86
CLSTN3-212ENST00000541770 C4orf32Q8N8J7 132 aa9.71□□□□□ -0.86
CLSTN3-212ENST00000541770 DTWD2Q8NBA8 298 aa9.71□□□□□ -0.86
CLSTN3-212ENST00000541770 FEZF2Q8TBJ5 459 aa9.71□□□□□ -0.86
CLSTN3-212ENST00000541770 BBXQ8WY36 941 aaPredicted RBP9.71□□□□□ -0.86
CLSTN3-212ENST00000541770 RIN2Q8WYP3 895 aaPredicted RBP9.71□□□□□ -0.86
CLSTN3-212ENST00000541770 RMDN1Q96DB5 314 aa9.71□□□□□ -0.86
CLSTN3-212ENST00000541770 RTP3Q9BQQ7 232 aa9.71□□□□□ -0.86
CLSTN3-212ENST00000541770 MRPL9Q9BYD2 267 aaKnown RBP9.71□□□□□ -0.86
CLSTN3-212ENST00000541770 GBP3Q9H0R5 595 aa9.71□□□□□ -0.86
CLSTN3-212ENST00000541770 TMEM60Q9H2L4 133 aa9.71□□□□□ -0.86
CLSTN3-212ENST00000541770 CEP131Q9UPN4 1083 aa9.71□□□□□ -0.86
CLSTN3-212ENST00000541770 USTQ9Y2C2 406 aa9.71□□□□□ -0.86
CLSTN3-212ENST00000541770 INPP5FQ9Y2H2 1132 aa9.71□□□□□ -0.86
CLSTN3-212ENST00000541770 PCDHB6Q9Y5E3 794 aa9.71□□□□□ -0.86
CLSTN3-212ENST00000541770 PCDHA10Q9Y5I2 948 aa9.71□□□□□ -0.86
CLSTN3-212ENST00000541770 R4GN57 208 aa9.71□□□□□ -0.86
CLSTN3-212ENST00000541770 WDR64B1ANS9 1081 aa9.7□□□□□ -0.86
CLSTN3-212ENST00000541770 ZBTB42B2RXF5 422 aa9.7□□□□□ -0.86
CLSTN3-212ENST00000541770 MARCH6O60337 910 aa9.7□□□□□ -0.86
CLSTN3-212ENST00000541770 BMP15O95972 392 aa9.7□□□□□ -0.86
CLSTN3-212ENST00000541770 LMNAP02545 664 aaKnown RBP9.7□□□□□ -0.86
CLSTN3-212ENST00000541770 SSBP05455 408 aaKnown RBP eCLIP9.7□□□□□ -0.86
CLSTN3-212ENST00000541770 OR52Z1P0C646 297 aa9.7□□□□□ -0.86
CLSTN3-212ENST00000541770 NPR3P17342 541 aa9.7□□□□□ -0.86
CLSTN3-212ENST00000541770 EIF4BP23588 611 aaKnown RBP9.7□□□□□ -0.86
CLSTN3-212ENST00000541770 PRPHP41219 470 aa9.7□□□□□ -0.86
CLSTN3-212ENST00000541770 JAK3P52333 1124 aa9.7□□□□□ -0.86
CLSTN3-212ENST00000541770 SPIRE1Q08AE8 756 aa9.7□□□□□ -0.86
CLSTN3-212ENST00000541770 GIT2Q14161 759 aa9.7□□□□□ -0.86
CLSTN3-212ENST00000541770 NBR1Q14596 966 aa9.7□□□□□ -0.86
CLSTN3-212ENST00000541770 SPECC1Q5M775 1068 aa9.7□□□□□ -0.86
CLSTN3-212ENST00000541770 OTOP3Q7RTS5 596 aa9.7□□□□□ -0.86
CLSTN3-212ENST00000541770 TMEM173Q86WV6 379 aaPredicted RBP9.7□□□□□ -0.86
CLSTN3-212ENST00000541770 NLRP7Q8WX94 980 aa9.7□□□□□ -0.86
CLSTN3-212ENST00000541770 GJA10Q969M2 543 aa9.7□□□□□ -0.86
CLSTN3-212ENST00000541770 ZBP1Q9H171 429 aa9.7□□□□□ -0.86
CLSTN3-212ENST00000541770 UNC45AQ9H3U1 944 aa9.7□□□□□ -0.86
CLSTN3-212ENST00000541770 SFXN1Q9H9B4 322 aa9.7□□□□□ -0.86
CLSTN3-212ENST00000541770 KCNK12Q9HB15 430 aa9.7□□□□□ -0.86
CLSTN3-212ENST00000541770 GABBR1Q9UBS5 961 aa9.7□□□□□ -0.86
CLSTN3-212ENST00000541770 VAV3Q9UKW4 847 aa9.7□□□□□ -0.86
CLSTN3-212ENST00000541770 CA14Q9ULX7 337 aa9.7□□□□□ -0.86
CLSTN3-212ENST00000541770 PCDHA12Q9UN75 941 aa9.7□□□□□ -0.86
CLSTN3-212ENST00000541770 DUSP12Q9UNI6 340 aa9.7□□□□□ -0.86
CLSTN3-212ENST00000541770 MAGEB2O15479 319 aa9.69□□□□□ -0.86
CLSTN3-212ENST00000541770 NARSO43776 548 aaKnown RBP9.69□□□□□ -0.86
CLSTN3-212ENST00000541770 CSDE1O75534 798 aaKnown RBP9.69□□□□□ -0.86
CLSTN3-212ENST00000541770 F13A1P00488 732 aa9.69□□□□□ -0.86
CLSTN3-212ENST00000541770 PSAPP07602 524 aa9.69□□□□□ -0.86
CLSTN3-212ENST00000541770 MYBP10242 640 aa9.69□□□□□ -0.86
CLSTN3-212ENST00000541770 CTSAP10619 480 aa9.69□□□□□ -0.86
CLSTN3-212ENST00000541770 KLRC2P26717 231 aa9.69□□□□□ -0.86
CLSTN3-212ENST00000541770 GBP2P32456 591 aaPredicted RBP9.69□□□□□ -0.86
CLSTN3-212ENST00000541770 DDIT3P35638 169 aa9.69□□□□□ -0.86
CLSTN3-212ENST00000541770 ATP2C1P98194 919 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms