RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	IQSEC1	Q6DN90	963 aa		6.14	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	ZNF572	Q7Z3I7	529 aa	Predicted RBP	6.14	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	SPATS2	Q86XZ4	545 aa	Known RBP	6.14	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	BAP1	Q92560	729 aa		6.14	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	RAPGEF5	Q92565	580 aa		6.14	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	MAGOHB	Q96A72	148 aa	Known RBP	6.14	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	FAM20A	Q96MK3	541 aa		6.14	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	ZNF577	Q9BSK1	485 aa		6.14	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	NT5C3A	Q9H0P0	336 aa		6.14	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	RNF208	Q9H0X6	261 aa		6.14	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	DPH5	Q9H2P9	285 aa		6.14	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	GGT7	Q9UJ14	662 aa		6.14	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	FBXL5	Q9UKA1	691 aa		6.14	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	AKAP11	Q9UKA4	1901 aa		6.14	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	IGKV6D-41	A0A0C4DH26	115 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	ATP2A1	O14983	1001 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	TXN	P10599	105 aa	Known RBP	6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	TGFB3	P10600	412 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	TXK	P42681	527 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	SCTR	P47872	440 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	LACTB	P83111	547 aa	Predicted RBP	6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	CDK17	Q00537	523 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	TNFAIP2	Q03169	654 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	ZNF844	Q08AG5	666 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	MTMR1	Q13613	665 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	RAPGEF1	Q13905	1077 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	ANKRD20A8P	Q5CZ79	823 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	PDXDC1	Q6P996	788 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	CDAN1	Q8IWY9	1227 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	UHMK1	Q8TAS1	419 aa	Known RBP	6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	CNKSR2	Q8WXI2	1034 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	GPRASP2	Q96D09	838 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	IFT74	Q96LB3	600 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	DDX25	Q9UHL0	483 aa	Known RBP	6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	MYH13	Q9UKX3	1938 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783		A0A087X0T9	212 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783		A0A1W2PQJ5	194 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	ARHGEF35	A5YM69	484 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	EIF4E1B	A6NMX2	242 aa	Known RBP	6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	DAPK3	O43293	454 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	MYL3	P08590	195 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	FAM228B	P0C875	321 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	ITGA4	P13612	1032 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	ABCD1	P33897	745 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	FLT3LG	P49771	235 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	PPP1R7	Q15435	360 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	GLE1	Q53GS7	698 aa	Known RBP	6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	LRCH2	Q5VUJ6	765 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	HGSNAT	Q68CP4	663 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	HIBCH	Q6NVY1	386 aa	Predicted RBP	6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	ADAT2	Q7Z6V5	191 aa	Known RBP	6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	YTHDF3	Q7Z739	585 aa	Known RBP	6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	HOMEZ	Q8IX15	550 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	CACNA2D3	Q8IZS8	1091 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	TCP11	Q8WWU5	503 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	THOC1	Q96FV9	657 aa	Known RBP	6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	AGBL1	Q96MI9	1066 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	LSM14B	Q9BX40	385 aa	Known RBP	6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	CELF4	Q9BZC1	486 aa	Known RBP	6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	IL17RB	Q9NRM6	502 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	PKD2L1	Q9P0L9	805 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	TLDC2	A0PJX2	215 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	MYMK	A6NI61	221 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	TMCO5B	A8MYB1	307 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	SUPT20HL2	P0C7V6	817 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	GBP2	P32456	591 aa	Predicted RBP	6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	SNAP25	P60880	206 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	RPS6	P62753	249 aa	Known RBP	6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	ARHGAP4	P98171	946 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	KCNMA1	Q12791	1236 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	KRT71	Q3SY84	523 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	TREML2	Q5T2D2	321 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	FAM133A	Q8N9E0	248 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	TAF4B	Q92750	862 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	GJA10	Q969M2	543 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	HVCN1	Q96D96	273 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	DNAJC18	Q9H819	358 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	A1CF	Q9NQ94	594 aa	Known RBP	6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	AMACR	Q9UHK6	382 aa		6.13	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	SCN4A	P35499	1836 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	PAPPA2	Q9BXP8	1791 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783		A0A1W2PRG0	241 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	HGS	O14964	777 aa	Predicted RBP	6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	TRAPPC3	O43617	180 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	CLTA	P09496	248 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	OR52Z1	P0C646	297 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	C6orf222	P0C671	652 aa	Predicted RBP	6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	TNFRSF8	P28908	595 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	HNRNPH3	P31942	346 aa	Known RBP	6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	HSPA9	P38646	679 aa	Known RBP	6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	CDC42EP1	Q00587	391 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	CACNB1	Q02641	598 aa	Predicted RBP	6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	BYSL	Q13895	437 aa	Known RBP	6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	MAN2A1	Q16706	1144 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	SLC35G1	Q2M3R5	365 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	ASTE1	Q2TB18	679 aa	Predicted RBP	6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	FIGN	Q5HY92	759 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	SFMBT2	Q5VUG0	894 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	EEPD1	Q7L9B9	569 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	NELFCD	Q8IXH7	590 aa		6.12	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms