RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 FLCNQ8NFG4 579 aa8.21□□□□□ -1.1
YBX3-209ENST00000540747 BICD2Q8TD16 824 aa8.21□□□□□ -1.1
YBX3-209ENST00000540747 PHKBQ93100 1093 aa8.21□□□□□ -1.1
YBX3-209ENST00000540747 ACSF2Q96CM8 615 aaPredicted RBP8.21□□□□□ -1.1
YBX3-209ENST00000540747 SCLT1Q96NL6 688 aa8.21□□□□□ -1.1
YBX3-209ENST00000540747 SH2D3AQ9BRG2 576 aa8.21□□□□□ -1.1
YBX3-209ENST00000540747 HERC2P3Q9BVR0 1158 aa8.21□□□□□ -1.1
YBX3-209ENST00000540747 TEKT3Q9BXF9 490 aa8.21□□□□□ -1.1
YBX3-209ENST00000540747 RNF26Q9BY78 433 aaPredicted RBP8.21□□□□□ -1.1
YBX3-209ENST00000540747 MFSD1Q9H3U5 465 aa8.21□□□□□ -1.1
YBX3-209ENST00000540747 MINDY3Q9H8M7 445 aa8.21□□□□□ -1.1
YBX3-209ENST00000540747 RXFP1Q9HBX9 757 aa8.21□□□□□ -1.1
YBX3-209ENST00000540747 WDR6Q9NNW5 1121 aaKnown RBP8.21□□□□□ -1.1
YBX3-209ENST00000540747 DLGAP2Q9P1A6 1054 aa8.21□□□□□ -1.1
YBX3-209ENST00000540747 SUCLA2Q9P2R7 463 aaPredicted RBP8.21□□□□□ -1.1
YBX3-209ENST00000540747 WNT16Q9UBV4 365 aa8.21□□□□□ -1.1
YBX3-209ENST00000540747 SEPT9Q9UHD8 586 aaPredicted RBP8.21□□□□□ -1.1
YBX3-209ENST00000540747 INPP5FQ9Y2H2 1132 aa8.21□□□□□ -1.1
YBX3-209ENST00000540747 PCDHB2Q9Y5E7 798 aa8.21□□□□□ -1.1
YBX3-209ENST00000540747 CNTNAP2Q9UHC6 1331 aa8.21□□□□□ -1.1
YBX3-209ENST00000540747 CACNA1IQ9P0X4 2223 aa8.2□□□□□ -1.1
YBX3-209ENST00000540747 NRP1O14786 923 aa8.2□□□□□ -1.1
YBX3-209ENST00000540747 TEX28O15482 410 aa8.2□□□□□ -1.1
YBX3-209ENST00000540747 TDP2O95551 362 aa8.2□□□□□ -1.1
YBX3-209ENST00000540747 SOD2P04179 222 aa8.2□□□□□ -1.1
YBX3-209ENST00000540747 NCLP19338 710 aaKnown RBP8.2□□□□□ -1.1
YBX3-209ENST00000540747 ID4P47928 161 aa8.2□□□□□ -1.1
YBX3-209ENST00000540747 LONRF3Q496Y0 759 aa8.2□□□□□ -1.1
YBX3-209ENST00000540747 KIAA0319Q5VV43 1072 aa8.2□□□□□ -1.1
YBX3-209ENST00000540747 TAS1R1Q7RTX1 841 aa8.2□□□□□ -1.1
YBX3-209ENST00000540747 CATSPER4Q7RTX7 472 aa8.2□□□□□ -1.1
YBX3-209ENST00000540747 MIER3Q7Z3K6 550 aa8.2□□□□□ -1.1
YBX3-209ENST00000540747 COLGALT2Q8IYK4 626 aa8.2□□□□□ -1.1
YBX3-209ENST00000540747 ZNF579Q8NAF0 562 aaKnown RBP8.2□□□□□ -1.1
YBX3-209ENST00000540747 DAGLBQ8NCG7 672 aa8.2□□□□□ -1.1
YBX3-209ENST00000540747 SMG8Q8ND04 991 aaKnown RBP8.2□□□□□ -1.1
YBX3-209ENST00000540747 CCDC148Q8NFR7 591 aa8.2□□□□□ -1.1
YBX3-209ENST00000540747 TBCKQ8TEA7 893 aa8.2□□□□□ -1.1
YBX3-209ENST00000540747 RSAD2Q8WXG1 361 aa8.2□□□□□ -1.1
YBX3-209ENST00000540747 BRF1Q92994 677 aa8.2□□□□□ -1.1
YBX3-209ENST00000540747 RPS6KC1Q96S38 1066 aa8.2□□□□□ -1.1
YBX3-209ENST00000540747 MYADMQ96S97 322 aa8.2□□□□□ -1.1
YBX3-209ENST00000540747 EMILIN2Q9BXX0 1053 aa8.2□□□□□ -1.1
YBX3-209ENST00000540747 INO80BQ9C086 356 aaPredicted RBP8.2□□□□□ -1.1
YBX3-209ENST00000540747 SEMA4AQ9H3S1 761 aa8.2□□□□□ -1.1
YBX3-209ENST00000540747 DHX33Q9H6R0 707 aaKnown RBP8.2□□□□□ -1.1
YBX3-209ENST00000540747 RSAD1Q9HA92 442 aa8.2□□□□□ -1.1
YBX3-209ENST00000540747 MAN1C1Q9NR34 630 aa8.2□□□□□ -1.1
YBX3-209ENST00000540747 SH3GLB2Q9NR46 395 aa8.2□□□□□ -1.1
YBX3-209ENST00000540747 PPP4R2Q9NY27 417 aa8.2□□□□□ -1.1
YBX3-209ENST00000540747 VPS54Q9P1Q0 977 aa8.2□□□□□ -1.1
YBX3-209ENST00000540747 WRAP73Q9P2S5 460 aaPredicted RBP8.2□□□□□ -1.1
YBX3-209ENST00000540747 VAV3Q9UKW4 847 aa8.2□□□□□ -1.1
YBX3-209ENST00000540747 CHD8Q9HCK8 2581 aa8.2□□□□□ -1.1
YBX3-209ENST00000540747 CLUHO75153 1309 aa8.2□□□□□ -1.1
YBX3-209ENST00000540747 FANCMQ8IYD8 2048 aa8.2□□□□□ -1.1
YBX3-209ENST00000540747 ANHXE9PGG2 379 aa8.19□□□□□ -1.1
YBX3-209ENST00000540747 EML1O00423 815 aa8.19□□□□□ -1.1
YBX3-209ENST00000540747 KLRC2P26717 231 aa8.19□□□□□ -1.1
YBX3-209ENST00000540747 CA8P35219 290 aa8.19□□□□□ -1.1
YBX3-209ENST00000540747 DNM2P50570 870 aa8.19□□□□□ -1.1
YBX3-209ENST00000540747 PSMC5P62195 406 aa8.19□□□□□ -1.1
YBX3-209ENST00000540747 DSG1Q02413 1049 aa8.19□□□□□ -1.1
YBX3-209ENST00000540747 RNASELQ05823 741 aaKnown RBP8.19□□□□□ -1.1
YBX3-209ENST00000540747 HTR4Q13639 388 aa8.19□□□□□ -1.1
YBX3-209ENST00000540747 PLA2G4FQ68DD2 849 aa8.19□□□□□ -1.1
YBX3-209ENST00000540747 PHLDB3Q6NSJ2 640 aa8.19□□□□□ -1.1
YBX3-209ENST00000540747 LILRA6Q6PI73 481 aa8.19□□□□□ -1.1
YBX3-209ENST00000540747 Q6ZUG5 572 aa8.19□□□□□ -1.1
YBX3-209ENST00000540747 SRGAP1Q7Z6B7 1085 aa8.19□□□□□ -1.1
YBX3-209ENST00000540747 SKAP1Q86WV1 359 aa8.19□□□□□ -1.1
YBX3-209ENST00000540747 RHPN2Q8IUC4 686 aa8.19□□□□□ -1.1
YBX3-209ENST00000540747 GPR65Q8IYL9 337 aa8.19□□□□□ -1.1
YBX3-209ENST00000540747 SLC44A3Q8N4M1 653 aa8.19□□□□□ -1.1
YBX3-209ENST00000540747 HDAC7Q8WUI4 952 aa8.19□□□□□ -1.1
YBX3-209ENST00000540747 NXPE3Q969Y0 559 aa8.19□□□□□ -1.1
YBX3-209ENST00000540747 RMDN1Q96DB5 314 aa8.19□□□□□ -1.1
YBX3-209ENST00000540747 PGBD4Q96DM1 585 aa8.19□□□□□ -1.1
YBX3-209ENST00000540747 GBP3Q9H0R5 595 aa8.19□□□□□ -1.1
YBX3-209ENST00000540747 KCNMB3Q9NPA1 279 aa8.19□□□□□ -1.1
YBX3-209ENST00000540747 MRPL17Q9NRX2 175 aaKnown RBP8.19□□□□□ -1.1
YBX3-209ENST00000540747 CHST7Q9NS84 486 aa8.19□□□□□ -1.1
YBX3-209ENST00000540747 KANSL3Q9P2N6 904 aa8.19□□□□□ -1.1
YBX3-209ENST00000540747 PPME1Q9Y570 386 aa8.19□□□□□ -1.1
YBX3-209ENST00000540747 COL4A3BPQ9Y5P4 624 aa8.19□□□□□ -1.1
YBX3-209ENST00000540747 SNX14Q9Y5W7 946 aa8.19□□□□□ -1.1
YBX3-209ENST00000540747 CCDC195A0A1B0GUA6 201 aa8.18□□□□□ -1.1
YBX3-209ENST00000540747 DDX11L8A8MPP1 907 aa8.18□□□□□ -1.1
YBX3-209ENST00000540747 F8W810 466 aa8.18□□□□□ -1.1
YBX3-209ENST00000540747 SLC37A4O43826 429 aa8.18□□□□□ -1.1
YBX3-209ENST00000540747 RFPL2O75678 378 aa8.18□□□□□ -1.1
YBX3-209ENST00000540747 GLUD1P00367 558 aa8.18□□□□□ -1.1
YBX3-209ENST00000540747 LMNAP02545 664 aaKnown RBP8.18□□□□□ -1.1
YBX3-209ENST00000540747 ALDH2P05091 517 aa8.18□□□□□ -1.1
YBX3-209ENST00000540747 SSBP05455 408 aaKnown RBP eCLIP8.18□□□□□ -1.1
YBX3-209ENST00000540747 URODP06132 367 aa8.18□□□□□ -1.1
YBX3-209ENST00000540747 ADH1AP07327 375 aa8.18□□□□□ -1.1
YBX3-209ENST00000540747 SRFP11831 508 aa8.18□□□□□ -1.1
YBX3-209ENST00000540747 GLULP15104 373 aa8.18□□□□□ -1.1
YBX3-209ENST00000540747 RPS6KB1P23443 525 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms