RNA–Protein interactions for RNA: ENST00000540367.5

CPT1A-206, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-206ENST00000540367 UBL4BQ8N7F7 174 aa12.09□□□□□ -0.47
CPT1A-206ENST00000540367 THOC1Q96FV9 657 aaKnown RBP12.09□□□□□ -0.47
CPT1A-206ENST00000540367 RUNDC3BQ96NL0 473 aa12.09□□□□□ -0.47
CPT1A-206ENST00000540367 ROPN1BQ9BZX4 212 aaPredicted RBP12.09□□□□□ -0.47
CPT1A-206ENST00000540367 CCDC113Q9H0I3 377 aa12.09□□□□□ -0.47
CPT1A-206ENST00000540367 BCAS3Q9H6U6 928 aa12.09□□□□□ -0.47
CPT1A-206ENST00000540367 ROPN1Q9HAT0 212 aaPredicted RBP12.09□□□□□ -0.47
CPT1A-206ENST00000540367 OLFML3Q9NRN5 406 aa12.09□□□□□ -0.47
CPT1A-206ENST00000540367 ALG6Q9Y672 507 aa12.09□□□□□ -0.47
CPT1A-206ENST00000540367 GAKO14976 1311 aa12.09□□□□□ -0.47
CPT1A-206ENST00000540367 TBX3O15119 743 aa12.09□□□□□ -0.47
CPT1A-206ENST00000540367 NEBLO76041 1014 aa12.09□□□□□ -0.47
CPT1A-206ENST00000540367 NFIL3Q16649 462 aa12.09□□□□□ -0.47
CPT1A-206ENST00000540367 RC3H1Q5TC82 1133 aaKnown RBP12.09□□□□□ -0.47
CPT1A-206ENST00000540367 CCDC137Q6PK04 289 aaKnown RBP12.09□□□□□ -0.47
CPT1A-206ENST00000540367 EXOC3L1Q86VI1 746 aa12.09□□□□□ -0.47
CPT1A-206ENST00000540367 PALB2Q86YC2 1186 aa12.09□□□□□ -0.47
CPT1A-206ENST00000540367 ZSWIM1Q9BR11 485 aa12.09□□□□□ -0.47
CPT1A-206ENST00000540367 MKNK1Q9BUB5 465 aa12.09□□□□□ -0.47
CPT1A-206ENST00000540367 PFASO15067 1338 aa12.08□□□□□ -0.48
CPT1A-206ENST00000540367 IGF2BP3O00425 579 aaKnown RBP eCLIP12.08□□□□□ -0.48
CPT1A-206ENST00000540367 KIF3CO14782 793 aa12.08□□□□□ -0.48
CPT1A-206ENST00000540367 EIF3DO15371 548 aaKnown RBP eCLIP12.08□□□□□ -0.48
CPT1A-206ENST00000540367 SUN1O94901 812 aa12.08□□□□□ -0.48
CPT1A-206ENST00000540367 BNIP1Q12981 228 aa12.08□□□□□ -0.48
CPT1A-206ENST00000540367 GRAPQ13588 217 aa12.08□□□□□ -0.48
CPT1A-206ENST00000540367 KIF22Q14807 665 aa12.08□□□□□ -0.48
CPT1A-206ENST00000540367 CCDC38Q502W7 563 aa12.08□□□□□ -0.48
CPT1A-206ENST00000540367 MFSD14BQ5SR56 506 aa12.08□□□□□ -0.48
CPT1A-206ENST00000540367 SLC30A10Q6XR72 485 aa12.08□□□□□ -0.48
CPT1A-206ENST00000540367 EP400NLQ6ZTU2 488 aa12.08□□□□□ -0.48
CPT1A-206ENST00000540367 SLF2Q8IX21 1173 aa12.08□□□□□ -0.48
CPT1A-206ENST00000540367 CNBD1Q8NA66 436 aa12.08□□□□□ -0.48
CPT1A-206ENST00000540367 TBC1D16Q8TBP0 767 aa12.08□□□□□ -0.48
CPT1A-206ENST00000540367 GRAPLQ8TC17 118 aaPredicted RBP12.08□□□□□ -0.48
CPT1A-206ENST00000540367 DYDC1Q8WWB3 177 aa12.08□□□□□ -0.48
CPT1A-206ENST00000540367 CRYGNQ8WXF5 182 aa12.08□□□□□ -0.48
CPT1A-206ENST00000540367 KRT35Q92764 455 aa12.08□□□□□ -0.48
CPT1A-206ENST00000540367 ART4Q93070 314 aa12.08□□□□□ -0.48
CPT1A-206ENST00000540367 RUSC1Q9BVN2 902 aa12.08□□□□□ -0.48
CPT1A-206ENST00000540367 INTS2Q9H0H0 1204 aaKnown RBP12.08□□□□□ -0.48
CPT1A-206ENST00000540367 TAOK3Q9H2K8 898 aa12.08□□□□□ -0.48
CPT1A-206ENST00000540367 QTRT2Q9H974 415 aaKnown RBP12.08□□□□□ -0.48
CPT1A-206ENST00000540367 CD209Q9NNX6 404 aa12.08□□□□□ -0.48
CPT1A-206ENST00000540367 SEPT11Q9NVA2 429 aaKnown RBP12.08□□□□□ -0.48
CPT1A-206ENST00000540367 APEX2Q9UBZ4 518 aa12.08□□□□□ -0.48
CPT1A-206ENST00000540367 DBR1Q9UK59 544 aaKnown RBP12.08□□□□□ -0.48
CPT1A-206ENST00000540367 STK24Q9Y6E0 443 aa12.08□□□□□ -0.48
CPT1A-206ENST00000540367 O00370 1275 aa12.08□□□□□ -0.48
CPT1A-206ENST00000540367 GYS1P13807 737 aa12.08□□□□□ -0.48
CPT1A-206ENST00000540367 GAP43P17677 238 aa12.08□□□□□ -0.48
CPT1A-206ENST00000540367 CCND1P24385 295 aa12.08□□□□□ -0.48
CPT1A-206ENST00000540367 MARCKSL1P49006 195 aa12.08□□□□□ -0.48
CPT1A-206ENST00000540367 COPS2P61201 443 aa12.08□□□□□ -0.48
CPT1A-206ENST00000540367 AP3B2Q13367 1082 aa12.08□□□□□ -0.48
CPT1A-206ENST00000540367 TCEAL1Q15170 157 aa12.08□□□□□ -0.48
CPT1A-206ENST00000540367 CYP1B1Q16678 543 aa12.08□□□□□ -0.48
CPT1A-206ENST00000540367 SEL1L2Q5TEA6 688 aa12.08□□□□□ -0.48
CPT1A-206ENST00000540367 LRCH2Q5VUJ6 765 aa12.08□□□□□ -0.48
CPT1A-206ENST00000540367 KCTD1Q719H9 257 aa12.08□□□□□ -0.48
CPT1A-206ENST00000540367 CYFIP1Q7L576 1253 aa12.08□□□□□ -0.48
CPT1A-206ENST00000540367 ZDHHC14Q8IZN3 488 aa12.08□□□□□ -0.48
CPT1A-206ENST00000540367 BHMT2Q9H2M3 363 aa12.08□□□□□ -0.48
CPT1A-206ENST00000540367 FGFR1OP2Q9NVK5 253 aa12.08□□□□□ -0.48
CPT1A-206ENST00000540367 TCP11X1B4DZS4 312 aa12.07□□□□□ -0.48
CPT1A-206ENST00000540367 GJB6O95452 261 aa12.07□□□□□ -0.48
CPT1A-206ENST00000540367 SCNN1DP51172 638 aa12.07□□□□□ -0.48
CPT1A-206ENST00000540367 ARHGAP4P98171 946 aa12.07□□□□□ -0.48
CPT1A-206ENST00000540367 CTTNQ14247 550 aaKnown RBP12.07□□□□□ -0.48
CPT1A-206ENST00000540367 ZNF568Q3ZCX4 644 aa12.07□□□□□ -0.48
CPT1A-206ENST00000540367 Q4G0T1 1027 aa12.07□□□□□ -0.48
CPT1A-206ENST00000540367 CBWD6Q4V339 395 aa12.07□□□□□ -0.48
CPT1A-206ENST00000540367 PRR16Q569H4 304 aa12.07□□□□□ -0.48
CPT1A-206ENST00000540367 CBWD3Q5JTY5 395 aa12.07□□□□□ -0.48
CPT1A-206ENST00000540367 CBWD5Q5RIA9 395 aa12.07□□□□□ -0.48
CPT1A-206ENST00000540367 TRMT10CQ7L0Y3 403 aaKnown RBP12.07□□□□□ -0.48
CPT1A-206ENST00000540367 BZW1Q7L1Q6 419 aaKnown RBP12.07□□□□□ -0.48
CPT1A-206ENST00000540367 KLHL29Q96CT2 875 aa12.07□□□□□ -0.48
CPT1A-206ENST00000540367 PLCD4Q9BRC7 762 aa12.07□□□□□ -0.48
CPT1A-206ENST00000540367 CTTNBP2NLQ9P2B4 639 aa12.07□□□□□ -0.48
CPT1A-206ENST00000540367 GGT7Q9UJ14 662 aa12.07□□□□□ -0.48
CPT1A-206ENST00000540367 PCDHAC2Q9Y5I4 1007 aa12.07□□□□□ -0.48
CPT1A-206ENST00000540367 GREB1LQ9C091 1923 aaPredicted RBP12.07□□□□□ -0.48
CPT1A-206ENST00000540367 PCNTO95613 3336 aa12.07□□□□□ -0.48
CPT1A-206ENST00000540367 PASKQ96RG2 1323 aa12.07□□□□□ -0.48
CPT1A-206ENST00000540367 ANKRD63C9JTQ0 380 aa12.06□□□□□ -0.48
CPT1A-206ENST00000540367 EYA4O95677 639 aa12.06□□□□□ -0.48
CPT1A-206ENST00000540367 IL1R1P14778 569 aa12.06□□□□□ -0.48
CPT1A-206ENST00000540367 CACNB3P54284 484 aa12.06□□□□□ -0.48
CPT1A-206ENST00000540367 LRRC14Q15048 493 aa12.06□□□□□ -0.48
CPT1A-206ENST00000540367 QRICH1Q2TAL8 776 aa12.06□□□□□ -0.48
CPT1A-206ENST00000540367 LENG9Q96B70 501 aa12.06□□□□□ -0.48
CPT1A-206ENST00000540367 IFT74Q96LB3 600 aa12.06□□□□□ -0.48
CPT1A-206ENST00000540367 ZNF570Q96NI8 536 aa12.06□□□□□ -0.48
CPT1A-206ENST00000540367 RPS6KC1Q96S38 1066 aa12.06□□□□□ -0.48
CPT1A-206ENST00000540367 AGPAT1Q99943 283 aa12.06□□□□□ -0.48
CPT1A-206ENST00000540367 IKZF4Q9H2S9 585 aa12.06□□□□□ -0.48
CPT1A-206ENST00000540367 ARHGEF3Q9NR81 526 aa12.06□□□□□ -0.48
CPT1A-206ENST00000540367 RABGAP1Q9Y3P9 1069 aa12.06□□□□□ -0.48
CPT1A-206ENST00000540367 PCDHA1Q9Y5I3 950 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms