RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 GLRA2P23416 452 aa12.88□□□□□ -0.35
VTN-202ENST00000539746 CTGFP29279 349 aa12.88□□□□□ -0.35
VTN-202ENST00000539746 NMT1P30419 496 aaKnown RBP12.88□□□□□ -0.35
VTN-202ENST00000539746 PTENP60484 403 aa12.88□□□□□ -0.35
VTN-202ENST00000539746 DCAF4L1Q3SXM0 396 aa12.88□□□□□ -0.35
VTN-202ENST00000539746 CD302Q8IX05 232 aa12.88□□□□□ -0.35
VTN-202ENST00000539746 TXLNBQ8N3L3 684 aa12.88□□□□□ -0.35
VTN-202ENST00000539746 ANKLE1Q8NAG6 615 aa12.88□□□□□ -0.35
VTN-202ENST00000539746 KLHDC9Q8NEP7 349 aa12.88□□□□□ -0.35
VTN-202ENST00000539746 LMBR1Q8WVP7 490 aa12.88□□□□□ -0.35
VTN-202ENST00000539746 RSPH1Q8WYR4 309 aa12.88□□□□□ -0.35
VTN-202ENST00000539746 TCHPQ9BT92 498 aa12.88□□□□□ -0.35
VTN-202ENST00000539746 EDEM3Q9BZQ6 932 aa12.88□□□□□ -0.35
VTN-202ENST00000539746 SEMA6BQ9H3T3 888 aa12.88□□□□□ -0.35
VTN-202ENST00000539746 ZNHIT6Q9NWK9 470 aaKnown RBP12.88□□□□□ -0.35
VTN-202ENST00000539746 IFNKQ9P0W0 207 aa12.88□□□□□ -0.35
VTN-202ENST00000539746 SQORQ9Y6N5 450 aa12.88□□□□□ -0.35
VTN-202ENST00000539746 INO80B-WBP1J3KQ70 363 aa12.87□□□□□ -0.35
VTN-202ENST00000539746 CCP110O43303 1012 aa12.87□□□□□ -0.35
VTN-202ENST00000539746 ECM2O94769 699 aaPredicted RBP12.87□□□□□ -0.35
VTN-202ENST00000539746 ASGR1P07306 291 aa12.87□□□□□ -0.35
VTN-202ENST00000539746 SKIP12755 728 aa12.87□□□□□ -0.35
VTN-202ENST00000539746 CRYBB1P53674 252 aaPredicted RBP12.87□□□□□ -0.35
VTN-202ENST00000539746 UBXN1Q04323 297 aa12.87□□□□□ -0.35
VTN-202ENST00000539746 PTK7Q13308 1070 aa12.87□□□□□ -0.35
VTN-202ENST00000539746 CAPSQ13938 189 aa12.87□□□□□ -0.35
VTN-202ENST00000539746 LRRC41Q15345 812 aa12.87□□□□□ -0.35
VTN-202ENST00000539746 VWA3BQ502W6 1294 aa12.87□□□□□ -0.35
VTN-202ENST00000539746 CEP135Q66GS9 1140 aa12.87□□□□□ -0.35
VTN-202ENST00000539746 GPD1LQ8N335 351 aa12.87□□□□□ -0.35
VTN-202ENST00000539746 TMC2Q8TDI7 906 aa12.87□□□□□ -0.35
VTN-202ENST00000539746 PDLIM2Q96JY6 352 aa12.87□□□□□ -0.35
VTN-202ENST00000539746 NLRP4Q96MN2 994 aa12.87□□□□□ -0.35
VTN-202ENST00000539746 FNBP1Q96RU3 617 aa12.87□□□□□ -0.35
VTN-202ENST00000539746 CEP89Q96ST8 783 aa12.87□□□□□ -0.35
VTN-202ENST00000539746 BCAS3Q9H6U6 928 aa12.87□□□□□ -0.35
VTN-202ENST00000539746 GTF2IRD1Q9UHL9 959 aa12.87□□□□□ -0.35
VTN-202ENST00000539746 A0A087WWV3 80 aa12.86□□□□□ -0.35
VTN-202ENST00000539746 ZBTB42B2RXF5 422 aa12.86□□□□□ -0.35
VTN-202ENST00000539746 PMM2O15305 246 aa12.86□□□□□ -0.35
VTN-202ENST00000539746 EXTL3O43909 919 aa12.86□□□□□ -0.35
VTN-202ENST00000539746 IL18RAPO95256 599 aa12.86□□□□□ -0.35
VTN-202ENST00000539746 AFPP02771 609 aaKnown RBP12.86□□□□□ -0.35
VTN-202ENST00000539746 SRGAP2CP0DJJ0 459 aa12.86□□□□□ -0.35
VTN-202ENST00000539746 HOXC8P31273 242 aa12.86□□□□□ -0.35
VTN-202ENST00000539746 ACLYP53396 1101 aa12.86□□□□□ -0.35
VTN-202ENST00000539746 COPB1P53618 953 aaKnown RBP12.86□□□□□ -0.35
VTN-202ENST00000539746 BFSP2Q13515 415 aa12.86□□□□□ -0.35
VTN-202ENST00000539746 KRT31Q15323 416 aa12.86□□□□□ -0.35
VTN-202ENST00000539746 KCNA10Q16322 511 aa12.86□□□□□ -0.35
VTN-202ENST00000539746 FAM47CQ5HY64 1035 aa12.86□□□□□ -0.35
VTN-202ENST00000539746 FIGNQ5HY92 759 aa12.86□□□□□ -0.35
VTN-202ENST00000539746 GJC2Q5T442 439 aaPredicted RBP12.86□□□□□ -0.35
VTN-202ENST00000539746 LRRC55Q6ZSA7 311 aa12.86□□□□□ -0.35
VTN-202ENST00000539746 TSHZ1Q6ZSZ6 1077 aa12.86□□□□□ -0.35
VTN-202ENST00000539746 NT5DC4Q86YG4 428 aa12.86□□□□□ -0.35
VTN-202ENST00000539746 TRPV1Q8NER1 839 aa12.86□□□□□ -0.35
VTN-202ENST00000539746 PCMTD1Q96MG8 357 aaPredicted RBP12.86□□□□□ -0.35
VTN-202ENST00000539746 FIZ1Q96SL8 496 aa12.86□□□□□ -0.35
VTN-202ENST00000539746 DUSP9Q99956 384 aaKnown RBP12.86□□□□□ -0.35
VTN-202ENST00000539746 MSTO1Q9BUK6 570 aa12.86□□□□□ -0.35
VTN-202ENST00000539746 NAA15Q9BXJ9 866 aaKnown RBP12.86□□□□□ -0.35
VTN-202ENST00000539746 XPO4Q9C0E2 1151 aaKnown RBP12.86□□□□□ -0.35
VTN-202ENST00000539746 NDST4Q9H3R1 872 aa12.86□□□□□ -0.35
VTN-202ENST00000539746 GPRC5CQ9NQ84 441 aa12.86□□□□□ -0.35
VTN-202ENST00000539746 RTN4Q9NQC3 1192 aaKnown RBP12.86□□□□□ -0.35
VTN-202ENST00000539746 STARD7Q9NQZ5 370 aa12.86□□□□□ -0.35
VTN-202ENST00000539746 TOPORSQ9NS56 1045 aaPredicted RBP12.86□□□□□ -0.35
VTN-202ENST00000539746 DMAC2Q9NW81 257 aa12.86□□□□□ -0.35
VTN-202ENST00000539746 HSPBP1Q9NZL4 362 aa12.86□□□□□ -0.35
VTN-202ENST00000539746 TNFSF13BQ9Y275 285 aa12.86□□□□□ -0.35
VTN-202ENST00000539746 PTCH2Q9Y6C5 1203 aa12.86□□□□□ -0.35
VTN-202ENST00000539746 STYXL1Q9Y6J8 313 aa12.86□□□□□ -0.35
VTN-202ENST00000539746 CNTNAP2Q9UHC6 1331 aa12.86□□□□□ -0.35
VTN-202ENST00000539746 GPR182O15218 404 aa12.85□□□□□ -0.35
VTN-202ENST00000539746 XPOTO43592 962 aaKnown RBP12.85□□□□□ -0.35
VTN-202ENST00000539746 PGK1P00558 417 aa12.85□□□□□ -0.35
VTN-202ENST00000539746 MCF2P10911 925 aa12.85□□□□□ -0.35
VTN-202ENST00000539746 TRIM21P19474 475 aaKnown RBP12.85□□□□□ -0.35
VTN-202ENST00000539746 YARSP54577 528 aaKnown RBP12.85□□□□□ -0.35
VTN-202ENST00000539746 CHMP4BP1P59074 171 aa12.85□□□□□ -0.35
VTN-202ENST00000539746 ITGA7Q13683 1181 aa12.85□□□□□ -0.35
VTN-202ENST00000539746 NOLC1Q14978 699 aaKnown RBP eCLIP12.85□□□□□ -0.355e-27■□□□□ 9.3
VTN-202ENST00000539746 TCERG1LQ5VWI1 586 aa12.85□□□□□ -0.35
VTN-202ENST00000539746 NOTUMQ6P988 496 aa12.85□□□□□ -0.35
VTN-202ENST00000539746 MPZL3Q6UWV2 235 aa12.85□□□□□ -0.35
VTN-202ENST00000539746 LINC01465Q8N7H1 131 aa12.85□□□□□ -0.35
VTN-202ENST00000539746 CAGE1Q8TC20 777 aa12.85□□□□□ -0.35
VTN-202ENST00000539746 KAT2BQ92831 832 aa12.85□□□□□ -0.35
VTN-202ENST00000539746 TMEM106CQ9BVX2 250 aa12.85□□□□□ -0.35
VTN-202ENST00000539746 IMPG2Q9BZV3 1241 aa12.85□□□□□ -0.35
VTN-202ENST00000539746 FZD8Q9H461 694 aa12.85□□□□□ -0.35
VTN-202ENST00000539746 CHST12Q9NRB3 414 aa12.85□□□□□ -0.35
VTN-202ENST00000539746 SAMSN1Q9NSI8 373 aaKnown RBP12.85□□□□□ -0.35
VTN-202ENST00000539746 SETD4Q9NVD3 440 aa12.85□□□□□ -0.35
VTN-202ENST00000539746 AGO2Q9UKV8 859 aaKnown RBP12.85□□□□□ -0.35
VTN-202ENST00000539746 PHF24Q9UPV7 400 aa12.85□□□□□ -0.35
VTN-202ENST00000539746 TMEM150BA6NC51 233 aa12.84□□□□□ -0.35
VTN-202ENST00000539746 TRIM49BA6NDI0 452 aa12.84□□□□□ -0.35
VTN-202ENST00000539746 OGTO15294 1046 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms