RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 KCNQ5Q9NR82 932 aa14.29□□□□□ -0.12
UBE3B-209ENST00000539584 HOMER3Q9NSC5 361 aa14.29□□□□□ -0.12
UBE3B-209ENST00000539584 GRHL1Q9NZI5 618 aa14.29□□□□□ -0.12
UBE3B-209ENST00000539584 RGL1Q9NZL6 768 aa14.29□□□□□ -0.12
UBE3B-209ENST00000539584 CTTNBP2NLQ9P2B4 639 aa14.29□□□□□ -0.12
UBE3B-209ENST00000539584 ZNF536O15090 1300 aa14.29□□□□□ -0.12
UBE3B-209ENST00000539584 PASKQ96RG2 1323 aa14.29□□□□□ -0.12
UBE3B-209ENST00000539584 IGSF9BQ9UPX0 1349 aa14.29□□□□□ -0.12
UBE3B-209ENST00000539584 EML1O00423 815 aa14.29□□□□□ -0.12
UBE3B-209ENST00000539584 EXOC3O60645 756 aa14.29□□□□□ -0.12
UBE3B-209ENST00000539584 BMP3P12645 472 aa14.29□□□□□ -0.12
UBE3B-209ENST00000539584 PDE6CP51160 858 aa14.29□□□□□ -0.12
UBE3B-209ENST00000539584 MCCD1P59942 119 aaPredicted RBP14.29□□□□□ -0.12
UBE3B-209ENST00000539584 PDE4CQ08493 712 aa14.29□□□□□ -0.12
UBE3B-209ENST00000539584 LRCH2Q5VUJ6 765 aa14.29□□□□□ -0.12
UBE3B-209ENST00000539584 MSL1Q68DK7 614 aa14.29□□□□□ -0.12
UBE3B-209ENST00000539584 PRELID2Q8N945 189 aa14.29□□□□□ -0.12
UBE3B-209ENST00000539584 LMO3Q8TAP4 145 aa14.29□□□□□ -0.12
UBE3B-209ENST00000539584 CCHCR1Q8TD31 782 aa14.29□□□□□ -0.12
UBE3B-209ENST00000539584 ALG3Q92685 438 aa14.29□□□□□ -0.12
UBE3B-209ENST00000539584 RNF25Q96BH1 459 aaPredicted RBP14.29□□□□□ -0.12
UBE3B-209ENST00000539584 CXorf56Q9H5V9 222 aa14.29□□□□□ -0.12
UBE3B-209ENST00000539584 ERVK-5Q9HDB9 667 aa14.29□□□□□ -0.12
UBE3B-209ENST00000539584 SLC12A4Q9UP95 1085 aa14.29□□□□□ -0.12
UBE3B-209ENST00000539584 SNX24Q9Y343 169 aa14.29□□□□□ -0.12
UBE3B-209ENST00000539584 RPTORQ8N122 1335 aa14.28□□□□□ -0.12
UBE3B-209ENST00000539584 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.28□□□□□ -0.12
UBE3B-209ENST00000539584 FOXN3O00409 490 aaPredicted RBP14.28□□□□□ -0.12
UBE3B-209ENST00000539584 FTLP02792 175 aaPredicted RBP14.28□□□□□ -0.12
UBE3B-209ENST00000539584 PEX5P50542 639 aa14.28□□□□□ -0.12
UBE3B-209ENST00000539584 ODR4Q5SWX8 454 aa14.28□□□□□ -0.12
UBE3B-209ENST00000539584 PHLDB3Q6NSJ2 640 aa14.28□□□□□ -0.12
UBE3B-209ENST00000539584 CCDC137Q6PK04 289 aaKnown RBP14.28□□□□□ -0.12
UBE3B-209ENST00000539584 SYDE1Q6ZW31 735 aaPredicted RBP14.28□□□□□ -0.12
UBE3B-209ENST00000539584 TPH2Q8IWU9 490 aa14.28□□□□□ -0.12
UBE3B-209ENST00000539584 GLG1Q92896 1179 aa14.28□□□□□ -0.12
UBE3B-209ENST00000539584 ART4Q93070 314 aa14.28□□□□□ -0.12
UBE3B-209ENST00000539584 ADAM7Q9H2U9 754 aa14.28□□□□□ -0.12
UBE3B-209ENST00000539584 COG5Q9UP83 839 aa14.28□□□□□ -0.12
UBE3B-209ENST00000539584 PCDHA3Q9Y5H8 950 aa14.28□□□□□ -0.12
UBE3B-209ENST00000539584 RASGRF2O14827 1237 aa14.27□□□□□ -0.12
UBE3B-209ENST00000539584 RIPK2O43353 540 aa14.27□□□□□ -0.12
UBE3B-209ENST00000539584 RAD21O60216 631 aa14.27□□□□□ -0.12
UBE3B-209ENST00000539584 SHBGP04278 402 aa14.27□□□□□ -0.12
UBE3B-209ENST00000539584 MAN1A1P33908 653 aa14.27□□□□□ -0.12
UBE3B-209ENST00000539584 CRKP46108 304 aa14.27□□□□□ -0.12
UBE3B-209ENST00000539584 ZC2HC1CQ53FD0 456 aaPredicted RBP14.27□□□□□ -0.12
UBE3B-209ENST00000539584 SIAH1Q8IUQ4 282 aa14.27□□□□□ -0.12
UBE3B-209ENST00000539584 PROCA1Q8NCQ7 364 aaPredicted RBP14.27□□□□□ -0.12
UBE3B-209ENST00000539584 PIGOQ8TEQ8 1089 aa14.27□□□□□ -0.12
UBE3B-209ENST00000539584 MAIP1Q8WWC4 291 aa14.27□□□□□ -0.12
UBE3B-209ENST00000539584 DYDC2Q96IM9 177 aa14.27□□□□□ -0.12
UBE3B-209ENST00000539584 UIMC1Q96RL1 719 aa14.27□□□□□ -0.12
UBE3B-209ENST00000539584 CD248Q9HCU0 757 aa14.27□□□□□ -0.12
UBE3B-209ENST00000539584 SEPT11Q9NVA2 429 aaKnown RBP14.27□□□□□ -0.12
UBE3B-209ENST00000539584 UVRAGQ9P2Y5 699 aa14.27□□□□□ -0.12
UBE3B-209ENST00000539584 MCM8Q9UJA3 840 aa14.27□□□□□ -0.12
UBE3B-209ENST00000539584 SPATA31A6Q5VVP1 1343 aa14.27□□□□□ -0.13
UBE3B-209ENST00000539584 A0A1B0GUA9 196 aa14.27□□□□□ -0.13
UBE3B-209ENST00000539584 SFI1A8K8P3 1242 aa14.27□□□□□ -0.13
UBE3B-209ENST00000539584 NDUFB10O96000 172 aa14.27□□□□□ -0.13
UBE3B-209ENST00000539584 NF2P35240 595 aa14.27□□□□□ -0.13
UBE3B-209ENST00000539584 IKQ13123 557 aaPredicted RBP14.27□□□□□ -0.13
UBE3B-209ENST00000539584 PODNQ7Z5L7 613 aa14.27□□□□□ -0.13
UBE3B-209ENST00000539584 SYCP3Q8IZU3 236 aa14.27□□□□□ -0.13
UBE3B-209ENST00000539584 SLC17A8Q8NDX2 589 aa14.27□□□□□ -0.13
UBE3B-209ENST00000539584 MDM1Q8TC05 714 aa14.27□□□□□ -0.13
UBE3B-209ENST00000539584 CD101Q93033 1021 aa14.27□□□□□ -0.13
UBE3B-209ENST00000539584 SERPINB12Q96P63 405 aa14.27□□□□□ -0.13
UBE3B-209ENST00000539584 IWS1Q96ST2 819 aa14.27□□□□□ -0.13
UBE3B-209ENST00000539584 SELENOSQ9BQE4 189 aa14.27□□□□□ -0.13
UBE3B-209ENST00000539584 LRRC19Q9H756 370 aa14.27□□□□□ -0.13
UBE3B-209ENST00000539584 HAUS2Q9NVX0 235 aa14.27□□□□□ -0.13
UBE3B-209ENST00000539584 WHRNQ9P202 907 aa14.27□□□□□ -0.13
UBE3B-209ENST00000539584 LARSQ9P2J5 1176 aaKnown RBP14.27□□□□□ -0.13
UBE3B-209ENST00000539584 OPLAHO14841 1288 aa14.26□□□□□ -0.13
UBE3B-209ENST00000539584 KIF1CO43896 1103 aaKnown RBP14.26□□□□□ -0.13
UBE3B-209ENST00000539584 GAS7O60861 476 aa14.26□□□□□ -0.13
UBE3B-209ENST00000539584 COILP38432 576 aaPredicted RBP14.26□□□□□ -0.13
UBE3B-209ENST00000539584 RPL21P46778 160 aaKnown RBP14.26□□□□□ -0.13
UBE3B-209ENST00000539584 CYP2J2P51589 502 aa14.26□□□□□ -0.13
UBE3B-209ENST00000539584 CAV1Q03135 178 aa14.26□□□□□ -0.13
UBE3B-209ENST00000539584 LMNB2Q03252 620 aa14.26□□□□□ -0.13
UBE3B-209ENST00000539584 NFIAQ12857 509 aa14.26□□□□□ -0.13
UBE3B-209ENST00000539584 CALCOCO2Q13137 446 aa14.26□□□□□ -0.13
UBE3B-209ENST00000539584 ZNF211Q13398 564 aaPredicted RBP14.26□□□□□ -0.13
UBE3B-209ENST00000539584 ARHGAP44Q17R89 818 aa14.26□□□□□ -0.13
UBE3B-209ENST00000539584 ABCB5Q2M3G0 1257 aa14.26□□□□□ -0.13
UBE3B-209ENST00000539584 USH1GQ495M9 461 aa14.26□□□□□ -0.13
UBE3B-209ENST00000539584 TRPM8Q7Z2W7 1104 aa14.26□□□□□ -0.13
UBE3B-209ENST00000539584 SLC13A5Q86YT5 568 aaPredicted RBP14.26□□□□□ -0.13
UBE3B-209ENST00000539584 C18orf8Q96DM3 657 aa14.26□□□□□ -0.13
UBE3B-209ENST00000539584 TMX4Q9H1E5 349 aaPredicted RBP14.26□□□□□ -0.13
UBE3B-209ENST00000539584 AZI2Q9H6S1 392 aa14.26□□□□□ -0.13
UBE3B-209ENST00000539584 RIMBP2O15034 1052 aa14.25□□□□□ -0.13
UBE3B-209ENST00000539584 VAMP7P51809 220 aa14.25□□□□□ -0.13
UBE3B-209ENST00000539584 MKRN3Q13064 507 aaKnown RBP14.25□□□□□ -0.13
UBE3B-209ENST00000539584 EPC2Q52LR7 807 aa14.25□□□□□ -0.13
UBE3B-209ENST00000539584 CCDC105Q8IYK2 499 aa14.25□□□□□ -0.13
UBE3B-209ENST00000539584 TIPINQ9BVW5 301 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms