RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 NOL7Q9UMY1 257 aaKnown RBP21.19■□□□□ 0.98
TNFRSF1A-212ENST00000539372 ST18O60284 1047 aa21.18■□□□□ 0.98
TNFRSF1A-212ENST00000539372 EYA4O95677 639 aa21.18■□□□□ 0.98
TNFRSF1A-212ENST00000539372 COL9A1P20849 921 aa21.18■□□□□ 0.98
TNFRSF1A-212ENST00000539372 CA8P35219 290 aa21.18■□□□□ 0.98
TNFRSF1A-212ENST00000539372 AFF1P51825 1210 aaKnown RBP21.18■□□□□ 0.98
TNFRSF1A-212ENST00000539372 MBTD1Q05BQ5 628 aa21.18■□□□□ 0.98
TNFRSF1A-212ENST00000539372 COASYQ13057 564 aa21.18■□□□□ 0.98
TNFRSF1A-212ENST00000539372 LLGL2Q6P1M3 1020 aa21.18■□□□□ 0.98
TNFRSF1A-212ENST00000539372 MRPL10Q7Z7H8 261 aaKnown RBP21.18■□□□□ 0.98
TNFRSF1A-212ENST00000539372 SMRP1Q8NCR6 262 aa21.18■□□□□ 0.98
TNFRSF1A-212ENST00000539372 ERMNQ8TAM6 284 aa21.18■□□□□ 0.98
TNFRSF1A-212ENST00000539372 URGCPQ8TCY9 931 aa21.18■□□□□ 0.98
TNFRSF1A-212ENST00000539372 TMEM169Q96HH4 297 aa21.18■□□□□ 0.98
TNFRSF1A-212ENST00000539372 POLR3CQ9BUI4 534 aaPredicted RBP21.18■□□□□ 0.98
TNFRSF1A-212ENST00000539372 EIF2AQ9BY44 585 aaKnown RBP21.18■□□□□ 0.98
TNFRSF1A-212ENST00000539372 RSAD1Q9HA92 442 aa21.18■□□□□ 0.98
TNFRSF1A-212ENST00000539372 DNAJB4Q9UDY4 337 aa21.18■□□□□ 0.98
TNFRSF1A-212ENST00000539372 RAPGEFL1Q9UHV5 662 aa21.18■□□□□ 0.98
TNFRSF1A-212ENST00000539372 FAM86C2PA6NEL3 165 aa21.17■□□□□ 0.98
TNFRSF1A-212ENST00000539372 PI4K2BG5E9Z4 385 aa21.17■□□□□ 0.98
TNFRSF1A-212ENST00000539372 B4GALT3O60512 393 aa21.17■□□□□ 0.98
TNFRSF1A-212ENST00000539372 U2AF2P26368 475 aaKnown RBP eCLIP21.17■□□□□ 0.98
TNFRSF1A-212ENST00000539372 TRAPPC10P48553 1259 aa21.17■□□□□ 0.98
TNFRSF1A-212ENST00000539372 ZNF280BQ86YH2 543 aa21.17■□□□□ 0.98
TNFRSF1A-212ENST00000539372 C4orf32Q8N8J7 132 aa21.17■□□□□ 0.98
TNFRSF1A-212ENST00000539372 SMG8Q8ND04 991 aaKnown RBP21.17■□□□□ 0.98
TNFRSF1A-212ENST00000539372 RSPH1Q8WYR4 309 aa21.17■□□□□ 0.98
TNFRSF1A-212ENST00000539372 NACC1Q96RE7 527 aa21.17■□□□□ 0.98
TNFRSF1A-212ENST00000539372 DBR1Q9UK59 544 aaKnown RBP21.17■□□□□ 0.98
TNFRSF1A-212ENST00000539372 C19orf67A6NJJ6 358 aa21.16■□□□□ 0.98
TNFRSF1A-212ENST00000539372 CD2BP2O95400 341 aaKnown RBP21.16■□□□□ 0.98
TNFRSF1A-212ENST00000539372 GALTP07902 379 aa21.16■□□□□ 0.98
TNFRSF1A-212ENST00000539372 NCLP19338 710 aaKnown RBP21.16■□□□□ 0.98
TNFRSF1A-212ENST00000539372 RPA1P27694 616 aa21.16■□□□□ 0.98
TNFRSF1A-212ENST00000539372 SLC11A1P49279 550 aa21.16■□□□□ 0.98
TNFRSF1A-212ENST00000539372 TOB1P50616 345 aaPredicted RBP21.16■□□□□ 0.98
TNFRSF1A-212ENST00000539372 POU5F1BQ06416 359 aa21.16■□□□□ 0.98
TNFRSF1A-212ENST00000539372 SMC1AQ14683 1233 aaKnown RBP21.16■□□□□ 0.98
TNFRSF1A-212ENST00000539372 PCBP1Q15365 356 aaKnown RBP eCLIP21.16■□□□□ 0.98
TNFRSF1A-212ENST00000539372 AMHR2Q16671 573 aa21.16■□□□□ 0.98
TNFRSF1A-212ENST00000539372 NOTUMQ6P988 496 aa21.16■□□□□ 0.98
TNFRSF1A-212ENST00000539372 IFNLR1Q8IU57 520 aaPredicted RBP21.16■□□□□ 0.98
TNFRSF1A-212ENST00000539372 VPS52Q8N1B4 723 aa21.16■□□□□ 0.98
TNFRSF1A-212ENST00000539372 BCL7CQ8WUZ0 217 aaPredicted RBP21.16■□□□□ 0.98
TNFRSF1A-212ENST00000539372 RNF39Q9H2S5 420 aa21.16■□□□□ 0.98
TNFRSF1A-212ENST00000539372 UPF2Q9HAU5 1272 aaKnown RBP21.16■□□□□ 0.98
TNFRSF1A-212ENST00000539372 USP15Q9Y4E8 981 aaPredicted RBP21.16■□□□□ 0.98
TNFRSF1A-212ENST00000539372 HES2Q9Y543 173 aa21.16■□□□□ 0.98
TNFRSF1A-212ENST00000539372 IPPQ9Y573 584 aa21.16■□□□□ 0.98
TNFRSF1A-212ENST00000539372 PCDHB6Q9Y5E3 794 aa21.16■□□□□ 0.98
TNFRSF1A-212ENST00000539372 CNTNAP2Q9UHC6 1331 aa21.15■□□□□ 0.98
TNFRSF1A-212ENST00000539372 FSD2A1L4K1 749 aa21.15■□□□□ 0.98
TNFRSF1A-212ENST00000539372 C2orf71A6NGG8 1288 aa21.15■□□□□ 0.98
TNFRSF1A-212ENST00000539372 LRRIQ4A6NIV6 560 aa21.15■□□□□ 0.98
TNFRSF1A-212ENST00000539372 B4GALT5O43286 388 aa21.15■□□□□ 0.98
TNFRSF1A-212ENST00000539372 DDHD2O94830 711 aa21.15■□□□□ 0.98
TNFRSF1A-212ENST00000539372 POMCP01189 267 aa21.15■□□□□ 0.98
TNFRSF1A-212ENST00000539372 ITGA4P13612 1032 aa21.15■□□□□ 0.98
TNFRSF1A-212ENST00000539372 ARF4P18085 180 aaPredicted RBP21.15■□□□□ 0.98
TNFRSF1A-212ENST00000539372 AXLP30530 894 aa21.15■□□□□ 0.98
TNFRSF1A-212ENST00000539372 NCBP1Q09161 790 aaKnown RBP21.15■□□□□ 0.98
TNFRSF1A-212ENST00000539372 PADI6Q6TGC4 694 aa21.15■□□□□ 0.98
TNFRSF1A-212ENST00000539372 CDR2LQ86X02 465 aaPredicted RBP21.15■□□□□ 0.98
TNFRSF1A-212ENST00000539372 MRPL43Q8N983 215 aaKnown RBP21.15■□□□□ 0.98
TNFRSF1A-212ENST00000539372 MCPH1Q8NEM0 835 aa21.15■□□□□ 0.98
TNFRSF1A-212ENST00000539372 AUTS2Q8WXX7 1259 aa21.15■□□□□ 0.98
TNFRSF1A-212ENST00000539372 IGSF21Q96ID5 467 aa21.15■□□□□ 0.98
TNFRSF1A-212ENST00000539372 TMX3Q96JJ7 454 aa21.15■□□□□ 0.98
TNFRSF1A-212ENST00000539372 APOL6Q9BWW8 343 aa21.15■□□□□ 0.98
TNFRSF1A-212ENST00000539372 APOL5Q9BWW9 433 aa21.15■□□□□ 0.98
TNFRSF1A-212ENST00000539372 CSRNP2Q9H175 543 aa21.15■□□□□ 0.98
TNFRSF1A-212ENST00000539372 C5orf42Q9H799 3197 aa21.14■□□□□ 0.98
TNFRSF1A-212ENST00000539372 ARHGEF35A5YM69 484 aa21.14■□□□□ 0.97
TNFRSF1A-212ENST00000539372 CXCL14O95715 111 aa21.14■□□□□ 0.97
TNFRSF1A-212ENST00000539372 CCT6AP40227 531 aaKnown RBP21.14■□□□□ 0.97
TNFRSF1A-212ENST00000539372 FXR2P51116 673 aaKnown RBP eCLIP21.14■□□□□ 0.97
TNFRSF1A-212ENST00000539372 PTGDRQ13258 359 aa21.14■□□□□ 0.97
TNFRSF1A-212ENST00000539372 KCNC3Q14003 757 aa21.14■□□□□ 0.97
TNFRSF1A-212ENST00000539372 ECM1Q16610 540 aa21.14■□□□□ 0.97
TNFRSF1A-212ENST00000539372 TMEM31Q5JXX7 168 aa21.14■□□□□ 0.97
TNFRSF1A-212ENST00000539372 HAUS3Q68CZ6 603 aa21.14■□□□□ 0.97
TNFRSF1A-212ENST00000539372 MCTP1Q6DN14 999 aa21.14■□□□□ 0.97
TNFRSF1A-212ENST00000539372 CCDC51Q96ER9 411 aa21.14■□□□□ 0.97
TNFRSF1A-212ENST00000539372 FAM193BQ96PV7 902 aaPredicted RBP21.14■□□□□ 0.97
TNFRSF1A-212ENST00000539372 POP1Q99575 1024 aaKnown RBP21.14■□□□□ 0.97
TNFRSF1A-212ENST00000539372 LRFN3Q9BTN0 628 aa21.14■□□□□ 0.97
TNFRSF1A-212ENST00000539372 NFKBIZQ9BYH8 718 aa21.14■□□□□ 0.97
TNFRSF1A-212ENST00000539372 ZBP1Q9H171 429 aa21.14■□□□□ 0.97
TNFRSF1A-212ENST00000539372 C11orf16Q9NQ32 467 aa21.14■□□□□ 0.97
TNFRSF1A-212ENST00000539372 SRGAP2BP0DMP2 458 aa21.13■□□□□ 0.97
TNFRSF1A-212ENST00000539372 BMS1Q14692 1282 aaKnown RBP21.13■□□□□ 0.97
TNFRSF1A-212ENST00000539372 ANKRD54Q6NXT1 300 aa21.13■□□□□ 0.97
TNFRSF1A-212ENST00000539372 TMEM184AQ6ZMB5 413 aa21.13■□□□□ 0.97
TNFRSF1A-212ENST00000539372 DDX53Q86TM3 631 aaKnown RBP21.13■□□□□ 0.97
TNFRSF1A-212ENST00000539372 CNNM3Q8NE01 707 aa21.13■□□□□ 0.97
TNFRSF1A-212ENST00000539372 BSNDQ8WZ55 320 aa21.13■□□□□ 0.97
TNFRSF1A-212ENST00000539372 GAD1Q99259 594 aa21.13■□□□□ 0.97
TNFRSF1A-212ENST00000539372 TRIM6Q9C030 488 aaPredicted RBP21.13■□□□□ 0.97
TNFRSF1A-212ENST00000539372 KANSL3Q9P2N6 904 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms