RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 TBC1D22BQ9NU19 505 aa13.61□□□□□ -0.23
YBX3-207ENST00000539204 GABBR1Q9UBS5 961 aa13.61□□□□□ -0.23
YBX3-207ENST00000539204 TCEAL9Q9UHQ7 104 aa13.61□□□□□ -0.23
YBX3-207ENST00000539204 MEIS3P2A8K0S8 358 aa13.6□□□□□ -0.23
YBX3-207ENST00000539204 E7EWF7 191 aa13.6□□□□□ -0.23
YBX3-207ENST00000539204 IPO5O00410 1097 aaKnown RBP13.6□□□□□ -0.23
YBX3-207ENST00000539204 LRP3O75074 770 aa13.6□□□□□ -0.23
YBX3-207ENST00000539204 PAPLNO95428 1278 aa13.6□□□□□ -0.23
YBX3-207ENST00000539204 C1RP00736 705 aa13.6□□□□□ -0.23
YBX3-207ENST00000539204 CENPBP07199 599 aaPredicted RBP13.6□□□□□ -0.23
YBX3-207ENST00000539204 RETP07949 1114 aa13.6□□□□□ -0.23
YBX3-207ENST00000539204 CYP21A2P08686 494 aa13.6□□□□□ -0.23
YBX3-207ENST00000539204 KCNA4P22459 653 aa13.6□□□□□ -0.23
YBX3-207ENST00000539204 SFPQP23246 707 aaKnown RBP eCLIP13.6□□□□□ -0.23
YBX3-207ENST00000539204 FSHRP23945 695 aa13.6□□□□□ -0.23
YBX3-207ENST00000539204 RAB27AP51159 221 aa13.6□□□□□ -0.23
YBX3-207ENST00000539204 ZNF746Q6NUN9 644 aaPredicted RBP13.6□□□□□ -0.23
YBX3-207ENST00000539204 TAS1R1Q7RTX1 841 aa13.6□□□□□ -0.23
YBX3-207ENST00000539204 TEX2Q8IWB9 1127 aa13.6□□□□□ -0.23
YBX3-207ENST00000539204 SMAP1Q8IYB5 467 aaPredicted RBP13.6□□□□□ -0.23
YBX3-207ENST00000539204 CELF5Q8N6W0 485 aaKnown RBP13.6□□□□□ -0.23
YBX3-207ENST00000539204 CLDN23Q96B33 292 aa13.6□□□□□ -0.23
YBX3-207ENST00000539204 PGBD1Q96JS3 809 aa13.6□□□□□ -0.23
YBX3-207ENST00000539204 INO80BQ9C086 356 aaPredicted RBP13.6□□□□□ -0.23
YBX3-207ENST00000539204 RXFP1Q9HBX9 757 aa13.6□□□□□ -0.23
YBX3-207ENST00000539204 RIC8AQ9NPQ8 531 aa13.6□□□□□ -0.23
YBX3-207ENST00000539204 FAM105AQ9NUU6 356 aa13.6□□□□□ -0.23
YBX3-207ENST00000539204 ZDHHC7Q9NXF8 308 aa13.6□□□□□ -0.23
YBX3-207ENST00000539204 PIN4Q9Y237 131 aaKnown RBP13.6□□□□□ -0.23
YBX3-207ENST00000539204 ANKRD11Q6UB99 2663 aaPredicted RBP13.6□□□□□ -0.23
YBX3-207ENST00000539204 B4GALT3O60512 393 aa13.59□□□□□ -0.23
YBX3-207ENST00000539204 RPS9P46781 194 aaKnown RBP13.59□□□□□ -0.23
YBX3-207ENST00000539204 LPAL2Q16609 132 aa13.59□□□□□ -0.23
YBX3-207ENST00000539204 LAIR1Q6GTX8 287 aa13.59□□□□□ -0.23
YBX3-207ENST00000539204 NFXL1Q6ZNB6 911 aa13.59□□□□□ -0.23
YBX3-207ENST00000539204 MTSS1LQ765P7 747 aa13.59□□□□□ -0.23
YBX3-207ENST00000539204 TMTC2Q8N394 836 aa13.59□□□□□ -0.23
YBX3-207ENST00000539204 ZNF577Q9BSK1 485 aa13.59□□□□□ -0.23
YBX3-207ENST00000539204 ANO3Q9BYT9 981 aa13.59□□□□□ -0.23
YBX3-207ENST00000539204 CDH7Q9ULB5 785 aa13.59□□□□□ -0.23
YBX3-207ENST00000539204 SAMM50Q9Y512 469 aa13.59□□□□□ -0.23
YBX3-207ENST00000539204 DOCK8Q8NF50 2099 aa13.59□□□□□ -0.23
YBX3-207ENST00000539204 FAM86B1E9PN63 330 aa13.58□□□□□ -0.24
YBX3-207ENST00000539204 TGM5O43548 720 aa13.58□□□□□ -0.24
YBX3-207ENST00000539204 FAM86B2P0C5J1 330 aa13.58□□□□□ -0.24
YBX3-207ENST00000539204 SREBF1P36956 1147 aa13.58□□□□□ -0.24
YBX3-207ENST00000539204 GLUD2P49448 558 aa13.58□□□□□ -0.24
YBX3-207ENST00000539204 ANTXR2P58335 489 aa13.58□□□□□ -0.24
YBX3-207ENST00000539204 PPP2R5DQ14738 602 aa13.58□□□□□ -0.24
YBX3-207ENST00000539204 PLEKHM2Q8IWE5 1019 aa13.58□□□□□ -0.24
YBX3-207ENST00000539204 HERC2P3Q9BVR0 1158 aa13.58□□□□□ -0.24
YBX3-207ENST00000539204 OSBPL3Q9H4L5 887 aa13.58□□□□□ -0.24
YBX3-207ENST00000539204 SEMA4GQ9NTN9 838 aa13.58□□□□□ -0.24
YBX3-207ENST00000539204 FAM217BQ9NTX9 383 aaPredicted RBP13.58□□□□□ -0.24
YBX3-207ENST00000539204 MRPS17Q9Y2R5 130 aaKnown RBP13.58□□□□□ -0.24
YBX3-207ENST00000539204 PCDHB2Q9Y5E7 798 aa13.58□□□□□ -0.24
YBX3-207ENST00000539204 PKD1L2Q7Z442 2459 aa13.57□□□□□ -0.24
YBX3-207ENST00000539204 FASNP49327 2511 aaKnown RBP13.57□□□□□ -0.24
YBX3-207ENST00000539204 MIA3Q5JRA6 1907 aa13.57□□□□□ -0.24
YBX3-207ENST00000539204 CCDC69A6NI79 296 aa13.57□□□□□ -0.24
YBX3-207ENST00000539204 FOXD2O60548 495 aaPredicted RBP13.57□□□□□ -0.24
YBX3-207ENST00000539204 POMCP01189 267 aa13.57□□□□□ -0.24
YBX3-207ENST00000539204 CALM1P0DP23 149 aa13.57□□□□□ -0.24
YBX3-207ENST00000539204 CALM2P0DP24 149 aa13.57□□□□□ -0.24
YBX3-207ENST00000539204 CALM3P0DP25 149 aa13.57□□□□□ -0.24
YBX3-207ENST00000539204 TARSP26639 723 aaKnown RBP13.57□□□□□ -0.24
YBX3-207ENST00000539204 PMLP29590 882 aa13.57□□□□□ -0.24
YBX3-207ENST00000539204 OR1G1P47890 313 aa13.57□□□□□ -0.24
YBX3-207ENST00000539204 DNM2P50570 870 aa13.57□□□□□ -0.24
YBX3-207ENST00000539204 NAPAP54920 295 aa13.57□□□□□ -0.24
YBX3-207ENST00000539204 SHC2P98077 582 aa13.57□□□□□ -0.24
YBX3-207ENST00000539204 DSG1Q02413 1049 aa13.57□□□□□ -0.24
YBX3-207ENST00000539204 MTAPQ13126 283 aa13.57□□□□□ -0.24
YBX3-207ENST00000539204 HDAC1Q13547 482 aaPredicted RBP13.57□□□□□ -0.24
YBX3-207ENST00000539204 CSRP2Q16527 193 aa13.57□□□□□ -0.24
YBX3-207ENST00000539204 N4BP2L1Q5TBK1 243 aaPredicted RBP13.57□□□□□ -0.24
YBX3-207ENST00000539204 IL31Q6EBC2 164 aa13.57□□□□□ -0.24
YBX3-207ENST00000539204 CASC1Q6TDU7 716 aa13.57□□□□□ -0.24
YBX3-207ENST00000539204 ZNF852Q6ZMS4 543 aa13.57□□□□□ -0.24
YBX3-207ENST00000539204 AGMOQ6ZNB7 445 aa13.57□□□□□ -0.24
YBX3-207ENST00000539204 PRR23BQ6ZRT6 265 aa13.57□□□□□ -0.24
YBX3-207ENST00000539204 CATSPER4Q7RTX7 472 aa13.57□□□□□ -0.24
YBX3-207ENST00000539204 RSAD1Q9HA92 442 aa13.57□□□□□ -0.24
YBX3-207ENST00000539204 PRMT8Q9NR22 394 aaPredicted RBP13.57□□□□□ -0.24
YBX3-207ENST00000539204 PRG3Q9Y2Y8 225 aaPredicted RBP13.57□□□□□ -0.24
YBX3-207ENST00000539204 CNOT1A5YKK6 2376 aaKnown RBP13.57□□□□□ -0.24
YBX3-207ENST00000539204 A0A087WZ62 844 aa13.56□□□□□ -0.24
YBX3-207ENST00000539204 SMCO2A6NFE2 343 aa13.56□□□□□ -0.24
YBX3-207ENST00000539204 NR1I2O75469 434 aa13.56□□□□□ -0.24
YBX3-207ENST00000539204 OATP04181 439 aa13.56□□□□□ -0.24
YBX3-207ENST00000539204 PROS1P07225 676 aa13.56□□□□□ -0.24
YBX3-207ENST00000539204 HOXB3P14651 431 aaPredicted RBP13.56□□□□□ -0.24
YBX3-207ENST00000539204 RXRAP19793 462 aa13.56□□□□□ -0.24
YBX3-207ENST00000539204 AFF1P51825 1210 aaKnown RBP13.56□□□□□ -0.24
YBX3-207ENST00000539204 ADCY7P51828 1080 aa13.56□□□□□ -0.24
YBX3-207ENST00000539204 ADCY1Q08828 1119 aa13.56□□□□□ -0.24
YBX3-207ENST00000539204 AP3B2Q13367 1082 aa13.56□□□□□ -0.24
YBX3-207ENST00000539204 LILRA6Q6PI73 481 aa13.56□□□□□ -0.24
YBX3-207ENST00000539204 PRR23CQ6ZRP0 262 aa13.56□□□□□ -0.24
YBX3-207ENST00000539204 GRASPQ7Z6J2 395 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms