RNA–Protein interactions for RNA: ENST00000539021.1

PPME1-205, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 2

Gene PPME1, Length 4,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-205ENST00000539021 USP40Q9NVE5 1235 aa9.37□□□□□ -0.91
PPME1-205ENST00000539021 ASIC3Q9UHC3 531 aa9.37□□□□□ -0.91
PPME1-205ENST00000539021 XIRP1Q702N8 1843 aaKnown RBP9.37□□□□□ -0.91
PPME1-205ENST00000539021 ZNF335Q9H4Z2 1342 aaPredicted RBP9.37□□□□□ -0.91
PPME1-205ENST00000539021 TGFB1I1O43294 461 aa9.37□□□□□ -0.91
PPME1-205ENST00000539021 CHMP2AO43633 222 aa9.37□□□□□ -0.91
PPME1-205ENST00000539021 EXOC3O60645 756 aa9.37□□□□□ -0.91
PPME1-205ENST00000539021 RARAP10276 462 aa9.37□□□□□ -0.91
PPME1-205ENST00000539021 GCKP35557 465 aa9.37□□□□□ -0.91
PPME1-205ENST00000539021 ZNF268Q14587 947 aaPredicted RBP9.37□□□□□ -0.91
PPME1-205ENST00000539021 USH1GQ495M9 461 aa9.37□□□□□ -0.91
PPME1-205ENST00000539021 TTC27Q6P3X3 843 aa9.37□□□□□ -0.91
PPME1-205ENST00000539021 STXBP4Q6ZWJ1 553 aa9.37□□□□□ -0.91
PPME1-205ENST00000539021 EXOC3L1Q86VI1 746 aa9.37□□□□□ -0.91
PPME1-205ENST00000539021 MICAL1Q8TDZ2 1067 aa9.37□□□□□ -0.91
PPME1-205ENST00000539021 RGL1Q9NZL6 768 aa9.37□□□□□ -0.91
PPME1-205ENST00000539021 PCYOX1Q9UHG3 505 aa9.37□□□□□ -0.91
PPME1-205ENST00000539021 GGA1Q9UJY5 639 aa9.37□□□□□ -0.91
PPME1-205ENST00000539021 STK24Q9Y6E0 443 aa9.37□□□□□ -0.91
PPME1-205ENST00000539021 PLIN4Q96Q06 1357 aa9.37□□□□□ -0.91
PPME1-205ENST00000539021 ECEL1O95672 775 aa9.37□□□□□ -0.91
PPME1-205ENST00000539021 COMTP21964 271 aa9.37□□□□□ -0.91
PPME1-205ENST00000539021 STX2P32856 288 aa9.37□□□□□ -0.91
PPME1-205ENST00000539021 AP3B2Q13367 1082 aa9.37□□□□□ -0.91
PPME1-205ENST00000539021 COG2Q14746 738 aa9.37□□□□□ -0.91
PPME1-205ENST00000539021 SPATA21Q7Z572 469 aa9.37□□□□□ -0.91
PPME1-205ENST00000539021 TPH2Q8IWU9 490 aa9.37□□□□□ -0.91
PPME1-205ENST00000539021 SLC20A1Q8WUM9 679 aa9.37□□□□□ -0.91
PPME1-205ENST00000539021 PLCD4Q9BRC7 762 aa9.37□□□□□ -0.91
PPME1-205ENST00000539021 TRIM7Q9C029 511 aa9.37□□□□□ -0.91
PPME1-205ENST00000539021 BCS1LQ9Y276 419 aa9.37□□□□□ -0.91
PPME1-205ENST00000539021 FOXN3O00409 490 aaPredicted RBP9.36□□□□□ -0.91
PPME1-205ENST00000539021 EYA4O95677 639 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 GGPS1O95749 300 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 MYCNP04198 464 aaPredicted RBP9.36□□□□□ -0.91
PPME1-205ENST00000539021 CCND1P24385 295 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 COILP38432 576 aaPredicted RBP9.36□□□□□ -0.91
PPME1-205ENST00000539021 GPC5P78333 572 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 GPSM2P81274 684 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 CETN1Q12798 172 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 CTTNQ14247 550 aaKnown RBP9.36□□□□□ -0.91
PPME1-205ENST00000539021 FAM178BQ8IXR5 827 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 ETNPPLQ8TBG4 499 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 TBC1D22AQ8WUA7 517 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 SPDL1Q96EA4 605 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 DDX23Q9BUQ8 820 aaKnown RBP9.36□□□□□ -0.91
PPME1-205ENST00000539021 TMEM109Q9BVC6 243 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 ROPN1BQ9BZX4 212 aaPredicted RBP9.36□□□□□ -0.91
PPME1-205ENST00000539021 ROPN1Q9HAT0 212 aaPredicted RBP9.36□□□□□ -0.91
PPME1-205ENST00000539021 PARVGQ9HBI0 331 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 UBE2TQ9NPD8 197 aaPredicted RBP9.36□□□□□ -0.91
PPME1-205ENST00000539021 DNAJC17Q9NVM6 304 aaKnown RBP9.36□□□□□ -0.91
PPME1-205ENST00000539021 KLHL14Q9P2G3 628 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 ARL2BPQ9Y2Y0 163 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 DAGLAQ9Y4D2 1042 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 CTDP1Q9Y5B0 961 aaPredicted RBP9.36□□□□□ -0.91
PPME1-205ENST00000539021 PFASO15067 1338 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 CYP3A7-CYP3A51PA0A087WV96 503 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 HLA-DOAP06340 250 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 CYP3A7P24462 503 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 SNAP25P60880 206 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 ADCY1Q08828 1119 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 SPIRE1Q08AE8 756 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 ZFYVE27Q5T4F4 411 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 C11orf63Q6NUN7 778 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 FAXDC2Q96IV6 333 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 EIF2AK1Q9BQI3 630 aaKnown RBP9.36□□□□□ -0.91
PPME1-205ENST00000539021 CDC42EP4Q9H3Q1 356 aaKnown RBP9.36□□□□□ -0.91
PPME1-205ENST00000539021 OLFML3Q9NRN5 406 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 COL14A1Q05707 1796 aaKnown RBP9.36□□□□□ -0.91
PPME1-205ENST00000539021 ANKRD63C9JTQ0 380 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 C6orf229H3BNL8 230 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 TBX3O15119 743 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 CALRP27797 417 aaKnown RBP9.36□□□□□ -0.91
PPME1-205ENST00000539021 RINT1Q6NUQ1 792 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 MOXD1Q6UVY6 613 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 TRMT10CQ7L0Y3 403 aaKnown RBP9.36□□□□□ -0.91
PPME1-205ENST00000539021 RPUSD2Q8IZ73 545 aaKnown RBP9.36□□□□□ -0.91
PPME1-205ENST00000539021 TGS1Q96RS0 853 aaKnown RBP9.36□□□□□ -0.91
PPME1-205ENST00000539021 MKNK1Q9BUB5 465 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 NKIRAS1Q9NYS0 192 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 SPATA31A1Q5TZJ5 1347 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 ARFGEF1Q9Y6D6 1849 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 A8MUI8 341 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 EIF3DO15371 548 aaKnown RBP eCLIP9.36□□□□□ -0.91
PPME1-205ENST00000539021 ATMINO43313 823 aaPredicted RBP9.36□□□□□ -0.91
PPME1-205ENST00000539021 KRT16P08779 473 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 CTNNA2P26232 953 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 CDC25CP30307 473 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 MFSD5Q6N075 450 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 RNF207Q6ZRF8 634 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 CYFIP1Q7L576 1253 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 SLC13A5Q86YT5 568 aaPredicted RBP9.36□□□□□ -0.91
PPME1-205ENST00000539021 MAB21L3Q8N8X9 362 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 CNBD1Q8NA66 436 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 FAM20AQ96MK3 541 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 PAIP2Q9BPZ3 127 aaKnown RBP9.36□□□□□ -0.91
PPME1-205ENST00000539021 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.36□□□□□ -0.916e-6■■■■■ 48.1
PPME1-205ENST00000539021 PNMA3Q9UL41 463 aa9.36□□□□□ -0.91
PPME1-205ENST00000539021 IGKV6D-41A0A0C4DH26 115 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms