RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 AUHQ13825 339 aaKnown RBP9.7□□□□□ -0.86
SNHG1-209ENST00000538654 PLS1Q14651 629 aa9.7□□□□□ -0.86
SNHG1-209ENST00000538654 ZRSR2Q15696 482 aaKnown RBP9.7□□□□□ -0.86
SNHG1-209ENST00000538654 SLC5A9Q2M3M2 681 aa9.7□□□□□ -0.86
SNHG1-209ENST00000538654 TMEM119Q4V9L6 283 aa9.7□□□□□ -0.86
SNHG1-209ENST00000538654 NUGGCQ68CJ6 796 aa9.7□□□□□ -0.86
SNHG1-209ENST00000538654 FRMD5Q7Z6J6 570 aa9.7□□□□□ -0.86
SNHG1-209ENST00000538654 C14orf80Q86SX3 495 aa9.7□□□□□ -0.86
SNHG1-209ENST00000538654 GALNT15Q8N3T1 639 aa9.7□□□□□ -0.86
SNHG1-209ENST00000538654 KIF2BQ8N4N8 673 aa9.7□□□□□ -0.86
SNHG1-209ENST00000538654 ITFG2Q969R8 447 aa9.7□□□□□ -0.86
SNHG1-209ENST00000538654 MTMR9Q96QG7 549 aa9.7□□□□□ -0.86
SNHG1-209ENST00000538654 PRKAG3Q9UGI9 489 aa9.7□□□□□ -0.86
SNHG1-209ENST00000538654 NCANO14594 1321 aa9.7□□□□□ -0.86
SNHG1-209ENST00000538654 RPTORQ8N122 1335 aa9.7□□□□□ -0.86
SNHG1-209ENST00000538654 POTEFA5A3E0 1075 aa9.7□□□□□ -0.86
SNHG1-209ENST00000538654 SMCO2A6NFE2 343 aa9.7□□□□□ -0.86
SNHG1-209ENST00000538654 SNAP23O00161 211 aa9.7□□□□□ -0.86
SNHG1-209ENST00000538654 RIPK2O43353 540 aa9.7□□□□□ -0.86
SNHG1-209ENST00000538654 SLC26A4O43511 780 aa9.7□□□□□ -0.86
SNHG1-209ENST00000538654 TIMM44O43615 452 aa9.7□□□□□ -0.86
SNHG1-209ENST00000538654 BPNT1O95861 308 aa9.7□□□□□ -0.86
SNHG1-209ENST00000538654 POTEIP0CG38 1075 aa9.7□□□□□ -0.86
SNHG1-209ENST00000538654 POTEJP0CG39 1038 aa9.7□□□□□ -0.86
SNHG1-209ENST00000538654 CHRNA2Q15822 529 aa9.7□□□□□ -0.86
SNHG1-209ENST00000538654 POTEEQ6S8J3 1075 aa9.7□□□□□ -0.86
SNHG1-209ENST00000538654 ZDHHC24Q6UX98 284 aa9.7□□□□□ -0.86
SNHG1-209ENST00000538654 TRMT10CQ7L0Y3 403 aaKnown RBP9.7□□□□□ -0.86
SNHG1-209ENST00000538654 FBXO25Q8TCJ0 367 aa9.7□□□□□ -0.86
SNHG1-209ENST00000538654 SNX29Q8TEQ0 813 aa9.7□□□□□ -0.86
SNHG1-209ENST00000538654 NELL1Q92832 810 aa9.7□□□□□ -0.86
SNHG1-209ENST00000538654 SERPINB12Q96P63 405 aa9.7□□□□□ -0.86
SNHG1-209ENST00000538654 SPZ1Q9BXG8 430 aa9.7□□□□□ -0.86
SNHG1-209ENST00000538654 MTFR1LQ9H019 292 aa9.7□□□□□ -0.86
SNHG1-209ENST00000538654 DCP1AQ9NPI6 582 aaPredicted RBP9.7□□□□□ -0.86
SNHG1-209ENST00000538654 RPL26L1Q9UNX3 145 aaKnown RBP9.7□□□□□ -0.86
SNHG1-209ENST00000538654 SYNGAP1Q96PV0 1343 aa9.7□□□□□ -0.86
SNHG1-209ENST00000538654 KIAA1551Q9HCM1 1747 aa9.7□□□□□ -0.86
SNHG1-209ENST00000538654 DPPA5A6NC42 116 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 A8MUI8 341 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 PHF2O75151 1096 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 GGPS1O95749 300 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 BAG3O95817 575 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 LMNAP02545 664 aaKnown RBP9.69□□□□□ -0.86
SNHG1-209ENST00000538654 AFPP02771 609 aaKnown RBP9.69□□□□□ -0.86
SNHG1-209ENST00000538654 GNAT1P11488 350 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 ACADSP16219 412 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 ALDH3A1P30838 453 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 KLC1Q07866 573 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 SF3A3Q12874 501 aaKnown RBP eCLIP9.69□□□□□ -0.866e-19■■■□□ 14.9
SNHG1-209ENST00000538654 ADAM9Q13443 819 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 PRPF4BQ13523 1007 aaKnown RBP9.69□□□□□ -0.86
SNHG1-209ENST00000538654 SETDB1Q15047 1291 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 EXOC3L4Q17RC7 722 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 TRIM68Q6AZZ1 485 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 FITM2Q8N6M3 262 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 EPS8L3Q8TE67 593 aaKnown RBP9.69□□□□□ -0.86
SNHG1-209ENST00000538654 TBCKQ8TEA7 893 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 CKAP2Q8WWK9 683 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 RFFLQ8WZ73 363 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 EPAS1Q99814 870 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 ETNK1Q9HBU6 452 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 SNX24Q9Y343 169 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 DDX3YO15523 660 aaKnown RBP9.69□□□□□ -0.86
SNHG1-209ENST00000538654 GPR37L1O60883 481 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 RNASEH2AO75792 299 aaKnown RBP9.69□□□□□ -0.86
SNHG1-209ENST00000538654 TMEM253P0C7T8 217 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 RASSF2P50749 326 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 TFAP4Q01664 338 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 ZNF394Q53GI3 561 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 CAVIN4Q5BKX8 364 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 ANO7Q6IWH7 933 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 ZCCHC8Q6NZY4 707 aaKnown RBP9.69□□□□□ -0.86
SNHG1-209ENST00000538654 MTHFD1LQ6UB35 978 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 INTS8Q75QN2 995 aaKnown RBP9.69□□□□□ -0.86
SNHG1-209ENST00000538654 EXOC3L1Q86VI1 746 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 ZNF34Q8IZ26 560 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 REXO1Q8N1G1 1221 aaKnown RBP9.69□□□□□ -0.86
SNHG1-209ENST00000538654 PIGOQ8TEQ8 1089 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 TEKT4Q8WW24 435 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 INPP5DQ92835 1189 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 DNAJC19Q96DA6 116 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 TMEM237Q96Q45 408 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 LRMDAQ9H2I8 198 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 SEMA4AQ9H3S1 761 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 CYP39A1Q9NYL5 469 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 PCYOX1Q9UHG3 505 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 PITPNM2Q9BZ72 1349 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 KDM3AQ9Y4C1 1321 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 GPR75-ASB3A0A0A6YYF3 556 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 ESYT2A0FGR8 921 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 TMEM120BA0PK00 339 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 BCL9O00512 1426 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 DNAJC6O75061 913 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 ADAMTS2O95450 1211 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 KRT13P13646 458 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 CHRNDQ07001 517 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 GNPTABQ3T906 1256 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 CYFIP1Q7L576 1253 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.69□□□□□ -0.863e-7■■■■■ 27.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms