RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 SPATA31E1Q6ZUB1 1445 aa17.89■□□□□ 0.45
SCARB1-205ENST00000538291 COPS2P61201 443 aa17.89■□□□□ 0.45
SCARB1-205ENST00000538291 DCAF4L1Q3SXM0 396 aa17.89■□□□□ 0.45
SCARB1-205ENST00000538291 ACAD11Q709F0 780 aa17.89■□□□□ 0.45
SCARB1-205ENST00000538291 CDKL3Q8IVW4 592 aaPredicted RBP17.89■□□□□ 0.45
SCARB1-205ENST00000538291 MB21D2Q8IYB1 491 aaPredicted RBP17.89■□□□□ 0.45
SCARB1-205ENST00000538291 OR6J1Q8NGC5 347 aa17.89■□□□□ 0.45
SCARB1-205ENST00000538291 DDX50Q9BQ39 737 aaKnown RBP17.89■□□□□ 0.45
SCARB1-205ENST00000538291 EIF2AK1Q9BQI3 630 aaKnown RBP17.89■□□□□ 0.45
SCARB1-205ENST00000538291 TRIM45Q9H8W5 580 aaPredicted RBP17.89■□□□□ 0.45
SCARB1-205ENST00000538291 POLD4Q9HCU8 107 aa17.89■□□□□ 0.45
SCARB1-205ENST00000538291 BFARQ9NZS9 450 aa17.89■□□□□ 0.45
SCARB1-205ENST00000538291 ANGPTL2Q9UKU9 493 aa17.89■□□□□ 0.45
SCARB1-205ENST00000538291 NR1H3Q13133 447 aa17.88■□□□□ 0.45
SCARB1-205ENST00000538291 SLFNL1Q499Z3 407 aa17.88■□□□□ 0.45
SCARB1-205ENST00000538291 LZICQ8WZA0 190 aa17.88■□□□□ 0.45
SCARB1-205ENST00000538291 SH3KBP1Q96B97 665 aa17.88■□□□□ 0.45
SCARB1-205ENST00000538291 GTSE1Q9NYZ3 720 aa17.88■□□□□ 0.45
SCARB1-205ENST00000538291 RFX7Q2KHR2 1363 aa17.88■□□□□ 0.45
SCARB1-205ENST00000538291 PRCPP42785 496 aa17.88■□□□□ 0.45
SCARB1-205ENST00000538291 EN1Q05925 392 aaPredicted RBP17.88■□□□□ 0.45
SCARB1-205ENST00000538291 TRIM55Q9BYV6 548 aa17.88■□□□□ 0.45
SCARB1-205ENST00000538291 MAP3K4Q9Y6R4 1608 aa17.88■□□□□ 0.45
SCARB1-205ENST00000538291 ORC4O43929 436 aa17.88■□□□□ 0.45
SCARB1-205ENST00000538291 HADHAP40939 763 aa17.88■□□□□ 0.45
SCARB1-205ENST00000538291 STAT5BP51692 787 aa17.88■□□□□ 0.45
SCARB1-205ENST00000538291 PRAMEP78395 509 aa17.88■□□□□ 0.45
SCARB1-205ENST00000538291 CDC42EP1Q00587 391 aa17.88■□□□□ 0.45
SCARB1-205ENST00000538291 FSCBQ5H9T9 825 aa17.88■□□□□ 0.45
SCARB1-205ENST00000538291 SPATA17Q96L03 361 aa17.88■□□□□ 0.45
SCARB1-205ENST00000538291 TRIM54Q9BYV2 358 aa17.88■□□□□ 0.45
SCARB1-205ENST00000538291 ELP3Q9H9T3 547 aa17.88■□□□□ 0.45
SCARB1-205ENST00000538291 DDX56Q9NY93 547 aaKnown RBP17.88■□□□□ 0.45
SCARB1-205ENST00000538291 FOXD4Q12950 439 aaPredicted RBP17.88■□□□□ 0.45
SCARB1-205ENST00000538291 TAF1CQ15572 869 aaPredicted RBP17.88■□□□□ 0.45
SCARB1-205ENST00000538291 FAM102AQ5T9C2 384 aaPredicted RBP17.88■□□□□ 0.45
SCARB1-205ENST00000538291 NUGGCQ68CJ6 796 aa17.88■□□□□ 0.45
SCARB1-205ENST00000538291 RBM46Q8TBY0 533 aaKnown RBP17.88■□□□□ 0.45
SCARB1-205ENST00000538291 FAM84BQ96KN1 310 aaPredicted RBP17.88■□□□□ 0.45
SCARB1-205ENST00000538291 JPH1Q9HDC5 661 aaPredicted RBP17.88■□□□□ 0.45
SCARB1-205ENST00000538291 AKR1B1P15121 316 aa17.88■□□□□ 0.45
SCARB1-205ENST00000538291 COG2Q14746 738 aa17.88■□□□□ 0.45
SCARB1-205ENST00000538291 DRAP1Q14919 205 aaPredicted RBP17.88■□□□□ 0.45
SCARB1-205ENST00000538291 CYFIP1Q7L576 1253 aa17.88■□□□□ 0.45
SCARB1-205ENST00000538291 EGFL8Q99944 293 aa17.88■□□□□ 0.45
SCARB1-205ENST00000538291 SIK2Q9H0K1 926 aa17.88■□□□□ 0.45
SCARB1-205ENST00000538291 APOBEC2Q9Y235 224 aaKnown RBP17.88■□□□□ 0.45
SCARB1-205ENST00000538291 L3MBTL1Q9Y468 752 aa17.88■□□□□ 0.45
SCARB1-205ENST00000538291 KCNJ6P48051 423 aa17.87■□□□□ 0.45
SCARB1-205ENST00000538291 FBXW4P57775 412 aa17.87■□□□□ 0.45
SCARB1-205ENST00000538291 CAPRIN1Q14444 709 aaKnown RBP17.87■□□□□ 0.45
SCARB1-205ENST00000538291 TAF11Q15544 211 aa17.87■□□□□ 0.45
SCARB1-205ENST00000538291 SYT2Q8N9I0 419 aaPredicted RBP17.87■□□□□ 0.45
SCARB1-205ENST00000538291 NRBF2Q96F24 287 aa17.87■□□□□ 0.45
SCARB1-205ENST00000538291 TRPV6Q9H1D0 765 aa17.87■□□□□ 0.45
SCARB1-205ENST00000538291 DHX35Q9H5Z1 703 aaKnown RBP17.87■□□□□ 0.45
SCARB1-205ENST00000538291 PYGBP11216 843 aa17.87■□□□□ 0.45
SCARB1-205ENST00000538291 CDK17Q00537 523 aa17.87■□□□□ 0.45
SCARB1-205ENST00000538291 AP1B1Q10567 949 aa17.87■□□□□ 0.45
SCARB1-205ENST00000538291 ZNF235Q14590 738 aa17.87■□□□□ 0.45
SCARB1-205ENST00000538291 SH3TC2Q8TF17 1288 aa17.87■□□□□ 0.45
SCARB1-205ENST00000538291 PITPNM3Q9BZ71 974 aa17.87■□□□□ 0.45
SCARB1-205ENST00000538291 ABHD10Q9NUJ1 306 aa17.87■□□□□ 0.45
SCARB1-205ENST00000538291 TPX2Q9ULW0 747 aaKnown RBP17.87■□□□□ 0.45
SCARB1-205ENST00000538291 AXIN2Q9Y2T1 843 aa17.87■□□□□ 0.45
SCARB1-205ENST00000538291 ZNF189O75820 626 aaPredicted RBP17.87■□□□□ 0.45
SCARB1-205ENST00000538291 ZFXP17010 805 aaPredicted RBP17.87■□□□□ 0.45
SCARB1-205ENST00000538291 HAUS6Q7Z4H7 955 aa17.87■□□□□ 0.45
SCARB1-205ENST00000538291 RNF149Q8NC42 400 aa17.87■□□□□ 0.45
SCARB1-205ENST00000538291 LBRQ14739 615 aaKnown RBP17.86■□□□□ 0.45
SCARB1-205ENST00000538291 TADA2BQ86TJ2 420 aa17.86■□□□□ 0.45
SCARB1-205ENST00000538291 MICALL2Q8IY33 904 aa17.86■□□□□ 0.45
SCARB1-205ENST00000538291 TEX12Q9BXU0 123 aa17.86■□□□□ 0.45
SCARB1-205ENST00000538291 PPARGC1AQ9UBK2 798 aaKnown RBP17.86■□□□□ 0.45
SCARB1-205ENST00000538291 TJP2Q9UDY2 1190 aa17.86■□□□□ 0.45
SCARB1-205ENST00000538291 PIN4Q9Y237 131 aaKnown RBP17.86■□□□□ 0.45
SCARB1-205ENST00000538291 GSG1L2A8MUP6 293 aa17.86■□□□□ 0.45
SCARB1-205ENST00000538291 RASA4BC9J798 803 aa17.86■□□□□ 0.45
SCARB1-205ENST00000538291 RASA4O43374 803 aa17.86■□□□□ 0.45
SCARB1-205ENST00000538291 TDP2O95551 362 aa17.86■□□□□ 0.45
SCARB1-205ENST00000538291 CYBBP04839 570 aa17.86■□□□□ 0.45
SCARB1-205ENST00000538291 CASP1P29466 404 aa17.86■□□□□ 0.45
SCARB1-205ENST00000538291 ATP6V1E1P36543 226 aa17.86■□□□□ 0.45
SCARB1-205ENST00000538291 CEP55Q53EZ4 464 aa17.86■□□□□ 0.45
SCARB1-205ENST00000538291 GUF1Q8N442 669 aaKnown RBP17.86■□□□□ 0.45
SCARB1-205ENST00000538291 UBE2Q2Q8WVN8 375 aa17.86■□□□□ 0.45
SCARB1-205ENST00000538291 CTIFO43310 598 aaKnown RBP17.86■□□□□ 0.45
SCARB1-205ENST00000538291 DCTN3O75935 186 aa17.86■□□□□ 0.45
SCARB1-205ENST00000538291 MDM2Q00987 491 aaPredicted RBP17.86■□□□□ 0.45
SCARB1-205ENST00000538291 POU5F1BQ06416 359 aa17.86■□□□□ 0.45
SCARB1-205ENST00000538291 MTMR2Q13614 643 aa17.86■□□□□ 0.45
SCARB1-205ENST00000538291 MORC4Q8TE76 937 aa17.86■□□□□ 0.45
SCARB1-205ENST00000538291 TNS3Q68CZ2 1445 aa17.86■□□□□ 0.45
SCARB1-205ENST00000538291 ZNF521Q96K83 1311 aa17.86■□□□□ 0.45
SCARB1-205ENST00000538291 ROR1Q01973 937 aa17.86■□□□□ 0.45
SCARB1-205ENST00000538291 CASP8Q14790 479 aa17.86■□□□□ 0.45
SCARB1-205ENST00000538291 A0A0G2JND7 137 aa17.85■□□□□ 0.45
SCARB1-205ENST00000538291 GOLGA8MH3BSY2 632 aa17.85■□□□□ 0.45
SCARB1-205ENST00000538291 KIAA0391O15091 583 aaKnown RBP17.85■□□□□ 0.45
SCARB1-205ENST00000538291 SETSIPP0DME0 302 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms