RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 EHD2Q9NZN4 543 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 RSPH14Q9UHP6 348 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 ZMYM5Q9UJ78 669 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 KCNH3Q9ULD8 1083 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 DERAQ9Y315 318 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 INSL6Q9Y581 213 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 UQCRHLA0A096LP55 91 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 LRRIQ4A6NIV6 560 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 DHX15O43143 795 aaKnown RBP3.91□□□□□ -1.78
PTPN22-211ENST00000538253 ECM2O94769 699 aaPredicted RBP3.91□□□□□ -1.78
PTPN22-211ENST00000538253 UQCRHP07919 91 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 TAL1P17542 331 aaPredicted RBP3.91□□□□□ -1.78
PTPN22-211ENST00000538253 PNPLA4P41247 253 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 SARSP49591 514 aaKnown RBP3.91□□□□□ -1.78
PTPN22-211ENST00000538253 LIG4P49917 911 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 ATN1P54259 1190 aaPredicted RBP3.91□□□□□ -1.78
PTPN22-211ENST00000538253 IGBP1P78318 339 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 ITGB3BPQ13352 177 aaPredicted RBP3.91□□□□□ -1.78
PTPN22-211ENST00000538253 KCNB1Q14721 858 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.91□□□□□ -1.78
PTPN22-211ENST00000538253 UNC13DQ70J99 1090 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 PPFIBP1Q86W92 1011 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 SKAP1Q86WV1 359 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 FSIP1Q8NA03 581 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 FAXDC2Q96IV6 333 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 GAS2L1Q99501 681 aaPredicted RBP3.91□□□□□ -1.78
PTPN22-211ENST00000538253 CDCA3Q99618 268 aaPredicted RBP3.91□□□□□ -1.78
PTPN22-211ENST00000538253 TCHPQ9BT92 498 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 POLR3FQ9H1D9 316 aaPredicted RBP3.91□□□□□ -1.78
PTPN22-211ENST00000538253 RMI1Q9H9A7 625 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 OLFML3Q9NRN5 406 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.91□□□□□ -1.78
PTPN22-211ENST00000538253 TMEM161AQ9NX61 479 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 MAGEC2Q9UBF1 373 aaPredicted RBP3.91□□□□□ -1.78
PTPN22-211ENST00000538253 DDX49Q9Y6V7 483 aaKnown RBP3.91□□□□□ -1.78
PTPN22-211ENST00000538253 ATP8B3O60423 1300 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 IGKV6-21A0A0C4DH24 114 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 CCDC169A6NNP5 214 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 H7C4K7 107 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 INO80B-WBP1J3KQ70 363 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 ACKR2O00590 384 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 USO1O60763 962 aaKnown RBP3.91□□□□□ -1.78
PTPN22-211ENST00000538253 ZNF623O75123 536 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 C22orf31O95567 290 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 IQCF3P0C7M6 154 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 ITGA4P13612 1032 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 DARSP14868 501 aaKnown RBP3.91□□□□□ -1.78
PTPN22-211ENST00000538253 EN2P19622 333 aaPredicted RBP3.91□□□□□ -1.78
PTPN22-211ENST00000538253 GARTP22102 1010 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 BDNFP23560 247 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 RARRES1P49788 294 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 SNX16P57768 344 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 PTENP60484 403 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 SMARCB1Q12824 385 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 PRPF4BQ13523 1007 aaKnown RBP3.91□□□□□ -1.78
PTPN22-211ENST00000538253 TARBP2Q15633 366 aaKnown RBP3.91□□□□□ -1.78
PTPN22-211ENST00000538253 HSDL1Q3SXM5 330 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 RESP18Q5W5W9 173 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 PPP1R2P3Q6NXS1 205 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 UBE2Q1Q7Z7E8 422 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 FERMT3Q86UX7 667 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 CCDC60Q8IWA6 550 aaPredicted RBP3.91□□□□□ -1.78
PTPN22-211ENST00000538253 LRRC43Q8N309 656 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 FIBCD1Q8N539 461 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 MYCT1Q8N699 235 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 KLHL23Q8NBE8 558 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 OXER1Q8TDS5 423 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 LEO1Q8WVC0 666 aaPredicted RBP3.91□□□□□ -1.78
PTPN22-211ENST00000538253 LMBR1Q8WVP7 490 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 TAF4BQ92750 862 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 EXOC4Q96A65 974 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 LENG9Q96B70 501 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 PGBD1Q96JS3 809 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 ZNF560Q96MR9 790 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 C7orf25Q9BPX7 421 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 C11orf84Q9BUA3 381 aaPredicted RBP3.91□□□□□ -1.78
PTPN22-211ENST00000538253 FAM49AQ9H0Q0 323 aaPredicted RBP3.91□□□□□ -1.78
PTPN22-211ENST00000538253 RNPEPQ9H4A4 650 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 CXorf56Q9H5V9 222 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 SETD4Q9NVD3 440 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 DSEQ9UL01 958 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 CDY2AQ9Y6F7 541 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 FAM237AA0A1B0GTK4 181 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.91□□□□□ -1.78
PTPN22-211ENST00000538253 SMTNL1A8MU46 457 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 MAPK13O15264 365 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 ZRANB2O95218 330 aaKnown RBP eCLIP3.91□□□□□ -1.78
PTPN22-211ENST00000538253 PRKCBP05771 671 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 CLTAP09496 248 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 FAM200BP0CF97 657 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 IDEP14735 1019 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 LIG1P18858 919 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 E2F5Q15329 346 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 NPY5RQ15761 445 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 FAM26FQ5R3K3 315 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 TWF2Q6IBS0 349 aaKnown RBP3.91□□□□□ -1.78
PTPN22-211ENST00000538253 SLC27A1Q6PCB7 646 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 C16orf87Q6PH81 154 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 SASS6Q6UVJ0 657 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 CLEC17AQ6ZS10 378 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms