RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 ENOX2Q16206 610 aaKnown RBP7.18□□□□□ -1.26
USP28-206ENST00000538224 SNRNP35Q16560 246 aaKnown RBP7.18□□□□□ -1.26
USP28-206ENST00000538224 UGCGQ16739 394 aa7.18□□□□□ -1.26
USP28-206ENST00000538224 FAM160B1Q5W0V3 765 aa7.18□□□□□ -1.26
USP28-206ENST00000538224 KRT39Q6A163 491 aa7.18□□□□□ -1.26
USP28-206ENST00000538224 C11orf63Q6NUN7 778 aa7.18□□□□□ -1.26
USP28-206ENST00000538224 KCNV1Q6PIU1 500 aa7.18□□□□□ -1.26
USP28-206ENST00000538224 CCNI2Q6ZMN8 369 aaPredicted RBP7.18□□□□□ -1.26
USP28-206ENST00000538224 HOMEZQ8IX15 550 aa7.18□□□□□ -1.26
USP28-206ENST00000538224 LRRC57Q8N9N7 239 aa7.18□□□□□ -1.26
USP28-206ENST00000538224 USP38Q8NB14 1042 aa7.18□□□□□ -1.26
USP28-206ENST00000538224 PROCA1Q8NCQ7 364 aaPredicted RBP7.18□□□□□ -1.26
USP28-206ENST00000538224 TPCN2Q8NHX9 752 aa7.18□□□□□ -1.26
USP28-206ENST00000538224 SLC30A5Q8TAD4 765 aa7.18□□□□□ -1.26
USP28-206ENST00000538224 ACTRT1Q8TDG2 376 aa7.18□□□□□ -1.26
USP28-206ENST00000538224 AENQ8WTP8 325 aaKnown RBP7.18□□□□□ -1.26
USP28-206ENST00000538224 DHX38Q92620 1227 aaKnown RBP7.18□□□□□ -1.26
USP28-206ENST00000538224 CAVIN3Q969G5 261 aa7.18□□□□□ -1.26
USP28-206ENST00000538224 ZKSCAN4Q969J2 545 aaPredicted RBP7.18□□□□□ -1.26
USP28-206ENST00000538224 CCDC102AQ96A19 550 aa7.18□□□□□ -1.26
USP28-206ENST00000538224 FBXL18Q96ME1 805 aa7.18□□□□□ -1.26
USP28-206ENST00000538224 NT5C1BQ96P26 610 aa7.18□□□□□ -1.26
USP28-206ENST00000538224 RUFY1Q96T51 708 aa7.18□□□□□ -1.26
USP28-206ENST00000538224 AGPAT1Q99943 283 aa7.18□□□□□ -1.26
USP28-206ENST00000538224 SGIP1Q9BQI5 828 aa7.18□□□□□ -1.26
USP28-206ENST00000538224 SYT11Q9BT88 431 aa7.18□□□□□ -1.26
USP28-206ENST00000538224 TMEM8AQ9HCN3 771 aa7.18□□□□□ -1.26
USP28-206ENST00000538224 PDE11AQ9HCR9 933 aa7.18□□□□□ -1.26
USP28-206ENST00000538224 A1CFQ9NQ94 594 aaKnown RBP7.18□□□□□ -1.26
USP28-206ENST00000538224 RNF216Q9NWF9 866 aaPredicted RBP7.18□□□□□ -1.26
USP28-206ENST00000538224 GABBR1Q9UBS5 961 aa7.18□□□□□ -1.26
USP28-206ENST00000538224 SEPT9Q9UHD8 586 aaPredicted RBP7.18□□□□□ -1.26
USP28-206ENST00000538224 COQ4Q9Y3A0 265 aa7.18□□□□□ -1.26
USP28-206ENST00000538224 AFG3L2Q9Y4W6 797 aa7.18□□□□□ -1.26
USP28-206ENST00000538224 CSADQ9Y600 493 aa7.18□□□□□ -1.26
USP28-206ENST00000538224 LOC102724159A0A0B4J2E5 919 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 GOLGA6L10A0A0M3HER8 536 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 TMCO5BA8MYB1 307 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 GOLGA8KD6RF30 607 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 HNRNPDLO14979 420 aaKnown RBP7.17□□□□□ -1.26
USP28-206ENST00000538224 NCK2O43639 380 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 GAS2O43903 313 aaKnown RBP7.17□□□□□ -1.26
USP28-206ENST00000538224 OPA1O60313 960 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 LDHAP00338 332 aaKnown RBP7.17□□□□□ -1.26
USP28-206ENST00000538224 OATP04181 439 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 GZMAP12544 262 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 CNGA1P29973 690 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 NF2P35240 595 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 NAMPTP43490 491 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 IREB2P48200 963 aaKnown RBP7.17□□□□□ -1.26
USP28-206ENST00000538224 PDE6CP51160 858 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 GPC3P51654 580 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 POLGP54098 1239 aaPredicted RBP7.17□□□□□ -1.26
USP28-206ENST00000538224 GALCP54803 685 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 ACTR2P61160 394 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 STRN3Q13033 797 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 CUL1Q13616 776 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 PLS1Q14651 629 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 PWP2Q15269 919 aaKnown RBP7.17□□□□□ -1.26
USP28-206ENST00000538224 ARHGAP44Q17R89 818 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 TAF3Q5VWG9 929 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 ALS2CLQ60I27 953 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 PLA2G4FQ68DD2 849 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 SLFN12LQ6IEE8 588 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 ABHD15Q6UXT9 468 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 ANO5Q75V66 913 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.17□□□□□ -1.26
USP28-206ENST00000538224 MAEAQ7L5Y9 396 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 MAATS1Q7Z4T9 603 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 DAAM2Q86T65 1068 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 RIOX2Q8IUF8 465 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 GLYCTKQ8IVS8 523 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 KSR1Q8IVT5 923 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 ANKRD35Q8N283 1001 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 GPD1LQ8N335 351 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 FBXL13Q8NEE6 735 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 LMO3Q8TAP4 145 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 LNX1Q8TBB1 728 aaPredicted RBP7.17□□□□□ -1.26
USP28-206ENST00000538224 TRPM4Q8TD43 1214 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 WHAMMQ8TF30 809 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 POMGNT1Q8WZA1 660 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 TRIM11Q96F44 468 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 BICD1Q96G01 975 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 ZFP91Q96JP5 570 aaPredicted RBP7.17□□□□□ -1.26
USP28-206ENST00000538224 FAM167AQ96KS9 214 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 MFSD14AQ96MC6 490 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.17□□□□□ -1.26
USP28-206ENST00000538224 CBWD1Q9BRT8 395 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 PACSIN1Q9BY11 444 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 CARD9Q9H257 536 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 PCIF1Q9H4Z3 704 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 SLITRK6Q9H5Y7 841 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 BCAS3Q9H6U6 928 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 UBE2TQ9NPD8 197 aaPredicted RBP7.17□□□□□ -1.26
USP28-206ENST00000538224 PRDM10Q9NQV6 1147 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 CYP26B1Q9NR63 512 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 ADARB2Q9NS39 739 aaKnown RBP7.17□□□□□ -1.26
USP28-206ENST00000538224 RBM12Q9NTZ6 932 aaKnown RBP7.17□□□□□ -1.26
USP28-206ENST00000538224 ARHGAP28Q9P2N2 729 aa7.17□□□□□ -1.26
USP28-206ENST00000538224 AJAP1Q9UKB5 411 aaPredicted RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms