RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 COL6A2P12110 1019 aa11.46□□□□□ -0.58
RTN3-208ENST00000537981 CA8P35219 290 aa11.46□□□□□ -0.58
RTN3-208ENST00000537981 DNAJC3Q13217 504 aa11.46□□□□□ -0.58
RTN3-208ENST00000537981 PRPF4BQ13523 1007 aaKnown RBP11.46□□□□□ -0.58
RTN3-208ENST00000537981 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.46□□□□□ -0.58
RTN3-208ENST00000537981 DUPD1Q68J44 220 aa11.46□□□□□ -0.58
RTN3-208ENST00000537981 COL23A1Q86Y22 540 aaPredicted RBP11.46□□□□□ -0.58
RTN3-208ENST00000537981 AGGF1Q8N302 714 aaeCLIP11.46□□□□□ -0.58
RTN3-208ENST00000537981 RIN3Q8TB24 985 aa11.46□□□□□ -0.58
RTN3-208ENST00000537981 C17orf50Q8WW18 174 aa11.46□□□□□ -0.58
RTN3-208ENST00000537981 NT5C3AQ9H0P0 336 aa11.46□□□□□ -0.58
RTN3-208ENST00000537981 PFDN4Q9NQP4 134 aa11.46□□□□□ -0.58
RTN3-208ENST00000537981 GRHL1Q9NZI5 618 aa11.46□□□□□ -0.58
RTN3-208ENST00000537981 CFAP69A5D8W1 941 aa11.45□□□□□ -0.58
RTN3-208ENST00000537981 NBPF26B4DH59 902 aa11.45□□□□□ -0.58
RTN3-208ENST00000537981 NDUFB5O43674 189 aa11.45□□□□□ -0.58
RTN3-208ENST00000537981 ACSL3O95573 720 aa11.45□□□□□ -0.58
RTN3-208ENST00000537981 CETPP11597 493 aa11.45□□□□□ -0.58
RTN3-208ENST00000537981 GNAT2P19087 354 aa11.45□□□□□ -0.58
RTN3-208ENST00000537981 TAC1P20366 129 aa11.45□□□□□ -0.58
RTN3-208ENST00000537981 AMPD1P23109 780 aa11.45□□□□□ -0.58
RTN3-208ENST00000537981 HOXD12P35452 270 aa11.45□□□□□ -0.58
RTN3-208ENST00000537981 RPL21P46778 160 aaKnown RBP11.45□□□□□ -0.58
RTN3-208ENST00000537981 EMP3P54852 163 aa11.45□□□□□ -0.58
RTN3-208ENST00000537981 NLRP6P59044 892 aa11.45□□□□□ -0.58
RTN3-208ENST00000537981 GSTM4Q03013 218 aa11.45□□□□□ -0.58
RTN3-208ENST00000537981 RAPGEF1Q13905 1077 aa11.45□□□□□ -0.58
RTN3-208ENST00000537981 PLEKHG6Q3KR16 790 aa11.45□□□□□ -0.58
RTN3-208ENST00000537981 PHLDB3Q6NSJ2 640 aa11.45□□□□□ -0.58
RTN3-208ENST00000537981 HS2ST1Q7LGA3 356 aa11.45□□□□□ -0.58
RTN3-208ENST00000537981 TRIM50Q86XT4 487 aa11.45□□□□□ -0.58
RTN3-208ENST00000537981 RNF168Q8IYW5 571 aaPredicted RBP11.45□□□□□ -0.58
RTN3-208ENST00000537981 FANCBQ8NB91 859 aa11.45□□□□□ -0.58
RTN3-208ENST00000537981 C18orf8Q96DM3 657 aa11.45□□□□□ -0.58
RTN3-208ENST00000537981 IRF2BPLQ9H1B7 796 aa11.45□□□□□ -0.58
RTN3-208ENST00000537981 SLC4A7Q9Y6M7 1214 aa11.45□□□□□ -0.58
RTN3-208ENST00000537981 COMMD3-BMI1R4GMX3 469 aa11.45□□□□□ -0.58
RTN3-208ENST00000537981 PHLPP1O60346 1717 aa11.45□□□□□ -0.58
RTN3-208ENST00000537981 RIPK2O43353 540 aa11.45□□□□□ -0.58
RTN3-208ENST00000537981 PRKAB2O43741 272 aa11.45□□□□□ -0.58
RTN3-208ENST00000537981 ECE2O60344 883 aa11.45□□□□□ -0.58
RTN3-208ENST00000537981 LIFRP42702 1097 aa11.45□□□□□ -0.58
RTN3-208ENST00000537981 CDK7P50613 346 aa11.45□□□□□ -0.58
RTN3-208ENST00000537981 POLGP54098 1239 aaPredicted RBP11.45□□□□□ -0.58
RTN3-208ENST00000537981 MTFR1Q15390 333 aa11.45□□□□□ -0.58
RTN3-208ENST00000537981 SLC18A3Q16572 532 aa11.45□□□□□ -0.58
RTN3-208ENST00000537981 TAF1BQ53T94 588 aaPredicted RBP11.45□□□□□ -0.58
RTN3-208ENST00000537981 WASHC2DQ5SRD0 308 aa11.45□□□□□ -0.58
RTN3-208ENST00000537981 FAM83BQ5T0W9 1011 aa11.45□□□□□ -0.58
RTN3-208ENST00000537981 SHKBP1Q8TBC3 707 aa11.45□□□□□ -0.58
RTN3-208ENST00000537981 SH3TC2Q8TF17 1288 aa11.45□□□□□ -0.58
RTN3-208ENST00000537981 ZNF184Q99676 751 aaPredicted RBP11.45□□□□□ -0.58
RTN3-208ENST00000537981 ASCC2Q9H1I8 757 aaPredicted RBP11.45□□□□□ -0.58
RTN3-208ENST00000537981 TMEM60Q9H2L4 133 aa11.45□□□□□ -0.58
RTN3-208ENST00000537981 PCDH18Q9HCL0 1135 aa11.45□□□□□ -0.58
RTN3-208ENST00000537981 TBC1D30Q9Y2I9 924 aa11.45□□□□□ -0.58
RTN3-208ENST00000537981 PIK3C2AO00443 1686 aa11.45□□□□□ -0.58
RTN3-208ENST00000537981 LRP6O75581 1613 aa11.45□□□□□ -0.58
RTN3-208ENST00000537981 HEG1Q9ULI3 1381 aa11.44□□□□□ -0.58
RTN3-208ENST00000537981 SSU72P8A0A1W2PR75 194 aa11.44□□□□□ -0.58
RTN3-208ENST00000537981 PGM3O95394 542 aa11.44□□□□□ -0.58
RTN3-208ENST00000537981 YY1P25490 414 aa11.44□□□□□ -0.58
RTN3-208ENST00000537981 MLH1P40692 756 aa11.44□□□□□ -0.58
RTN3-208ENST00000537981 MCAMP43121 646 aa11.44□□□□□ -0.58
RTN3-208ENST00000537981 DR1Q01658 176 aa11.44□□□□□ -0.58
RTN3-208ENST00000537981 SLC9C1Q4G0N8 1177 aa11.44□□□□□ -0.58
RTN3-208ENST00000537981 C6orf118Q5T5N4 469 aa11.44□□□□□ -0.58
RTN3-208ENST00000537981 IZUMO2Q6UXV1 221 aa11.44□□□□□ -0.58
RTN3-208ENST00000537981 MARK2Q7KZI7 788 aaKnown RBP11.44□□□□□ -0.58
RTN3-208ENST00000537981 ZNF554Q86TJ5 538 aa11.44□□□□□ -0.58
RTN3-208ENST00000537981 ZNF654Q8IZM8 581 aa11.44□□□□□ -0.58
RTN3-208ENST00000537981 ERLEC1Q96DZ1 483 aa11.44□□□□□ -0.58
RTN3-208ENST00000537981 FAM81BQ96LP2 452 aa11.44□□□□□ -0.58
RTN3-208ENST00000537981 SIKE1Q9BRV8 207 aa11.44□□□□□ -0.58
RTN3-208ENST00000537981 TMOD4Q9NZQ9 345 aa11.44□□□□□ -0.58
RTN3-208ENST00000537981 CEP72Q9P209 647 aa11.44□□□□□ -0.58
RTN3-208ENST00000537981 SH3GLB1Q9Y371 365 aa11.44□□□□□ -0.58
RTN3-208ENST00000537981 AKAP11Q9UKA4 1901 aa11.44□□□□□ -0.58
RTN3-208ENST00000537981 KIAA0391O15091 583 aaKnown RBP11.44□□□□□ -0.58
RTN3-208ENST00000537981 LSM1O15116 133 aaKnown RBP11.44□□□□□ -0.58
RTN3-208ENST00000537981 RNMTO43148 476 aaKnown RBP11.44□□□□□ -0.58
RTN3-208ENST00000537981 ZNF862O60290 1169 aa11.44□□□□□ -0.58
RTN3-208ENST00000537981 IDH1O75874 414 aaKnown RBP11.44□□□□□ -0.58
RTN3-208ENST00000537981 PSMG1O95456 288 aa11.44□□□□□ -0.58
RTN3-208ENST00000537981 CDK4P11802 303 aa11.44□□□□□ -0.58
RTN3-208ENST00000537981 HARSP12081 509 aaKnown RBP11.44□□□□□ -0.58
RTN3-208ENST00000537981 TATP17735 454 aaPredicted RBP11.44□□□□□ -0.58
RTN3-208ENST00000537981 TXKP42681 527 aa11.44□□□□□ -0.58
RTN3-208ENST00000537981 CCR3P51677 355 aa11.44□□□□□ -0.58
RTN3-208ENST00000537981 ADARP55265 1226 aaKnown RBP11.44□□□□□ -0.58
RTN3-208ENST00000537981 PHEXP78562 749 aa11.44□□□□□ -0.58
RTN3-208ENST00000537981 CFAP157Q5JU67 520 aa11.44□□□□□ -0.58
RTN3-208ENST00000537981 SYDE2Q5VT97 1194 aa11.44□□□□□ -0.58
RTN3-208ENST00000537981 DAB2IPQ5VWQ8 1189 aa11.44□□□□□ -0.58
RTN3-208ENST00000537981 TBC1D9BQ66K14 1250 aa11.44□□□□□ -0.58
RTN3-208ENST00000537981 ANKRD13DQ6ZTN6 518 aa11.44□□□□□ -0.58
RTN3-208ENST00000537981 TREML1Q86YW5 311 aa11.44□□□□□ -0.58
RTN3-208ENST00000537981 ZCRB1Q8TBF4 217 aaKnown RBP11.44□□□□□ -0.58
RTN3-208ENST00000537981 LRRC37BQ96QE4 947 aa11.44□□□□□ -0.58
RTN3-208ENST00000537981 POP1Q99575 1024 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms