RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 PSPC1Q8WXF1 523 aaKnown RBP9.45□□□□□ -0.9
USP28-203ENST00000537490 RSPH1Q8WYR4 309 aa9.45□□□□□ -0.9
USP28-203ENST00000537490 TNFRSF25Q93038 417 aa9.45□□□□□ -0.9
USP28-203ENST00000537490 PGBD4Q96DM1 585 aa9.45□□□□□ -0.9
USP28-203ENST00000537490 NAP1L4Q99733 375 aaKnown RBP9.45□□□□□ -0.9
USP28-203ENST00000537490 VN1R3Q9BXE9 311 aa9.45□□□□□ -0.9
USP28-203ENST00000537490 ADAM7Q9H2U9 754 aa9.45□□□□□ -0.9
USP28-203ENST00000537490 POMKQ9H5K3 350 aa9.45□□□□□ -0.9
USP28-203ENST00000537490 ZSWIM4Q9H7M6 989 aa9.45□□□□□ -0.9
USP28-203ENST00000537490 XPNPEP1Q9NQW7 623 aa9.45□□□□□ -0.9
USP28-203ENST00000537490 PPME1Q9Y570 386 aa9.45□□□□□ -0.9
USP28-203ENST00000537490 IRAK3Q9Y616 596 aa9.45□□□□□ -0.9
USP28-203ENST00000537490 A0A087WWV3 80 aa9.44□□□□□ -0.9
USP28-203ENST00000537490 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.44□□□□□ -0.9
USP28-203ENST00000537490 C2CD4DB7Z1M9 353 aa9.44□□□□□ -0.9
USP28-203ENST00000537490 WNT7AO00755 349 aa9.44□□□□□ -0.9
USP28-203ENST00000537490 ASAP2O43150 1006 aa9.44□□□□□ -0.9
USP28-203ENST00000537490 BAG4O95429 457 aaKnown RBP9.44□□□□□ -0.9
USP28-203ENST00000537490 POMCP01189 267 aa9.44□□□□□ -0.9
USP28-203ENST00000537490 KRT2P35908 639 aa9.44□□□□□ -0.9
USP28-203ENST00000537490 MRE11P49959 708 aa9.44□□□□□ -0.9
USP28-203ENST00000537490 ANAPC15P60006 121 aa9.44□□□□□ -0.9
USP28-203ENST00000537490 ITIH3Q06033 890 aa9.44□□□□□ -0.9
USP28-203ENST00000537490 BMS1Q14692 1282 aaKnown RBP9.44□□□□□ -0.9
USP28-203ENST00000537490 EMC2Q15006 297 aa9.44□□□□□ -0.9
USP28-203ENST00000537490 PTPN21Q16825 1174 aa9.44□□□□□ -0.9
USP28-203ENST00000537490 RARS2Q5T160 578 aaKnown RBP9.44□□□□□ -0.9
USP28-203ENST00000537490 CES5AQ6NT32 575 aa9.44□□□□□ -0.9
USP28-203ENST00000537490 EXOC8Q8IYI6 725 aa9.44□□□□□ -0.9
USP28-203ENST00000537490 SLFN12Q8IYM2 578 aa9.44□□□□□ -0.9
USP28-203ENST00000537490 RNF149Q8NC42 400 aa9.44□□□□□ -0.9
USP28-203ENST00000537490 NSUN7Q8NE18 718 aaKnown RBP9.44□□□□□ -0.9
USP28-203ENST00000537490 PRSS33Q8NF86 280 aa9.44□□□□□ -0.9
USP28-203ENST00000537490 TCP11Q8WWU5 503 aa9.44□□□□□ -0.9
USP28-203ENST00000537490 WASF1Q92558 559 aa9.44□□□□□ -0.9
USP28-203ENST00000537490 ASIC4Q96FT7 647 aa9.44□□□□□ -0.9
USP28-203ENST00000537490 MTRQ99707 1265 aa9.44□□□□□ -0.9
USP28-203ENST00000537490 HSD17B14Q9BPX1 270 aa9.44□□□□□ -0.9
USP28-203ENST00000537490 EIF2AK1Q9BQI3 630 aaKnown RBP9.44□□□□□ -0.9
USP28-203ENST00000537490 RSAD1Q9HA92 442 aa9.44□□□□□ -0.9
USP28-203ENST00000537490 TSHZ2Q9NRE2 1034 aa9.44□□□□□ -0.9
USP28-203ENST00000537490 ZNF318Q5VUA4 2279 aa9.43□□□□□ -0.9
USP28-203ENST00000537490 BTBD18B2RXH4 712 aa9.43□□□□□ -0.9
USP28-203ENST00000537490 NRP1O14786 923 aa9.43□□□□□ -0.9
USP28-203ENST00000537490 GAS2O43903 313 aaKnown RBP9.43□□□□□ -0.9
USP28-203ENST00000537490 JAK2O60674 1132 aa9.43□□□□□ -0.9
USP28-203ENST00000537490 LILRB3O75022 631 aa9.43□□□□□ -0.9
USP28-203ENST00000537490 ALDH2P05091 517 aa9.43□□□□□ -0.9
USP28-203ENST00000537490 NCLP19338 710 aaKnown RBP9.43□□□□□ -0.9
USP28-203ENST00000537490 FOSBP53539 338 aa9.43□□□□□ -0.9
USP28-203ENST00000537490 PTENP60484 403 aa9.43□□□□□ -0.9
USP28-203ENST00000537490 GIT2Q14161 759 aa9.43□□□□□ -0.9
USP28-203ENST00000537490 ANKRD1Q15327 319 aa9.43□□□□□ -0.9
USP28-203ENST00000537490 PTPN14Q15678 1187 aa9.43□□□□□ -0.9
USP28-203ENST00000537490 FBXL6Q8N531 539 aa9.43□□□□□ -0.9
USP28-203ENST00000537490 TMEM87AQ8NBN3 555 aa9.43□□□□□ -0.9
USP28-203ENST00000537490 KREMEN2Q8NCW0 462 aa9.43□□□□□ -0.9
USP28-203ENST00000537490 SMG8Q8ND04 991 aaKnown RBP9.43□□□□□ -0.9
USP28-203ENST00000537490 URGCPQ8TCY9 931 aa9.43□□□□□ -0.9
USP28-203ENST00000537490 ASAP3Q8TDY4 903 aa9.43□□□□□ -0.9
USP28-203ENST00000537490 CPB2Q96IY4 423 aa9.43□□□□□ -0.9
USP28-203ENST00000537490 NECTIN4Q96NY8 510 aa9.43□□□□□ -0.9
USP28-203ENST00000537490 KLHL5Q96PQ7 755 aa9.43□□□□□ -0.9
USP28-203ENST00000537490 PHOX2BQ99453 314 aa9.43□□□□□ -0.9
USP28-203ENST00000537490 TMEM175Q9BSA9 504 aa9.43□□□□□ -0.9
USP28-203ENST00000537490 EIF2AQ9BY44 585 aaKnown RBP9.43□□□□□ -0.9
USP28-203ENST00000537490 MIOSQ9NXC5 875 aa9.43□□□□□ -0.9
USP28-203ENST00000537490 PCDHA12Q9UN75 941 aa9.43□□□□□ -0.9
USP28-203ENST00000537490 FAN1Q9Y2M0 1017 aa9.43□□□□□ -0.9
USP28-203ENST00000537490 IPPQ9Y573 584 aa9.43□□□□□ -0.9
USP28-203ENST00000537490 CNTNAP2Q9UHC6 1331 aa9.42□□□□□ -0.9
USP28-203ENST00000537490 CARNS1A5YM72 827 aa9.42□□□□□ -0.9
USP28-203ENST00000537490 TSPAN1O60635 241 aa9.42□□□□□ -0.9
USP28-203ENST00000537490 ERLIN2O94905 339 aa9.42□□□□□ -0.9
USP28-203ENST00000537490 LYPLA2O95372 231 aa9.42□□□□□ -0.9
USP28-203ENST00000537490 PDGFBP01127 241 aaPredicted RBP9.42□□□□□ -0.9
USP28-203ENST00000537490 SSBP05455 408 aaKnown RBP eCLIP9.42□□□□□ -0.9
USP28-203ENST00000537490 CNPP09543 421 aaKnown RBP9.42□□□□□ -0.9
USP28-203ENST00000537490 ITGA4P13612 1032 aa9.42□□□□□ -0.9
USP28-203ENST00000537490 ARL2P36404 184 aa9.42□□□□□ -0.9
USP28-203ENST00000537490 TXKP42681 527 aa9.42□□□□□ -0.9
USP28-203ENST00000537490 MTHFRP42898 656 aa9.42□□□□□ -0.9
USP28-203ENST00000537490 VCPP55072 806 aaKnown RBP9.42□□□□□ -0.9
USP28-203ENST00000537490 ST3GAL1Q11201 340 aa9.42□□□□□ -0.9
USP28-203ENST00000537490 CALCRLQ16602 461 aa9.42□□□□□ -0.9
USP28-203ENST00000537490 AMHR2Q16671 573 aa9.42□□□□□ -0.9
USP28-203ENST00000537490 ATAT1Q5SQI0 421 aa9.42□□□□□ -0.9
USP28-203ENST00000537490 KIAA1841Q6NSI8 718 aa9.42□□□□□ -0.9
USP28-203ENST00000537490 TMC5Q6UXY8 1006 aa9.42□□□□□ -0.9
USP28-203ENST00000537490 TAS1R1Q7RTX1 841 aa9.42□□□□□ -0.9
USP28-203ENST00000537490 ZBTB33Q86T24 672 aa9.42□□□□□ -0.9
USP28-203ENST00000537490 IFNLR1Q8IU57 520 aaPredicted RBP9.42□□□□□ -0.9
USP28-203ENST00000537490 SUGP1Q8IWZ8 645 aaKnown RBP9.42□□□□□ -0.9
USP28-203ENST00000537490 DIS3L2Q8IYB7 885 aaKnown RBP9.42□□□□□ -0.9
USP28-203ENST00000537490 CNNM3Q8NE01 707 aa9.42□□□□□ -0.9
USP28-203ENST00000537490 GTF3C6Q969F1 213 aa9.42□□□□□ -0.9
USP28-203ENST00000537490 RIPOR3Q96MK2 946 aa9.42□□□□□ -0.9
USP28-203ENST00000537490 FAM193BQ96PV7 902 aaPredicted RBP9.42□□□□□ -0.9
USP28-203ENST00000537490 MTMR9Q96QG7 549 aa9.42□□□□□ -0.9
USP28-203ENST00000537490 GAD1Q99259 594 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms