RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 OTUD6BQ8N6M0 293 aa15.46■□□□□ 0.07
USP44-203ENST00000537435 ZSWIM2Q8NEG5 633 aa15.46■□□□□ 0.07
USP44-203ENST00000537435 C7orf43Q8WVR3 580 aa15.46■□□□□ 0.07
USP44-203ENST00000537435 AGBL1Q96MI9 1066 aa15.46■□□□□ 0.07
USP44-203ENST00000537435 ACCSQ96QU6 501 aa15.46■□□□□ 0.07
USP44-203ENST00000537435 TXLNGYQ9BZA5 131 aa15.46■□□□□ 0.07
USP44-203ENST00000537435 EFCC1Q9HA90 598 aa15.46■□□□□ 0.07
USP44-203ENST00000537435 LRRC4CQ9HCJ2 640 aa15.46■□□□□ 0.07
USP44-203ENST00000537435 COL20A1Q9P218 1284 aa15.46■□□□□ 0.07
USP44-203ENST00000537435 CNOT8Q9UFF9 292 aaKnown RBP15.46■□□□□ 0.07
USP44-203ENST00000537435 FEM1BQ9UK73 627 aa15.46■□□□□ 0.07
USP44-203ENST00000537435 FAM187AA6NFU0 413 aa15.46■□□□□ 0.07
USP44-203ENST00000537435 TMEM110-MUSTN1A8MSY1 372 aa15.46■□□□□ 0.07
USP44-203ENST00000537435 P4HA2O15460 535 aa15.46■□□□□ 0.07
USP44-203ENST00000537435 MAPTP10636 758 aaKnown RBP15.46■□□□□ 0.07
USP44-203ENST00000537435 USP8P40818 1118 aa15.46■□□□□ 0.07
USP44-203ENST00000537435 RARRES1P49788 294 aa15.46■□□□□ 0.07
USP44-203ENST00000537435 C1orf220Q5T0J3 134 aa15.46■□□□□ 0.07
USP44-203ENST00000537435 MIGA2Q7L4E1 593 aa15.46■□□□□ 0.07
USP44-203ENST00000537435 JAMLQ86YT9 394 aa15.46■□□□□ 0.07
USP44-203ENST00000537435 IL31RAQ8NI17 732 aa15.46■□□□□ 0.07
USP44-203ENST00000537435 KRT35Q92764 455 aa15.46■□□□□ 0.07
USP44-203ENST00000537435 KAT2BQ92831 832 aa15.46■□□□□ 0.07
USP44-203ENST00000537435 KAT5Q92993 513 aa15.46■□□□□ 0.07
USP44-203ENST00000537435 SH2D3AQ9BRG2 576 aa15.46■□□□□ 0.07
USP44-203ENST00000537435 HSPBP1Q9NZL4 362 aa15.46■□□□□ 0.07
USP44-203ENST00000537435 CCPG1Q9ULG6 757 aa15.46■□□□□ 0.07
USP44-203ENST00000537435 DCDC2CA8MYV0 355 aa15.45■□□□□ 0.06
USP44-203ENST00000537435 PLS3P13797 630 aa15.45■□□□□ 0.06
USP44-203ENST00000537435 HSD17B4P51659 736 aa15.45■□□□□ 0.06
USP44-203ENST00000537435 MAGOHP61326 146 aaKnown RBP15.45■□□□□ 0.06
USP44-203ENST00000537435 GPC5P78333 572 aa15.45■□□□□ 0.06
USP44-203ENST00000537435 IFFO1Q0D2I5 559 aa15.45■□□□□ 0.06
USP44-203ENST00000537435 ALCAMQ13740 583 aa15.45■□□□□ 0.06
USP44-203ENST00000537435 DHX34Q14147 1143 aaKnown RBP15.45■□□□□ 0.06
USP44-203ENST00000537435 C11orf63Q6NUN7 778 aa15.45■□□□□ 0.06
USP44-203ENST00000537435 C12orf56Q8IXR9 622 aa15.45■□□□□ 0.06
USP44-203ENST00000537435 XXYLT1Q8NBI6 393 aa15.45■□□□□ 0.06
USP44-203ENST00000537435 PLEKHO2Q8TD55 490 aa15.45■□□□□ 0.06
USP44-203ENST00000537435 MAGOHBQ96A72 148 aaKnown RBP15.45■□□□□ 0.06
USP44-203ENST00000537435 VTI1AQ96AJ9 217 aa15.45■□□□□ 0.06
USP44-203ENST00000537435 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.45■□□□□ 0.06
USP44-203ENST00000537435 ZDHHC18Q9NUE0 388 aa15.45■□□□□ 0.06
USP44-203ENST00000537435 CHORDC1Q9UHD1 332 aaPredicted RBP15.45■□□□□ 0.06
USP44-203ENST00000537435 PFASO15067 1338 aa15.45■□□□□ 0.06
USP44-203ENST00000537435 SYNGAP1Q96PV0 1343 aa15.45■□□□□ 0.06
USP44-203ENST00000537435 MIF4GDA9UHW6 222 aaKnown RBP15.45■□□□□ 0.06
USP44-203ENST00000537435 DHX15O43143 795 aaKnown RBP15.45■□□□□ 0.06
USP44-203ENST00000537435 APBA3O96018 575 aa15.45■□□□□ 0.06
USP44-203ENST00000537435 MARCKSL1P49006 195 aa15.45■□□□□ 0.06
USP44-203ENST00000537435 TNIP1Q15025 636 aa15.45■□□□□ 0.06
USP44-203ENST00000537435 DLGAP5Q15398 846 aa15.45■□□□□ 0.06
USP44-203ENST00000537435 CLUL1Q15846 466 aa15.45■□□□□ 0.06
USP44-203ENST00000537435 UBL4BQ8N7F7 174 aa15.45■□□□□ 0.06
USP44-203ENST00000537435 VEZTQ9HBM0 779 aa15.45■□□□□ 0.06
USP44-203ENST00000537435 SNX24Q9Y343 169 aa15.45■□□□□ 0.06
USP44-203ENST00000537435 CNTNAP1P78357 1384 aa15.45■□□□□ 0.06
USP44-203ENST00000537435 GOLGB1Q14789 3259 aaKnown RBP15.45■□□□□ 0.06
USP44-203ENST00000537435 GMNCA6NCL1 334 aa15.44■□□□□ 0.06
USP44-203ENST00000537435 TULP1O00294 542 aaPredicted RBP15.44■□□□□ 0.06
USP44-203ENST00000537435 NFIBO00712 420 aa15.44■□□□□ 0.06
USP44-203ENST00000537435 PLSCR1O15162 318 aa15.44■□□□□ 0.06
USP44-203ENST00000537435 SGPL1O95470 568 aa15.44■□□□□ 0.06
USP44-203ENST00000537435 HSPA1LP34931 641 aa15.44■□□□□ 0.06
USP44-203ENST00000537435 PLTPP55058 493 aa15.44■□□□□ 0.06
USP44-203ENST00000537435 C18orf8Q96DM3 657 aa15.44■□□□□ 0.06
USP44-203ENST00000537435 CYFIP2Q96F07 1278 aa15.44■□□□□ 0.06
USP44-203ENST00000537435 PCDHB18PQ96TA0 734 aa15.44■□□□□ 0.06
USP44-203ENST00000537435 TMEM117Q9H0C3 514 aa15.44■□□□□ 0.06
USP44-203ENST00000537435 DEFB129Q9H1M3 183 aa15.44■□□□□ 0.06
USP44-203ENST00000537435 DBR1Q9UK59 544 aaKnown RBP15.44■□□□□ 0.06
USP44-203ENST00000537435 BRWD3Q6RI45 1802 aa15.44■□□□□ 0.06
USP44-203ENST00000537435 TRAPPC3O43617 180 aa15.44■□□□□ 0.06
USP44-203ENST00000537435 PHF2O75151 1096 aa15.44■□□□□ 0.06
USP44-203ENST00000537435 RTN2O75298 545 aa15.44■□□□□ 0.06
USP44-203ENST00000537435 COMTP21964 271 aa15.44■□□□□ 0.06
USP44-203ENST00000537435 CAP2P40123 477 aa15.44■□□□□ 0.06
USP44-203ENST00000537435 MXI1P50539 228 aa15.44■□□□□ 0.06
USP44-203ENST00000537435 EIF3BP55884 814 aaKnown RBP15.44■□□□□ 0.06
USP44-203ENST00000537435 MESDQ14696 234 aa15.44■□□□□ 0.06
USP44-203ENST00000537435 SPDYCQ5MJ68 293 aa15.44■□□□□ 0.06
USP44-203ENST00000537435 RSBN1LQ6PCB5 846 aaPredicted RBP15.44■□□□□ 0.06
USP44-203ENST00000537435 TRMT1LQ7Z2T5 733 aaKnown RBP15.44■□□□□ 0.06
USP44-203ENST00000537435 HAUS6Q7Z4H7 955 aa15.44■□□□□ 0.06
USP44-203ENST00000537435 SUPT20HQ8NEM7 779 aa15.44■□□□□ 0.06
USP44-203ENST00000537435 EPS8L1Q8TE68 723 aa15.44■□□□□ 0.06
USP44-203ENST00000537435 ZSWIM1Q9BR11 485 aa15.44■□□□□ 0.06
USP44-203ENST00000537435 TMEM39BQ9GZU3 492 aa15.44■□□□□ 0.06
USP44-203ENST00000537435 RASAL2Q9UJF2 1139 aa15.44■□□□□ 0.06
USP44-203ENST00000537435 MYH11P35749 1972 aa15.44■□□□□ 0.06
USP44-203ENST00000537435 ZNF536O15090 1300 aa15.44■□□□□ 0.06
USP44-203ENST00000537435 RPTORQ8N122 1335 aa15.44■□□□□ 0.06
USP44-203ENST00000537435 TMEM150BA6NC51 233 aa15.43■□□□□ 0.06
USP44-203ENST00000537435 GOLGA8IPA6NC78 632 aa15.43■□□□□ 0.06
USP44-203ENST00000537435 GOLGA8JA6NMD2 632 aa15.43■□□□□ 0.06
USP44-203ENST00000537435 KIAA0391O15091 583 aaKnown RBP15.43■□□□□ 0.06
USP44-203ENST00000537435 ATMINO43313 823 aaPredicted RBP15.43■□□□□ 0.06
USP44-203ENST00000537435 ICAM1P05362 532 aa15.43■□□□□ 0.06
USP44-203ENST00000537435 QARSP47897 775 aaKnown RBP15.43■□□□□ 0.06
USP44-203ENST00000537435 TCEAL1Q15170 157 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms