RNA–Protein interactions for RNA: ENST00000537403.5

SEC23A-202, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 4,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-202ENST00000537403 PPP4CP60510 307 aa4.37□□□□□ -1.71
SEC23A-202ENST00000537403 DYNLT1P63172 113 aa4.37□□□□□ -1.71
SEC23A-202ENST00000537403 TAF1CQ15572 869 aaPredicted RBP4.37□□□□□ -1.71
SEC23A-202ENST00000537403 C10orf76Q5T2E6 689 aa4.37□□□□□ -1.71
SEC23A-202ENST00000537403 C9orf131Q5VYM1 1079 aa4.37□□□□□ -1.71
SEC23A-202ENST00000537403 C16orf86Q6ZW13 317 aa4.37□□□□□ -1.71
SEC23A-202ENST00000537403 CYFIP1Q7L576 1253 aa4.37□□□□□ -1.71
SEC23A-202ENST00000537403 TMEM35BQ8NCS4 154 aa4.37□□□□□ -1.71
SEC23A-202ENST00000537403 RNF139Q8WU17 664 aa4.37□□□□□ -1.71
SEC23A-202ENST00000537403 PANX2Q96RD6 677 aa4.37□□□□□ -1.71
SEC23A-202ENST00000537403 MTRQ99707 1265 aa4.37□□□□□ -1.71
SEC23A-202ENST00000537403 KRTAP3-3Q9BYR6 98 aa4.37□□□□□ -1.71
SEC23A-202ENST00000537403 KRTAP3-2Q9BYR7 98 aa4.37□□□□□ -1.71
SEC23A-202ENST00000537403 CCSER1Q9C0I3 900 aa4.37□□□□□ -1.71
SEC23A-202ENST00000537403 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.37□□□□□ -1.71
SEC23A-202ENST00000537403 CPSF3Q9UKF6 684 aaKnown RBP4.37□□□□□ -1.71
SEC23A-202ENST00000537403 PCDHA13Q9Y5I0 950 aa4.37□□□□□ -1.71
SEC23A-202ENST00000537403 TAF6LQ9Y6J9 622 aa4.37□□□□□ -1.71
SEC23A-202ENST00000537403 CDK5RAP2Q96SN8 1893 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 BUB1BO60566 1050 aaPredicted RBP4.36□□□□□ -1.71
SEC23A-202ENST00000537403 MFAP3LO75121 409 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 HEXIM1O94992 359 aaKnown RBP4.36□□□□□ -1.71
SEC23A-202ENST00000537403 KRT1P04264 644 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 NR3C2P08235 984 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 ZNF131P52739 623 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 PLTPP55058 493 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 ANTXR2P58335 489 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 PDIA5Q14554 519 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 ARID5BQ14865 1188 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 HAUS6Q7Z4H7 955 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 MICAL1Q8TDZ2 1067 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 RILPQ96NA2 401 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 RUNDC3BQ96NL0 473 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 SENP2Q9HC62 589 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 EPB41L5Q9HCM4 733 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 MYOZ2Q9NPC6 264 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.36□□□□□ -1.71
SEC23A-202ENST00000537403 ADAM22Q9P0K1 906 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 RNF14Q9UBS8 474 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 SLC9A2Q9UBY0 812 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 POC1B-GALNT4F8VUJ3 575 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 PRPSAP2O60256 369 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 PPFIA4O75335 1185 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 GGPS1O95749 300 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 CALRP27797 417 aaKnown RBP4.36□□□□□ -1.71
SEC23A-202ENST00000537403 GBP1P32455 592 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 ATP1A2P50993 1020 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 HDLBPQ00341 1268 aaKnown RBP4.36□□□□□ -1.71
SEC23A-202ENST00000537403 PDE1BQ01064 536 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 TNFAIP2Q03169 654 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 NAALADL2Q58DX5 795 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 TXNRD3Q86VQ6 643 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 CCDC13Q8IYE1 715 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 DNAAF3Q8N9W5 541 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 PPFIBP2Q8ND30 876 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 CDKL2Q92772 493 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 STMN2Q93045 179 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 SAAL1Q96ER3 474 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 ZBED2Q9BTP6 218 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 C2orf40Q9H1Z8 148 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 IL25Q9H293 177 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 JPH1Q9HDC5 661 aaPredicted RBP4.36□□□□□ -1.71
SEC23A-202ENST00000537403 HACL1Q9UJ83 578 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 MYH13Q9UKX3 1938 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 DDX60LQ5H9U9 1706 aaKnown RBP4.36□□□□□ -1.71
SEC23A-202ENST00000537403 RASSF10A6NK89 507 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 MCF2LO15068 1137 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 PFDN6O15212 129 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 HUS1O60921 280 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 EYA4O95677 639 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 ACTN1P12814 892 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 XPAP23025 273 aaPredicted RBP4.36□□□□□ -1.71
SEC23A-202ENST00000537403 VAMP7P51809 220 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 RPS6KA2Q15349 733 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 ZNF699Q32M78 642 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 GKAP1Q5VSY0 366 aaPredicted RBP4.36□□□□□ -1.71
SEC23A-202ENST00000537403 MFSD14CQ5VZR4 134 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 CYP4F22Q6NT55 531 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 CCDC62Q6P9F0 684 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 SARM1Q6SZW1 724 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 TMEM270Q6UE05 265 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 RHOT2Q8IXI1 618 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 C10orf67Q8IYJ2 551 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 KCTD6Q8NC69 237 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 AGBL3Q8NEM8 1001 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 PPP4R1Q8TF05 950 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 MCUR1Q96AQ8 359 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 PRMT6Q96LA8 375 aaPredicted RBP4.36□□□□□ -1.71
SEC23A-202ENST00000537403 PHF20Q9BVI0 1012 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 TRIM9Q9C026 710 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 POLR3FQ9H1D9 316 aaPredicted RBP4.36□□□□□ -1.71
SEC23A-202ENST00000537403 POLLQ9UGP5 575 aa4.36□□□□□ -1.71
SEC23A-202ENST00000537403 DYNC1LI2O43237 492 aaPredicted RBP4.35□□□□□ -1.71
SEC23A-202ENST00000537403 ZRANB2O95218 330 aaKnown RBP eCLIP4.35□□□□□ -1.71
SEC23A-202ENST00000537403 ECEL1O95672 775 aa4.35□□□□□ -1.71
SEC23A-202ENST00000537403 INHBAP08476 426 aa4.35□□□□□ -1.71
SEC23A-202ENST00000537403 TRIM49P0CI25 452 aa4.35□□□□□ -1.71
SEC23A-202ENST00000537403 TRIM49CP0CI26 452 aa4.35□□□□□ -1.71
SEC23A-202ENST00000537403 RPS12P25398 132 aaKnown RBP4.35□□□□□ -1.71
SEC23A-202ENST00000537403 NMT1P30419 496 aaKnown RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms