RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 KBTBD3Q8NAB2 608 aa10.92□□□□□ -0.66
CPSF7-217ENST00000537162 GAB3Q8WWW8 586 aa10.92□□□□□ -0.66
CPSF7-217ENST00000537162 FAM3CQ92520 227 aa10.92□□□□□ -0.66
CPSF7-217ENST00000537162 KIF1BPQ96EK5 621 aa10.92□□□□□ -0.66
CPSF7-217ENST00000537162 RPS6KC1Q96S38 1066 aa10.92□□□□□ -0.66
CPSF7-217ENST00000537162 SCUBE2Q9NQ36 999 aa10.92□□□□□ -0.66
CPSF7-217ENST00000537162 PKD2L1Q9P0L9 805 aa10.92□□□□□ -0.66
CPSF7-217ENST00000537162 PCDHGA5Q9Y5G8 931 aa10.92□□□□□ -0.66
CPSF7-217ENST00000537162 PDCD11Q14690 1871 aaKnown RBP10.91□□□□□ -0.66
CPSF7-217ENST00000537162 A0A0U1RQF3 1178 aa10.91□□□□□ -0.66
CPSF7-217ENST00000537162 TGM5O43548 720 aa10.91□□□□□ -0.66
CPSF7-217ENST00000537162 DHX16O60231 1041 aaKnown RBP10.91□□□□□ -0.66
CPSF7-217ENST00000537162 RPP40O75818 363 aaKnown RBP10.91□□□□□ -0.66
CPSF7-217ENST00000537162 VTNP04004 478 aa10.91□□□□□ -0.66
CPSF7-217ENST00000537162 FGFR4P22455 802 aa10.91□□□□□ -0.66
CPSF7-217ENST00000537162 UAP1L1Q3KQV9 507 aa10.91□□□□□ -0.66
CPSF7-217ENST00000537162 FAM43BQ6ZT52 329 aaPredicted RBP10.91□□□□□ -0.66
CPSF7-217ENST00000537162 GLYCTKQ8IVS8 523 aa10.91□□□□□ -0.66
CPSF7-217ENST00000537162 ING5Q8WYH8 240 aa10.91□□□□□ -0.66
CPSF7-217ENST00000537162 AMNQ9BXJ7 453 aa10.91□□□□□ -0.66
CPSF7-217ENST00000537162 CLMPQ9H6B4 373 aa10.91□□□□□ -0.66
CPSF7-217ENST00000537162 CCDC86Q9H6F5 360 aaKnown RBP10.91□□□□□ -0.66
CPSF7-217ENST00000537162 TOMM22Q9NS69 142 aa10.91□□□□□ -0.66
CPSF7-217ENST00000537162 ZDHHC7Q9NXF8 308 aa10.91□□□□□ -0.66
CPSF7-217ENST00000537162 MAP3K20Q9NYL2 800 aaKnown RBP10.91□□□□□ -0.66
CPSF7-217ENST00000537162 COL12A1Q99715 3063 aa10.91□□□□□ -0.66
CPSF7-217ENST00000537162 GCOM1H8Y6P7 765 aaPredicted RBP10.9□□□□□ -0.66
CPSF7-217ENST00000537162 TK2O00142 265 aa10.9□□□□□ -0.66
CPSF7-217ENST00000537162 MAN2B1O00754 1011 aa10.9□□□□□ -0.66
CPSF7-217ENST00000537162 ATXN7O15265 892 aaPredicted RBP10.9□□□□□ -0.66
CPSF7-217ENST00000537162 GAS2O43903 313 aaKnown RBP10.9□□□□□ -0.66
CPSF7-217ENST00000537162 DDHD2O94830 711 aa10.9□□□□□ -0.66
CPSF7-217ENST00000537162 CT47B1P0C2W7 299 aaPredicted RBP10.9□□□□□ -0.66
CPSF7-217ENST00000537162 POLR2MP0CAP2 368 aa10.9□□□□□ -0.66
CPSF7-217ENST00000537162 AFF1P51825 1210 aaKnown RBP10.9□□□□□ -0.66
CPSF7-217ENST00000537162 FAM193AP78312 1265 aa10.9□□□□□ -0.66
CPSF7-217ENST00000537162 SIM1P81133 766 aaPredicted RBP10.9□□□□□ -0.66
CPSF7-217ENST00000537162 PTGDRQ13258 359 aa10.9□□□□□ -0.66
CPSF7-217ENST00000537162 GRM2Q14416 872 aa10.9□□□□□ -0.66
CPSF7-217ENST00000537162 TANGO2Q6ICL3 276 aa10.9□□□□□ -0.66
CPSF7-217ENST00000537162 LILRA6Q6PI73 481 aa10.9□□□□□ -0.66
CPSF7-217ENST00000537162 NPAS3Q8IXF0 933 aa10.9□□□□□ -0.66
CPSF7-217ENST00000537162 ZNF668Q96K58 619 aaPredicted RBP10.9□□□□□ -0.66
CPSF7-217ENST00000537162 B3GALT6Q96L58 329 aa10.9□□□□□ -0.66
CPSF7-217ENST00000537162 ZKSCAN3Q9BRR0 538 aa10.9□□□□□ -0.66
CPSF7-217ENST00000537162 HCFC1R1Q9NWW0 138 aa10.9□□□□□ -0.66
CPSF7-217ENST00000537162 ANAPC4Q9UJX5 808 aa10.9□□□□□ -0.66
CPSF7-217ENST00000537162 INPP5FQ9Y2H2 1132 aa10.9□□□□□ -0.66
CPSF7-217ENST00000537162 F5P12259 2224 aa10.9□□□□□ -0.66
CPSF7-217ENST00000537162 ASCC3Q8N3C0 2202 aaKnown RBP10.9□□□□□ -0.66
CPSF7-217ENST00000537162 NUP205Q92621 2012 aa10.89□□□□□ -0.67
CPSF7-217ENST00000537162 PATE3B3GLJ2 98 aa10.89□□□□□ -0.67
CPSF7-217ENST00000537162 B4E1Z4 1266 aa10.89□□□□□ -0.67
CPSF7-217ENST00000537162 ZMYND10O75800 440 aa10.89□□□□□ -0.67
CPSF7-217ENST00000537162 STAM2O75886 525 aa10.89□□□□□ -0.67
CPSF7-217ENST00000537162 SOD2P04179 222 aa10.89□□□□□ -0.67
CPSF7-217ENST00000537162 URODP06132 367 aa10.89□□□□□ -0.67
CPSF7-217ENST00000537162 ZSCAN20P17040 1043 aaPredicted RBP10.89□□□□□ -0.67
CPSF7-217ENST00000537162 HDAC7Q8WUI4 952 aa10.89□□□□□ -0.67
CPSF7-217ENST00000537162 HERC2P3Q9BVR0 1158 aa10.89□□□□□ -0.67
CPSF7-217ENST00000537162 DUSP15Q9H1R2 295 aaPredicted RBP10.89□□□□□ -0.67
CPSF7-217ENST00000537162 PLEKHA4Q9H4M7 779 aa10.89□□□□□ -0.67
CPSF7-217ENST00000537162 RXFP1Q9HBX9 757 aa10.89□□□□□ -0.67
CPSF7-217ENST00000537162 TMEM9BQ9NQ34 198 aa10.89□□□□□ -0.67
CPSF7-217ENST00000537162 DPP7Q9UHL4 492 aa10.89□□□□□ -0.67
CPSF7-217ENST00000537162 ANKRD17O75179 2603 aaKnown RBP10.89□□□□□ -0.67
CPSF7-217ENST00000537162 ZBTB42B2RXF5 422 aa10.88□□□□□ -0.67
CPSF7-217ENST00000537162 F8W810 466 aa10.88□□□□□ -0.67
CPSF7-217ENST00000537162 IPO8O15397 1037 aaKnown RBP10.88□□□□□ -0.67
CPSF7-217ENST00000537162 ECI2O75521 394 aa10.88□□□□□ -0.67
CPSF7-217ENST00000537162 CAVIN2O95810 425 aa10.88□□□□□ -0.67
CPSF7-217ENST00000537162 APC2O95996 2303 aa10.88□□□□□ -0.67
CPSF7-217ENST00000537162 CCDC192P0DO97 292 aa10.88□□□□□ -0.67
CPSF7-217ENST00000537162 RPL17P18621 184 aaKnown RBP10.88□□□□□ -0.67
CPSF7-217ENST00000537162 CCNE1P24864 410 aa10.88□□□□□ -0.67
CPSF7-217ENST00000537162 HOXA6P31267 233 aa10.88□□□□□ -0.67
CPSF7-217ENST00000537162 CREB5Q02930 508 aa10.88□□□□□ -0.67
CPSF7-217ENST00000537162 RNASELQ05823 741 aaKnown RBP10.88□□□□□ -0.67
CPSF7-217ENST00000537162 PLK5Q496M5 336 aa10.88□□□□□ -0.67
CPSF7-217ENST00000537162 HSP90AB4PQ58FF6 505 aa10.88□□□□□ -0.67
CPSF7-217ENST00000537162 NOMO2Q5JPE7 1267 aa10.88□□□□□ -0.67
CPSF7-217ENST00000537162 VPS53Q5VIR6 699 aa10.88□□□□□ -0.67
CPSF7-217ENST00000537162 ELMSAN1Q6PJG2 1045 aa10.88□□□□□ -0.67
CPSF7-217ENST00000537162 RAB44Q7Z6P3 723 aaPredicted RBP10.88□□□□□ -0.67
CPSF7-217ENST00000537162 STAG2Q8N3U4 1231 aa10.88□□□□□ -0.67
CPSF7-217ENST00000537162 DNASE1L2Q92874 299 aa10.88□□□□□ -0.67
CPSF7-217ENST00000537162 MCRS1Q96EZ8 462 aa10.88□□□□□ -0.67
CPSF7-217ENST00000537162 ZC3H10Q96K80 434 aaKnown RBP10.88□□□□□ -0.67
CPSF7-217ENST00000537162 TTC14Q96N46 770 aa10.88□□□□□ -0.67
CPSF7-217ENST00000537162 MARCH5Q9NX47 278 aa10.88□□□□□ -0.67
CPSF7-217ENST00000537162 PIAS3Q9Y6X2 628 aa10.88□□□□□ -0.67
CPSF7-217ENST00000537162 PCNX2A6NKB5 2137 aa10.88□□□□□ -0.67
CPSF7-217ENST00000537162 BCLAF3A2AJT9 711 aaKnown RBP10.87□□□□□ -0.67
CPSF7-217ENST00000537162 NRP1O14786 923 aa10.87□□□□□ -0.67
CPSF7-217ENST00000537162 CCL16O15467 120 aa10.87□□□□□ -0.67
CPSF7-217ENST00000537162 EXTL3O43909 919 aa10.87□□□□□ -0.67
CPSF7-217ENST00000537162 OFD1O75665 1012 aa10.87□□□□□ -0.67
CPSF7-217ENST00000537162 EFEMP2O95967 443 aa10.87□□□□□ -0.67
CPSF7-217ENST00000537162 ITGB5P18084 799 aa10.87□□□□□ -0.67
CPSF7-217ENST00000537162 FCARP24071 287 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms